Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,238,049 | 0 | A | G | 42.9% | 119.8 / 21.7 | 77 | E139G (GAA→GGA) | yjbH | DUF940 family extracellular polysaccharide protein |
Reads supporting (aligned to +/- strand): ref base A (7/37); new base G (33/0); total (40/37) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.75e-15 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGCTACAAACAGGCGGG > NC_000913/4237900‑4238199 | gTACAGCAGCATCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGaa < 2:947792/151‑1 (MQ=255) gcagcGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGTTTTGTGCGGGATATCt > 1:769062/1‑151 (MQ=255) agcGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCttg < 1:803048/151‑1 (MQ=255) agcGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGTTTGTTGGGGGATATCtt > 2:776782/1‑150 (MQ=255) gTCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGGTATCGGC‑GG‑GAC‑GGGGGGGTTTGATGCGGGATATCtt > 2:337453/1‑147 (MQ=255) ttCTCTGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑CGGGGTGTTTGATGCGGGATATATTTTT‑TCCAG‑G‑aaa > 2:203855/1‑150 (MQ=255) tctGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGTTTTATGCGGGATATATTGTT‑TGCAG‑C‑AAA‑gac > 1:296386/1‑148 (MQ=255) ctGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑Gcc < 1:788446/149‑1 (MQ=255) ctGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGTTTGGTGGGGGATATTTTTTT‑GGCCG‑C‑AAA‑Acc > 1:443607/1‑149 (MQ=255) gATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGc < 1:891457/151‑1 (MQ=255) aTCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGTTTTATGCGGGATATCTTTTT‑GCCCG‑C‑AAA‑ACCCggggg > 1:672244/1‑149 (MQ=255) cAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCg < 2:850581/150‑1 (MQ=255) aaCGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGTTTGGTGCGGGATATCTTGTT‑GCCCG‑C‑AAA‑ACCTGGGGGcc > 1:465635/1‑147 (MQ=255) aCGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGTTTGGTGGGGGATATTTTTTT‑TGCAGCC‑AAA‑ACCTGGGGGCGGt > 2:888531/1‑149 (MQ=255) aCGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGGTTTATGGGGGATATCTTTTT‑TCCCG‑C‑AAA‑GCCTGGGGGGCg > 2:12967/1‑147 (MQ=255) gTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGGTATCGGC‑GG‑GAA‑GGGGGCGTTTTGTGGGGGATAACTTTTT‑GGCCG‑C‑AAA‑ACCCGGGGGGCggttgg > 2:560446/1‑145 (MQ=255) tataAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGTTTTATTCGGGATATCTTTTT‑TGCCG‑C‑CAA‑ACCCGGGGGGCGtttggtt > 1:400294/1‑146 (MQ=255) ataaagataaagCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGGTTTATGCGGGATATCTTTTT‑TGCCG‑C‑AAA‑ACCCGGGGGGCGGTCGAttt > 2:890477/1‑151 (MQ=255) agataaagCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGCGTTTTGTGGGGGATATTTTGTT‑GCCCG‑C‑CAA‑ACCCGGGGGGCGGTCGGtttt > 2:785330/1‑148 (MQ=255) ataaagCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGTTTTTTGCGGGATATCTTGTT‑GGCCG‑C‑AAA‑ACCTGGGGGCCGGTCGGTTTTAcac > 2:347935/1‑148 (MQ=255) ataaagCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAA‑GGGGGTGGTTTGTGGGGGATATTTTTTT‑GGCCG‑C‑AAA‑ACCTGGGGGGCGTTCGGttttttgc > 2:425078/1‑146 (MQ=255) taaagCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGTTTTGTGCGGGATATCTTTTT‑GGCCG‑C‑AAA‑ACCTGGGGGGCGTTCGGTTTTACg > 1:195095/1‑148 (MQ=255) aaagCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGCGGG‑TCC‑GGGGCGGTTTG‑TGGGGGATATCCTGTT‑GGCAG‑C‑AAA‑GCCTGGGGGGCGTTCGGTTTTTCGCTc > 2:282151/1‑150 (MQ=255) aagCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGGTATCGGC‑GG‑GAC‑GGGGGTGTTTGGTGGGGGATATTTTTTT‑TGCCG‑G‑AAA‑ACCTGGGGGGCGGTTGGTTTTTTGCTCgg > 2:853495/1‑151 (MQ=255) agCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GACGGGGGCGGTTTG‑TGGGGGATATCTTGTT‑GGCCG‑CAAAA‑GCCGGGGGGCGGTTGGTTTTTA‑GCTCgg > 2:213061/1‑150 (MQ=255) agCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGTTTTGTGGGGGATATTTTTTT‑GGCAG‑C‑AAA‑ACCTGGGGGGCGGTCGGTTTTTCGCTccg > 2:687063/1‑148 (MQ=255) agCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGGGGTTTGTGCGGGGTATTTTGTT‑GGCAG‑G‑CAA‑GACTGGGGGGCGGTTGGtttttagacc > 2:500023/1‑142 (MQ=255) ccTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGTTTGATGCGGGATATCTTGTT‑GCCCG‑C‑AAA‑ACCCGGGGGGCGGTCGATTTTACGCCCGGcc > 1:889400/1‑150 (MQ=255) cAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGGTATCGGC‑GG‑GAC‑GGGGGCGTTTTGTGGGGGAAATCTTGTT‑GCCCG‑C‑CAA‑AGCTGGGGGGCGTTTGATTTTTTGCTCGGGCTGGGGTtgggg > 2:740206/1‑151 (MQ=255) cAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCctgggctggg < 2:402162/149‑1 (MQ=255) cAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCctgggctggg < 1:967481/149‑1 (MQ=255) aaaCTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGt < 1:875122/151‑1 (MQ=255) aaaCTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGt < 1:801402/151‑1 (MQ=255) aaCTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTa < 1:407770/151‑1 (MQ=255) cGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑CGGGCTGTTTTGTGCGGGATATCTTGTT‑GCCAG‑C‑AAA‑ACCTGGGGGCCGTTTGATTTTTCGCTCGGCCTTGGGTgggggggttt > 1:869678/1‑144 (MQ=255) gtgGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGGGCGGGGTATCGGC‑GGTTCC‑GGGGCTGTTGTAT‑CGGGATAACCTTTT‑GTCAG‑C‑AAACGCCGGGGGCCCGTT‑GATTTTTCGCTTCGCCCGGGGGGGGGGGGCTTGGGGAcc > 2:505187/1‑151 (MQ=255) gggAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGGCGTTTTATGCGGGATATTTTGTT‑GCCCG‑C‑AAA‑ACCCGGGGGGCGGTCGGTTTTTCCCCCTGCCTGGGCTGGGGGGATTTTGGCAcc > 2:140360/1‑149 (MQ=255) gAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCg < 2:732786/151‑1 (MQ=255) aaGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCgg < 1:754558/151‑1 (MQ=255) gagagTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTa < 2:967009/151‑1 (MQ=255) agTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAAtg < 1:967389/151‑1 (MQ=255) agTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑CGGGGTGTTTTGTGGGGGAAATCTTGTT‑TGCAG‑G‑CAA‑ACCCGGGGGGCGGTCGGTTTTTCGCCCCGCCTGGGGTGGGGGGATTTTGGGACCAACGGGaa > 2:948338/1‑149 (MQ=255) gTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGTTTGGTGCGGGATATTTTGTT‑GGCCG‑C‑AAA‑GCCTGGGGGGCGGTTGGTTTTACGCTCGGCCTGGGCTGGGGGGATTTGGGCACCAGCGGGaa > 1:604031/1‑148 (MQ=255) cTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGCTGGTTTATGCGGGATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGGCGGTCGATTTTTAGCTCGGCCTGGGCTGGGGGGATTTTGGCACCAGCGGGAAtgtgga > 1:77549/1‑148 (MQ=255) tGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGTTTTGTGGGGGAAATCTTGTT‑GCCAG‑C‑AAA‑ACCTGGGGGGCGTTCGGTTTTTTGCTCGGCCTGGGGGGGGGGGATTTGGGCACCAGCGGGAATGTGgaa > 2:649703/1‑150 (MQ=255) ggCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGaaaa < 1:62898/150‑1 (MQ=255) gCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAAt < 1:697895/151‑1 (MQ=255) gCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAAt < 1:12969/151‑1 (MQ=255) tGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑GGGGGTGTTTTGTGGGGGAAATCTTGTT‑GGCAG‑C‑CAA‑ACCTGGGGGGCGTTCGATTTTTCGCTCGGGCCGGGGTGGGGGGGTTTTGGCCCCCGCGGGAAAGGGAAAAATcc > 1:579178/1‑151 (MQ=255) cGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGct < 1:200041/151‑1 (MQ=255) aGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGt < 2:244018/151‑1 (MQ=255) gTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑GAC‑CGGGGGGTTTTGTGGGGGAAATTTTTTTGGCCGC‑C‑AAA‑CCCGGGGGGCGGTTGGTTTTTA‑GCCCGGCCCTGGGTGGGGGGATTTTGGGACCCGCGGGAATGTGGAAAAACCGCCCTGtt > 1:156560/1‑151 (MQ=255) ggCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTc < 1:425120/150‑1 (MQ=255) ggCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCa < 2:672179/151‑1 (MQ=255) cGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAg > 2:160789/1‑150 (MQ=255) gTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCa < 1:495092/151‑1 (MQ=255) tGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGGATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGcc > 2:435014/1‑148 (MQ=255) gcgcGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGAt < 1:689483/150‑1 (MQ=255) gcgcGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATa < 2:420359/151‑1 (MQ=255) cgcgGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATaa < 1:160801/151‑1 (MQ=255) gggATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAata < 1:953392/151‑1 (MQ=255) gATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATAtt < 1:776857/151‑1 (MQ=255) gATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATAtt < 1:775800/151‑1 (MQ=255) atatCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAat < 2:91449/147‑1 (MQ=255) tatCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGGATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATAtt > 1:812912/1‑149 (MQ=255) ggc‑gg‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATc < 1:147736/151‑1 (MQ=255) g‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGa < 2:400255/151‑1 (MQ=255) aC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGAt < 1:453912/150‑1 (MQ=255) gggCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACa < 1:538377/151‑1 (MQ=255) cTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGCt > 1:762239/1‑151 (MQ=255) gTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGCTa > 1:810093/1‑150 (MQ=255) ttGCTGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGCTACa > 1:555303/1‑150 (MQ=255) ttGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGCTACa < 1:524478/150‑1 (MQ=255) tGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGGTACaa < 2:310399/150‑1 (MQ=255) tGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGCTACaa < 2:719714/150‑1 (MQ=255) tGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGCTACaa < 1:835051/150‑1 (MQ=255) aTGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGCTACAAAc > 1:68200/1‑150 (MQ=255) ggAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGCTACAAACAGGCg < 1:560501/151‑1 (MQ=255) aaTATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGCTACAAACAGGCggg > 1:259124/1‑151 (MQ=255) | GTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGC‑GG‑TAC‑GGGGCTGTTTGATGCGGAATATCTTGTT‑GCCAG‑C‑AAA‑GCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGCTACAAACAGGCGGG > NC_000913/4237900‑4238199 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |