Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,538,109 | 0 | A | C | 42.7% | 128.4 / 22.5 | 76 | G219G (GGT→GGG) | nanM | N‑acetylneuraminic acid mutarotase |
Reads supporting (aligned to +/- strand): ref base A (36/7); new base C (0/32); total (36/40) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.93e-14 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TCCCCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTT > NC_000913/4537961‑4538258 | tCCCCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCAcc > 2:942715/1‑151 (MQ=255) cccGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCtt < 2:253772/151‑1 (MQ=255) cccGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCtt < 2:672655/151‑1 (MQ=255) gCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCttt < 2:821054/149‑1 (MQ=255) cAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTAt < 2:581671/150‑1 (MQ=255) aaaCCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTc > 1:862197/1‑150 (MQ=255) aaCCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTcac < 2:545361/151‑1 (MQ=255) cGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAAc > 1:229190/1‑151 (MQ=255) gCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAAcc > 1:655650/1‑151 (MQ=255) cAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAAccgc > 1:106700/1‑151 (MQ=255) tACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACcgccgc > 1:548091/1‑150 (MQ=255) aCGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCAc > 2:889801/1‑151 (MQ=255) cGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTAAAATTATTCCCGGTAAAATAAATTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGTTTTT‑ATCCCCTTTATTCACAACCGCCGCAcc < 1:284950/151‑1 (MQ=255) ccATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCAcc > 1:405746/1‑149 (MQ=255) cTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGt > 1:346835/1‑151 (MQ=255) tGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGtt > 1:235208/1‑151 (MQ=255) gaCGGGAGCAAGTTTATTCCATTTAAAATTATTCCCGGTAAAATCAATTTAAAATACGGCATCCGTTCGCAACCCTGGTTTGG‑TTT‑CGCCATTAATAAGCCAGGTTTT‑ACCCCTTTTATTCACAACCGCCGCACCAGCCGTTCCGTa < 1:474794/147‑1 (MQ=255) aCGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAgg > 2:420153/1‑151 (MQ=255) aaccTTTTTCCTTTTAAAATTTTTCCCGGTAAAACAAAGTCAAATTCCGCCACCCGTTCCCAATCC‑GGTTTGGCCTC‑CGCCTTTAAAAAGCCAGTTTTT‑ACCCCTTTTTTCCACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCg < 2:649664/148‑1 (MQ=255) aGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGc > 1:431108/1‑151 (MQ=255) cTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGcc > 2:413335/1‑150 (MQ=255) ttCCATTTAAAATTATTACCGGTAAAATCAAGTTCAAATACGGCTCCCTTTCGCAATCCTGGTTTGG‑CTT‑CCCCATAAATAACCCAGGTTTT‑ACCCCCTTTATTCCCCCCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCg < 2:678605/150‑1 (MQ=255) tCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGt > 2:584278/1‑150 (MQ=255) cATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAAc > 2:335342/1‑151 (MQ=255) aTTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACt > 1:895194/1‑151 (MQ=255) aaaTTATTACCGGTAAAATCAATTTCAAATACGGCACCCTTTCGCAATCCTGTTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCCCCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACCCCAtt < 1:521024/151‑1 (MQ=255) aaTTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTg > 1:906314/1‑151 (MQ=255) aaTTATTACCGGTAAAATCAATTTAAAATCCGGCTCCCGTTCGCAATCCTGTTTTGG‑CTT‑CGCCATTAATAGGCCGGTTTTT‑ATCCCCTTTATCCACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTcc < 2:762450/147‑1 (MQ=255) aaTTATACCCGGTCAAATCAAGTTGAAATTCGCCTTCCGTTCAGTGCTGTGTTTTGG‑CTT‑CGCAATTATTAATCCGGTTTTT‑ATCATTTTTATTCACAGCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCa < 1:874229/148‑1 (MQ=255) ttattaCCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCt > 1:200099/1‑151 (MQ=255) tattaCCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCtg > 1:476985/1‑151 (MQ=255) ccGGTAAAATAAAGTTAAAATACGGCACCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCCCCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTgtgt < 1:940831/149‑1 (MQ=255) ccGGGGAAATCAAGTTCAAATACGGCACCCGTTCGCAATCCGGGTTTGG‑TTC‑CGCCATTAATAAGCCAGGTTTT‑TTCCCCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCtgt < 1:669041/147‑1 (MQ=255) cGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTg > 2:27464/1‑150 (MQ=255) ggTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTg > 2:825964/1‑149 (MQ=255) aaataaatTTAAAATCCGGCCCCCTTCCGCAATCCTGTTTGGG‑CTC‑CGCCATTAATAACCCGGTTTTT‑ACCCCCTTTATCCCCAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAggg < 2:347239/149‑1 (MQ=255) aaaTAAAGTTAAAATCCGCCACCCTTCCCAAATCTTGGTTTGC‑TTT‑CCCCATAAATACCCCGGGTTTT‑ATCCCTTTTATCCCAACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAgg < 2:636308/148‑1 (MQ=255) aaTCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATc > 1:311231/1‑151 (MQ=255) aTCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATc > 2:606125/1‑150 (MQ=255) cAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaa > 1:740996/1‑150 (MQ=255) cAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACC‑CCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaaa > 2:53506/1‑150 (MQ=255) aaGTTAAAATCCGGCACCCGTTCGCAACCCT‑GTTTGG‑CTTCCCCCATTAATAAGCGAGGTTTT‑ACCCCTTTTATCCAAAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaaaa < 2:161144/151‑1 (MQ=255) aaGTTAAAATACGGCACCGGTTCGCACTCCTGTTTTGG‑CTC‑CGCCATAAAT‑AGCCCGGTTTTAATCCCTTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaaaa < 1:11745/151‑1 (MQ=255) ttCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGac > 1:930365/1‑151 (MQ=255) aaaTACGGCATCCGTTCGCAATCCTGGTTTGG‑CTC‑CGCCATTAATAAGCCAGTTTTT‑ATCCCCTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGacaac < 1:897923/151‑1 (MQ=255) ggCACCCGTCCGCAATCCTGTTTTGG‑CTC‑CCCCATTAATAAGCCAGGTTTT‑ATCCCCTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGaaa < 1:847814/150‑1 (MQ=255) gccATCCTTTCCCAATCCTGGTTTGC‑TTT‑CGCCATTAATAAGCCAGTTTTT‑ATCCCCTTTATTCACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGaaa < 1:200508/148‑1 (MQ=255) acccttcccaattCCTGGTTTGC‑CTC‑CGCCATAAATAACCCTGTTTTT‑ATCCCTTTTTTCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACtt < 2:994758/138‑1 (MQ=255) cctttCGCAATCTTGTTTTGC‑CTC‑CCCCATAAAAAAGCCAGTTTTT‑ACCCCTTTTATCCCCAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACtt < 2:919879/145‑1 (MQ=255) gTTCGCAATCCTGTTTTGC‑CTC‑CCCCTTTAATACGCCGGTTTTT‑ACCCCTTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTg < 1:914054/150‑1 (MQ=255) ttCGCAATCC‑GGTTTGG‑CTTCCGCCATTAATAAGCCGGGTTTA‑ACCCCTTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTg < 1:278704/149‑1 (MQ=255) ttctcaccccggTTTTG‑CTTCCGCCATAAAAAAGCCAGGTTTT‑AACGCTTTTTTTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTa < 2:871046/136‑1 (MQ=255) cgcaccccttttttGC‑CTC‑CCCCTTTAATAAGCCGTTTTTT‑ATCCCTTTTTTCCAAACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTgaa < 2:655596/138‑1 (MQ=255) cGCAACCTTGTTTTGT‑CTT‑CCCCATAAATAACCAATGTTTT‑ACCCCTTTTTTCCAAATCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACtt < 2:915199/143‑1 (MQ=255) cccaaccTTGTTTTG‑CTTCCGCCATAAAAAGGCAAGTTTTT‑ACCCCCTTTATCCAAACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTgaaga < 2:607697/146‑1 (MQ=255) cAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTgaagaa > 2:514828/1‑150 (MQ=255) aaTCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAaat > 1:411772/1‑151 (MQ=255) ccTGTTTTGC‑CTC‑CCCCATAAATAACCCAGTTTTT‑ATCCCTTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAaata < 1:965070/149‑1 (MQ=255) ccTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAaataat > 2:354274/1‑151 (MQ=255) ccTGGTTTGG‑CTC‑CCCCATTAAAAAGCCAGTTTTT‑ATCCCTTTTATTCACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAaat < 1:927608/148‑1 (MQ=255) ttttG‑CTTCCGCCATTATAAACCCAGTTTTT‑ATCCCCTTTATCCAAAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAAtctt < 2:511410/150‑1 (MQ=255) tt‑CCCCATTAAAAAGCCGGTTTTT‑ACCCCCTTTATCCCCAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCtt < 1:713973/149‑1 (MQ=255) cATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTc > 1:601449/1‑151 (MQ=255) aTTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTc > 2:319470/1‑150 (MQ=255) taaaaaggCCAGTTTTT‑ATCCCCTTTATACACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTc < 1:459305/142‑1 (MQ=255) aataaGCCATGTTTT‑ATCCCCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTc < 2:361762/147‑1 (MQ=255) ataaGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAAt > 1:532710/1‑151 (MQ=255) cgagttttt‑GTCCCCTTTATCCACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATat < 2:107225/143‑2 (MQ=255) ccAGTTTTT‑ATCCCCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGt < 1:101027/149‑1 (MQ=255) cAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTg > 1:539330/1‑149 (MQ=255) ggttttt‑ATCCCCTTTATCCACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGc < 2:134667/148‑1 (MQ=255) gttttt‑ATCCCTTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCa < 1:410658/149‑1 (MQ=255) ggTTTT‑CTCACCTTTTTACACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTg < 2:30984/147‑1 (MQ=255) tttt‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCAtt > 1:552688/1‑151 (MQ=255) tCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGAttt > 1:841004/1‑151 (MQ=255) cACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGAtttt > 1:516565/1‑151 (MQ=255) | TCCCCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑CTT‑CGCCATTAATAAGCCAGGTTTT‑ATCACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTT > NC_000913/4537961‑4538258 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |