Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,618,666 IS2 (+) +5 bp coding (239‑243/666 nt) marC ← UPF0056 family inner membrane protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1469240NA (NA)66 (1.000) 58/298 0.2 100% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 = 1618670 0 (0.000)coding (239/666 nt) marC UPF0056 family inner membrane protein
* ? NC_000913 1618666 =0 (0.000)60 (0.920) 52/296 0.4 100% coding (243/666 nt) marC UPF0056 family inner membrane protein
?NC_000913 = 1651548 NA (NA)noncoding (706/706 nt) IS2 repeat region

Only 100 of 123 total aligned reads displayed.

ACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCC  >  NC_000913/1618516‑1618812
                                                                                                                                                      |                                                                                                                                                  
agcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag                                                                                                                                                    >  2:372443‑M1/151‑151 (MQ=255)
agcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag                                                                                                                                                    >  1:317897‑M1/151‑151 (MQ=255)
 gcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagc                                                                                                                                                   <  1:572767‑M1/2‑1 (MQ=255)
 ccGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAgc                                                                                                                                                   <  1:765748/151‑1 (MQ=255)
   aaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagccg                                                                                                                                                 <  1:262842‑M1/4‑1 (MQ=255)
      gaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgctctgggttatcgctcgccacgggaatatctgcggccgcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCt                                                                                                                                              >  1:660206‑M1/145‑151 (MQ=255)
       gTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCt                                                                                                                                               <  1:884307‑M2/149‑2 (MQ=255)
       aaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTg                                                                                                                                             <  1:240152‑M1/8‑1 (MQ=255)
            tgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAAtt                                                                                                                                        <  2:840914‑M1/13‑1 (MQ=255)
              gCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggcc                                                                                                                                      >  1:127132‑M2/1‑141 (MQ=255)
              cagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCg                                                                                                                                      <  1:762079‑M1/15‑1 (MQ=255)
                gaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCa                                                                                                                                    >  2:618893‑M1/135‑151 (MQ=255)
                   gCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccct                                                                                                                                  >  2:373151‑M2/1‑136 (MQ=255)
                   gCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccct                                                                                                                                  >  2:14514‑M2/1‑136 (MQ=255)
                         gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGa                                                                                                                            <  2:385067‑M1/25‑1 (MQ=255)
                           cacaAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctcca                                                                                                                         >  1:774814‑M2/1‑128 (MQ=255)
                              aaaGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagac                                                                                                                      >  2:1018384‑M2/1‑125 (MQ=255)
                                  gCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaacc                                                                                                                  <  2:678924‑M2/151‑31 (MQ=255)
                                    cgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCa                                                                                                                >  2:955968‑M1/115‑151 (MQ=255)
                                    aaTATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaacca                                                                                                                 <  2:1001673‑M2/150‑32 (MQ=255)
                                     gaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCa                                                                                                                <  1:136741‑M1/37‑1 (MQ=255)
                                      aatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCaaa                                                                                                              >  2:288204‑M1/113‑151 (MQ=255)
                                       atTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatat                                                                                                             >  1:652959‑M2/1‑116 (MQ=255)
                                       atTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaata                                                                                                              >  1:838181‑M2/1‑116 (MQ=255)
                                          ggCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcac                                                                                                          <  1:634502‑M2/151‑39 (MQ=255)
                                             aCTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcactt                                                                                                        <  2:493226‑M2/150‑41 (MQ=255)
                                                gcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATc                                                                                                    <  1:886857‑M1/49‑1 (MQ=255)
                                                 ggTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaata                                                                                                   >  2:947948‑M2/1‑106 (MQ=255)
                                                 ggTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaata                                                                                                   >  1:723012‑M2/1‑106 (MQ=255)
                                                  gTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataa                                                                                                  >  1:835116‑M2/1‑105 (MQ=255)
                                                  gTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataa                                                                                                  >  2:744394‑M2/1‑105 (MQ=255)
                                                  gTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaata                                                                                                   <  2:303710‑M2/150‑46 (MQ=255)
                                                  atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCAc                                                                                                  <  1:244454‑M1/51‑1 (MQ=255)
                                                   ttCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaata                                                                                                   <  1:685805‑M2/149‑46 (MQ=255)
                                                    agtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCa                                                                                                >  1:373546‑M1/99‑151 (MQ=255)
                                                      aTCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtg                                                                                               <  1:1003720‑M2/150‑50 (MQ=255)
                                                          tCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgat                                                                                             >  2:676820‑M2/1‑97 (MQ=255)
                                                           ccAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtc                                                                                         >  2:114890‑M2/1‑96 (MQ=255)
                                                              gCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta                                                                                      >  2:749243‑M2/1‑93 (MQ=255)
                                                               ctctTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta                                                                                      <  1:626935‑M2/150‑59 (MQ=255)
                                                                tatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGt                                                                                    <  1:912578‑M1/65‑1 (MQ=255)
                                                                 ctTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaa                                                                                     >  2:514213‑M2/1‑90 (MQ=255)
                                                                   cgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAAt                                                                                 >  2:886913‑M1/84‑151 (MQ=255)
                                                                    gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAAt                                                                                 <  2:997151‑M1/68‑1 (MQ=255)
                                                                       cgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATAc                                                                               >  2:388395‑M1/80‑149 (MQ=255)
                                                                       cgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGc                                                                             <  1:178398‑M1/72‑1 (MQ=255)
                                                                          cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGccac                                                                          <  2:607207‑M1/75‑1 (MQ=255)
                                                                           gCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt                                                                          <  2:1001014‑M2/150‑71 (MQ=255)
                                                                            cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGccacc                                                                         <  2:210438‑M1/76‑1 (MQ=255)
                                                                             ttttCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggcccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga                                                                        <  1:194073‑M2/150‑73 (MQ=255)
                                                                             gggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACcat                                                                       <  2:569064‑M1/78‑1 (MQ=255)
                                                                               ttCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac                                                                      >  1:104821‑M2/1‑76 (MQ=255)
                                                                               ttCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac                                                                      >  1:820974‑M2/1‑76 (MQ=255)
                                                                                aatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACcatcat                                                                    >  2:494669‑M1/71‑151 (MQ=255)
                                                                                      ccGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcat                                                               >  2:418658‑M2/1‑69 (MQ=255)
                                                                                         gTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga                                                           >  2:986474‑M2/1‑66 (MQ=255)
                                                                                          gcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAAt                                                          <  1:321942‑M1/91‑1 (MQ=255)
                                                                                            agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATAc                                                        >  1:90215‑M1/59‑151 (MQ=255)
                                                                                              cgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGt                                                      >  2:857376‑M1/57‑151 (MQ=255)
                                                                                               gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGt                                                      <  2:155968‑M1/95‑1 (MQ=255)
                                                                                               gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGt                                                      <  1:903372‑M1/95‑1 (MQ=255)
                                                                                                 gcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTaca                                                   >  1:215533‑M1/54‑151 (MQ=255)
                                                                                                 gcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTac                                                    <  2:833023‑M1/97‑1 (MQ=255)
                                                                                                  tcGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatg                                                  <  1:299980‑M2/151‑95 (MQ=255)
                                                                                                   cGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatg                                                  <  1:702623‑M2/150‑95 (MQ=255)
                                                                                                    tgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCg                                                <  2:166694‑M1/101‑1 (MQ=255)
                                                                                                    tgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCg                                                <  1:374458‑M1/101‑1 (MQ=255)
                                                                                                     gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGa                                               >  2:572820‑M1/50‑151 (MQ=255)
                                                                                                      taatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCg                                                <  1:135985‑M1/101‑1 (MQ=255)
                                                                                                       ttCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattg                                              <  1:590606‑M2/150‑99 (MQ=255)
                                                                                                        tCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat                                            <  2:922654‑M2/151‑101 (MQ=255)
                                                                                                           gTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat                                            >  1:439237‑M2/1‑48 (MQ=255)
                                                                                                            gttaagtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATc                                        >  1:861811‑M1/43‑151 (MQ=255)
                                                                                                             tGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctt                                       <  1:785165‑M2/151‑106 (MQ=255)
                                                                                                              gCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctt                                       >  2:2481‑M2/1‑45 (MQ=255)
                                                                                                               cGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctt                                       <  2:47741‑M2/149‑106 (MQ=255)
                                                                                                                ggAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagg                                    <  2:817235‑M2/151‑109 (MQ=255)
                                                                                                                 gtgataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGa                                   >  1:95809‑M1/38‑151 (MQ=255)
                                                                                                                 gAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttaggg                                   >  2:500632‑M2/1‑42 (MQ=255)
                                                                                                                  aaaGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggc                                  <  2:462718‑M2/151‑111 (MQ=255)
                                                                                                                   gataacagatgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACt                                 <  1:849440‑M1/116‑1 (MQ=255)
                                                                                                                      agCATCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccgga                              >  2:519572‑M2/1‑37 (MQ=255)
                                                                                                                         aTCCGAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggaga                            <  2:454293‑M2/150‑117 (MQ=255)
                                                                                                                           atgtctggaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTa                         >  2:100328‑M1/28‑151 (MQ=255)
                                                                                                                             gAAAACCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgc                       <  2:921528‑M2/151‑122 (MQ=255)
                                                                                                                                 aCCGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagac                   >  2:185997‑M2/1‑26 (MQ=255)
                                                                                                                                  gaaatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCgg                  <  1:961212‑M1/131‑1 (MQ=255)
                                                                                                                                  ccGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacg                  <  1:915724‑M2/151‑127 (MQ=255)
                                                                                                                                   cGATAAACGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacgg                 <  2:201794‑M2/151‑128 (MQ=255)
                                                                                                                                    aatataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGc                 <  1:717769‑M1/132‑1 (MQ=255)
                                                                                                                                       ataggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTg             <  2:171474‑M1/136‑1 (MQ=255)
                                                                                                                                       aaaCGCGACGATTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgta             >  2:245344‑M2/1‑20 (MQ=255)
                                                                                                                                        taggggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGt            <  1:177422‑M1/137‑1 (MQ=255)
                                                                                                                                            ggcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCAt        >  1:171464‑M1/11‑151 (MQ=255)
                                                                                                                                             gcaaatccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATg       >  2:812999‑M1/10‑151 (MQ=255)
                                                                                                                                               cgaTTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacag     >  2:206600‑M2/1‑12 (MQ=255)
                                                                                                                                                gaTTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacagg    <  2:258538‑M2/151‑141 (MQ=255)
                                                                                                                                                gaTTAAGCCGCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacagg    >  1:74202‑M2/1‑11 (MQ=255)
                                                                                                                                                 atccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTtgc   <  1:481265‑M1/146‑1 (MQ=255)
                                                                                                                                                  tccaGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTtgcc  <  2:790947‑M1/147‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                  
ACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGCGACGATTAAGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCC  >  NC_000913/1618516‑1618812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.