| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,804,648 | Δ38 bp | intergenic (+187/‑130) | nrdF → / → proV | ribonucleoside‑diphosphate reductase 2, beta subunit, ferritin‑like protein/glycine betaine/proline ABC transporter periplasmic binding protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2804648 | 2804685 | 38 | 58 [0] | [0] 58 | nrdF/proV | ribonucleoside‑diphosphate reductase 2, beta subunit, ferritin‑like protein/glycine betaine/proline ABC transporter periplasmic binding protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2804647 | 0 (0.000) | 54 (0.910) | 48/278 | 0.4 | 100% | intergenic (+186/‑168) | nrdF/proV | ribonucleoside‑diphosphate reductase 2, beta subunit, ferritin‑like protein/glycine betaine/proline ABC transporter periplasmic binding protein |
| ? | NC_000913 | 2804686 = | 0 (0.000) | intergenic (+225/‑129) | nrdF/proV | ribonucleoside‑diphosphate reductase 2, beta subunit, ferritin‑like protein/glycine betaine/proline ABC transporter periplasmic binding protein | |||||
TAATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTTATATCACGGGAAATTCCGGCGATTTGCTCGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAAT > NC_000913/2804536‑2804834 | ggaaataattcccgccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcg > 1:332628‑M2/151‑151 (MQ=255) aaataattcccgccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCa < 2:912545‑M2/3‑1 (MQ=255) aataattcccgccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCAt > 1:639880‑M2/148‑151 (MQ=255) taattcccgccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATc > 2:481991‑M2/146‑150 (MQ=255) ttcccgccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAat > 1:894524‑M2/143‑150 (MQ=255) gccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCAt > 1:446545‑M2/138‑151 (MQ=255) ccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATg > 1:823054‑M2/137‑151 (MQ=255) aaatagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGcc > 1:188325‑M2/135‑151 (MQ=255) agctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCcaca < 1:779423‑M2/20‑1 (MQ=255) agctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACAt > 2:481080‑M2/131‑151 (MQ=255) ctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCcaca < 1:951167‑M2/20‑1 (MQ=255) tttttatcacgcaaataatttgtggtgatctacactgattctctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACAttt < 1:520863‑M2/23‑1 (MQ=255) tttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTg > 1:26086‑M2/128‑151 (MQ=255) ttttatcacgcacataatttgccgtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACAtt < 1:430302‑M2/22‑1 (MQ=255) atttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTc < 1:775688‑M2/41‑1 (MQ=255) ttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCa < 1:26766‑M2/42‑1 (MQ=255) tgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTc > 2:259040‑M2/108‑148 (MQ=255) ggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGAtt < 2:977411‑M2/46‑1 (MQ=255) gagatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGAtt < 1:908049‑M2/46‑1 (MQ=255) gatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATtctc > 2:549210‑M2/102‑150 (MQ=255) acactgattctctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttcgcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTAt < 1:1171‑M2/54‑1 (MQ=255) ctgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGtt < 2:474769‑M2/57‑1 (MQ=255) ctgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGtt > 1:244950‑M2/94‑150 (MQ=255) tgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGtt > 2:269591‑M2/93‑149 (MQ=255) atactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAggg < 1:605847‑M2/61‑1 (MQ=255) atactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAggg < 1:458569‑M2/61‑1 (MQ=255) tctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGt > 2:387500‑M2/87‑148 (MQ=255) gttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGaaa < 1:456292‑M2/67‑1 (MQ=255) gttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGa < 1:539579‑M2/65‑1 (MQ=255) cattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGt > 2:83959‑M2/80‑151 (MQ=255) ttattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTg > 2:116782‑M2/78‑150 (MQ=255) ttcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACt > 1:689420‑M2/75‑150 (MQ=255) cctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTc < 2:370651‑M2/81‑1 (MQ=255) tgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTcc > 2:690998‑M2/69‑150 (MQ=255) gaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCAt > 1:624374‑M2/68‑151 (MQ=255) ttcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAatatat > 2:931157‑M2/56‑151 (MQ=255) tcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAatatat < 1:804997‑M2/96‑1 (MQ=255) tcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAatatat < 2:364867‑M2/96‑1 (MQ=255) caggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATc < 1:690835‑M2/97‑1 (MQ=255) caggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCg < 1:158321‑M2/98‑1 (MQ=255) gttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACAt > 2:175438‑M2/49‑150 (MQ=255) gttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACAt > 2:287912‑M2/49‑150 (MQ=255) ttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGAc > 2:807162‑M2/46‑151 (MQ=255) ctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATa > 2:343985‑M2/40‑150 (MQ=255) tttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGa > 2:223706‑M2/35‑150 (MQ=255) ttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGaa < 1:902667‑M2/117‑1 (MQ=255) gacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCt > 2:234272‑M2/32‑151 (MQ=255) acaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCtt > 2:45339‑M2/31‑151 (MQ=255) acaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCtt > 1:980708‑M2/31‑151 (MQ=255) acaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCtt < 1:31351‑M2/121‑1 (MQ=255) aaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTc > 1:582599‑M2/29‑151 (MQ=255) ttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCaa < 2:796886‑M2/136‑1 (MQ=255) ctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCaat < 1:637047‑M2/137‑1 (MQ=255) tcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCaatta > 2:99148‑M2/12‑150 (MQ=255) tgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAg < 1:506562‑M2/145‑1 (MQ=255) ctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGaa > 1:22833‑M2/4‑150 (MQ=255) ctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGaa > 1:170998‑M2/4‑150 (MQ=255) tcGCATCAATATTCATGCCACATTTGCCATCAGGGGCTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAAt > 1:706707‑M2/3‑151 (MQ=255) | TAATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTTATATCACGGGAAATTCCGGCGATTTGCTCGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAAT > NC_000913/2804536‑2804834 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |