Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,536,1970AT46.8% 57.4 / 54.1 62intergenic (+166/+417)yjhR/nanSpseudogene, helicase family; putative frameshift suppressor/9‑O‑acetyl N‑acetylneuraminic acid esterase
Reads supporting (aligned to +/- strand):  ref base A (3/30);  new base T (29/0);  total (32/30)
Fisher's exact test for biased strand distribution p-value = 1.22e-14
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCC  >  NC_000913/4536048‑4536346
                                                                                                                                                      |                                                                                                                                                     
aTGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAg                                                                                                                                                      <  1:876190/151‑1 (MQ=255)
aTGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTATAg                                                                                                                                                      <  1:876165/151‑1 (MQ=255)
  gATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGa                                                                                                                                                    <  1:192925/151‑1 (MQ=255)
  gATACAGGAGTAGTAAAGGGAATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTTCCTAATCATTTTCCGTTGCATAATGTGCCTGGGATTAATGGCGGGTGCTTTTAgg                                                                                                                                                     <  1:254765/150‑1 (MQ=255)
          agtagtAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATgaaaga                                                                                                                                            <  1:214451/151‑1 (MQ=255)
           gtagtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGGTTTTTGGAATgaaaaa                                                                                                                                            >  2:949875/1‑148 (MQ=255)
           gtagtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGGGGTTTTTTGAATtaaaaa                                                                                                                                            >  2:610448/1‑148 (MQ=255)
            tagtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATgaaagaa                                                                                                                                           <  2:793179/150‑1 (MQ=255)
              gtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAAt                                                                                                                                        <  2:248550/151‑1 (MQ=255)
                aaaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGGTTTTTGGAATGAAAGaaaa                                                                                                                                         >  1:738739/1‑148 (MQ=255)
                 aaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGGGGTTTTTTGGATGGAaaaaaaaac                                                                                                                                      >  2:776433/1‑147 (MQ=255)
                 aaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGGGCTTTTTTGAAAGaaaaaaaaa                                                                                                                                        >  1:505215/1‑147 (MQ=255)
                           tttACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCaataat                                                                                                                            <  1:850276/150‑1 (MQ=255)
                            ttACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAataata                                                                                                                           <  1:746465/150‑1 (MQ=255)
                               ccAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGGGCTTTTTTGAATGAAAAAAAAAGCAAGCAaaaatataa                                                                                                                        >  2:651885/1‑150 (MQ=255)
                                   tGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGGGCTTTTTGGGATGAAAAAAAAAGCAAGCAATAATAtaataa                                                                                                                     >  1:293891/1‑149 (MQ=255)
                                       aaGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCt                                                                                                               <  1:541422/151‑1 (MQ=255)
                                        aGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTa                                                                                                              <  2:167682/151‑1 (MQ=255)
                                           cGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGGTTTTTTGGATGTAAGAAAAAACAAACAAAAAAATAATAATAGCCTAAtt                                                                                                           >  2:785108/1‑151 (MQ=255)
                                               tttCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGAGATTAATGGCGGGGGTGTTTTAGCAAGAAAAAAAAATCCAAGAAAAATATAAAAAAGGCCCAAtttttt                                                                                                       >  1:129305/1‑151 (MQ=255)
                                                 tCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGGTTTTTGGAATGAAAGAAAAAGCAAGAAAAAAAATAATAAAAGGCTAATttttttt                                                                                                     >  1:695728/1‑150 (MQ=255)
                                                  ccGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTg                                                                                                     <  2:289447/150‑1 (MQ=255)
                                                  ccGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCCTTTTTGAATGAAAAAAAAATCAAGCAAAAAAATAATAATGGCCTCATtttttttt                                                                                                    >  2:381584/1‑149 (MQ=255)
                                                    gTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTTTGACTTAAAGAAAAAGCGAGCGATAAAATAATAAAAGGCTGTTTTCttt                                                                                                      >  2:581970/1‑147 (MQ=255)
                                                    gTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAAc                                                                                                  <  1:783403/151‑1 (MQ=255)
                                                      tttATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTTTGGATGAAAAAAAAAGCAAGCAATAATATAATAATTGCCTTATtttttt                                                                                                      >  1:50522/1‑145 (MQ=255)
                                                       ttATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAAcat                                                                                                <  2:283483/150‑1 (MQ=255)
                                                             cGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTTTGGATGAAAAAAAAAGAAAGCAATAATATAATAATGGGCTAATTTTTTTTTACATCAtt                                                                                            >  1:896441/1‑148 (MQ=255)
                                                             cGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGGGGTTTTTTGTATGAAAGAAAAAGCAAGAAAAAATATAATAAATGGCTAATTTTTTTTaa                                                                                                   >  2:406760/1‑141 (MQ=255)
                                                               aGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCa                                                                                       <  1:343739/151‑1 (MQ=255)
                                                                   gCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGGGGTTTTTGGAATGGAAAAAAAAGCAAACAAAAAAATAATAATGGCCTCATTTTTTTTAAAATCATTaaaaaaa                                                                                     >  1:809628/1‑144 (MQ=255)
                                                                     cTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGGGCTTTTTGGGATGAAAAAAAAAGCAAACAATAATATAAAAAAAGACTAATTTTTTTTAAAATCATTaa                                                                                          >  1:308302/1‑142 (MQ=255)
                                                                       ttCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGGGGTTTTTGGAATGAAAAAAAAAGCAAACAAAAAAATAATAAATGGCTAATTTTTTTTAACAACAtttaacaaat                                                                                    >  1:910146/1‑138 (MQ=255)
                                                                        tCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATatcatca                                                                               <  1:776508/150‑1 (MQ=255)
                                                                            gATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGGGGTTTTTGGAATGAAAAAAAAAGCAAACAATAATATAATAATAGCCTAATTTTTTTTAACATCATTAAACATatcaacatcct                                                                           >  1:383181/1‑148 (MQ=255)
                                                                                 taAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTTTTTATGAAAAAAAAATCAAGCAAAAATATAAAAATTGGCTAATTTTTTTGAAAATAATTAAACATATTATAAATCTCTAttt                                                                     >  2:641906/1‑151 (MQ=255)
                                                                                  aaaTCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTg                                                                    <  1:940308/151‑1 (MQ=255)
                                                                                     tCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTTTGAATGAAAAAAAAAGCAAGCAATAATATAAAAAATGCCTTATTTTTTTTTACATAATTAAGCAAATCATCATCTTCTtttttt                                                                   >  2:704453/1‑147 (MQ=255)
                                                                                     tCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTTGGAATAAAAAAAAAAACAAACAATAATTTAAAAAATGCCTAATTTTTTTTAAAAACATTAAACATATCATCATCGTCTAtttt                                                                    >  1:706757/1‑147 (MQ=255)
                                                                                     tCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGGGCTTTTTTGGAAGAAAAAAAAAGCAAGCAATAAAATAATAAAGGGCTAATTTTTTTTAAAAAAATTAAGCATATCATTATTGTCTAttt                                                                     >  1:687695/1‑147 (MQ=255)
                                                                                        tATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTTTGAATGAAAGAAAAAGCAAACAATAAAATAAAAAAAGCCTAATTTTTTTTAACATCATTAAGCATATTATCATCGTCTttttttccga                                                               >  1:626524/1‑144 (MQ=255)
                                                                                        tATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGa                                                               <  1:203514/150‑1 (MQ=255)
                                                                                             tttACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTTTGTATGAAAAAAAAAGCAAGCAAAAAAATAATAAAAGGCTAATTTTTTTTTACATCATTTAGAATATCATCATCATCTATTTTTCAGAATCCg                                                          >  2:522817/1‑150 (MQ=255)
                                                                                               tACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTTGGAATGAAAAAAAAAACAAACAAAAATATAATAATAGGCTAATTTTTTTTAACATCATTAAACATATCATCATCGTCTATTTTCCAGAAACCGTc                                                        >  1:828470/1‑150 (MQ=255)
                                                                                               tACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTc                                                        <  2:10788/150‑1 (MQ=255)
                                                                                                     aTCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTtat                                                 <  1:24950/151‑1 (MQ=255)
                                                                                                       cATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTTGGAATGAAAGAAAAAGCAAGCAATAATATAATAAATGCCTAATTTCTTTGAAAATCATTAAAAATATCATCATCGTCTTTTTTCCAGAATCCGTCGACTtat                                                 >  1:708297/1‑149 (MQ=255)
                                                                                                       cATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATaa                                               <  1:644968/151‑1 (MQ=255)
                                                                                                          tttCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATc                                             <  2:738668/150‑1 (MQ=255)
                                                                                                            tCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTTGGGATGAAAAAAAAAGCAAGCAATAATATAAAAAATGCCTTATTTTTTTTTAAATCATTAAACATATAATCATCGTCTATTTTCCACAATACGTCGACCTATAATctc                                           >  2:352567/1‑148 (MQ=255)
                                                                                                             ccTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCa                                         <  2:729205/151‑1 (MQ=255)
                                                                                                                 tGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGaa                                      <  2:681415/150‑1 (MQ=255)
                                                                                                                   cATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACgg                                   <  1:384853/151‑1 (MQ=255)
                                                                                                                    aTAATGCGCCTGGGATTAATGGCGGGGGGTTTTTGGAATGAAAAAAAAAGGAAGCAATAATATAATAATGGGCTAATTTTTTTTAAAATCATTAAACATATTATCATCGTCTATTTTCCAGAATCCGTCGACTTTTAATAGCCAGAAAgg                                   >  1:456251/1‑150 (MQ=255)
                                                                                                                     tAATGCGCCTGGGATTAATGGCGGGGGCTTTTTTGGATGAAAAAAAAAGCAAAGAAAAAAATAAAAATAGCCTAATTTCTTTTTAAATCATTAAACATATTAATATCGTCTATTTTCCAGAAACCGTCGGCTTTTAAtttccacaa                                      >  1:280606/1‑138 (MQ=255)
                                                                                                                         gcgcCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATc                             <  1:561186/151‑1 (MQ=255)
                                                                                                                               gggATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACg                       <  2:562439/151‑1 (MQ=255)
                                                                                                                                          cGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAAc            >  2:656207/1‑151 (MQ=255)
                                                                                                                                            ggTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGc          <  1:664325/151‑1 (MQ=255)
                                                                                                                                             gTGCTTTTAGGAATGAAAGGAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCt         <  1:248899/151‑1 (MQ=255)
                                                                                                                                                   tttAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCtgtg      <  2:153051/149‑1 (MQ=255)
                                                                                                                                                    ttAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGcc   >  1:67531/1‑151 (MQ=255)
                                                                                                                                                      aGGAAAGAAAGAAAATGCAAGCAGTAATATAATAATGGCATAATTTCTTTGAACACCAGAAAGCATATCATCATCGTCTATTTGCCGGAATCCGTCGACTTATAATCGCCAGAACGGCATATCATGTGGGTGGTGCGAACGCTGTGGtcc  <  2:811529/150‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
ATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCC  >  NC_000913/4536048‑4536346

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: