| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,119,238 | Δ18 bp | coding (76‑93/486 nt) | rraA ← | ribonuclease E (RNase E) inhibitor protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4119238 | 4119255 | 18 | 64 [0] | [0] 65 | rraA | ribonuclease E (RNase E) inhibitor protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4119237 | 0 (0.000) | 60 (1.160) | 54/278 | 0.1 | 100% | coding (94/486 nt) | rraA | ribonuclease E (RNase E) inhibitor protein |
| ? | NC_000913 | 4119256 = | 0 (0.000) | coding (75/486 nt) | rraA | ribonuclease E (RNase E) inhibitor protein | |||||
GACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTGGGCTGTT > NC_000913/4119090‑4119387 | gACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTTCGCCAAAgtt < 2:198276‑M1/151‑4 (MQ=255) cgcCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggag < 1:259929‑M1/151‑8 (MQ=255) ccAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaa < 1:217932‑M1/151‑10 (MQ=255) ttCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagc > 1:59831‑M1/1‑138 (MQ=255) tCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagc < 2:654985‑M1/150‑14 (MQ=255) cAGCATCGACCAGTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcgg < 1:663216‑M1/151‑16 (MQ=255) cAGCATCGACCAGTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcg < 1:76127‑M1/150‑15 (MQ=255) gCATCGACCAGTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggtt > 2:73726‑M1/1‑134 (MQ=255) aTCGACCAGTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttcc < 2:545319‑M1/151‑20 (MQ=255) tCGACCAGTGCGCGACGAACAGAACCCCCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggt < 2:807000‑M1/147‑17 (MQ=255) gACCAGTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacg < 1:595816‑M1/151‑23 (MQ=255) ccAGTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacggc < 1:656728‑M1/151‑25 (MQ=255) gTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgtt < 2:372807‑M1/151‑28 (MQ=255) gTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgtt < 2:858364‑M1/151‑28 (MQ=255) cgcgACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaac > 1:598631‑M1/1‑121 (MQ=255) gacgaACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatc > 1:295795‑M1/1‑118 (MQ=255) gaACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgtcaacatcttc > 2:127243‑M1/1‑115 (MQ=255) aCAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttctt < 2:47148‑M1/151‑39 (MQ=255) cAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttg < 1:499017‑M1/151‑40 (MQ=255) accGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatg < 1:307327‑M1/151‑47 (MQ=255) accGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatg > 1:355807‑M1/1‑105 (MQ=255) gCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgcc > 1:13137‑M1/1‑102 (MQ=255) cATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcac > 1:24190‑M1/1‑100 (MQ=255) acgacAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagct < 2:848619‑M1/151‑57 (MQ=255) acAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcgg < 1:40402‑M1/151‑60 (MQ=255) cAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcgga < 1:841193‑M1/151‑61 (MQ=255) gAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagttcggaagt < 2:287073‑M1/151‑64 (MQ=255) acacGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtat < 1:591078‑M1/151‑66 (MQ=255) gACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgt > 2:183386‑M1/1‑82 (MQ=255) cACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtattt < 2:290600‑M1/151‑73 (MQ=255) cACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtattt < 2:600969‑M1/151‑73 (MQ=255) gTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaac > 1:152757‑M1/1‑67 (MQ=255) gTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaa < 1:402333‑M1/150‑84 (MQ=255) cGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacatt < 2:676912‑M1/151‑88 (MQ=255) aGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagtt > 2:470226‑M1/1‑59 (MQ=255) aGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagtt < 2:348262‑M1/151‑93 (MQ=255) tCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgct > 2:685883‑M1/1‑56 (MQ=255) cGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgct < 1:132877‑M1/150‑96 (MQ=255) aaCCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaatt < 2:320755‑M1/151‑105 (MQ=255) aCCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattt > 1:257322‑M1/1‑46 (MQ=255) cGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttca < 2:457715‑M1/151‑109 (MQ=255) gTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttc > 1:282377‑M1/1‑42 (MQ=255) ttGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcag > 2:499825‑M1/1‑41 (MQ=255) ccTCGAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatat > 1:21340‑M1/1‑37 (MQ=255) gAAACATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcg < 2:364869‑M1/151‑119 (MQ=255) aCATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgtttacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgct > 1:605526‑M1/1‑30 (MQ=255) aCATTTTACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaatttcagtatatcgcgctat < 1:685080‑M1/151‑122 (MQ=255) tttACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgctatgtg > 1:402121‑M1/1‑26 (MQ=255) tttACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgctatgtg > 2:165160‑M1/1‑26 (MQ=255) ttACCGTGGTTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaaaattttcttgaaagatgtcacaaagctcggaagtatcgtatttcataggcttaaaattcagttgctgggagaattttcagtatatcgcagtatgtgg > 2:618648‑M1/1‑25 (MQ=255) ttACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgctatgtgg > 1:361383‑M1/1‑25 (MQ=255) ttACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgctatgtg < 2:194647‑M1/150‑126 (MQ=255) tACCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgctatgtggg > 1:791347‑M1/1‑24 (MQ=255) aCCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgctatgtggg < 1:477935‑M1/150‑128 (MQ=255) aCCGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgctatgtggg < 1:158102‑M1/150‑128 (MQ=255) ccGTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgctatgtgggct > 2:859107‑M1/1‑22 (MQ=255) gTGATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgctatgtgggctgt > 1:725267‑M1/1‑20 (MQ=255) gATTATTTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgctatgtgggctgttg < 1:746755‑M1/151‑134 (MQ=255) attTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgctatgtgggctgttggcaa < 2:498479‑M1/151‑138 (MQ=255) attTGTCCGCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgctatgtgggctgttggca > 1:303471‑M1/1‑14 (MQ=255) gCCAAAgttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgctatgtgggctgttggcaaaatcatca < 2:101942‑M1/151‑146 (MQ=255) aagttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgctatgtgggctgttggcaaaatcatcaattg < 2:677193‑M1/151‑150 (MQ=255) aagttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgctatgtgggctgttggcaaaatcatcaattg > 2:769997‑M1/1‑2 (MQ=255) agttggagaacagcggttccacgacgttaacatcttcttgatagatgtcacaaagctcggaagtatcgtatttcataggcttaacattcagttgctgcgagaattttcagtatatcgcgctatgtgggctgttggcaaaatcatcaattgt < 1:262016‑M1/151‑151 (MQ=255) | GACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTGGGCTGTT > NC_000913/4119090‑4119387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |