| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,538,109 | 0 | A | C | 42.6% | 104.8 / 28.5 | 69 | G219G (GGT→GGG) | nanM | N‑acetylneuraminic acid mutarotase |
| Reads supporting (aligned to +/- strand): ref base A (29/10); new base C (0/29); total (29/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.87e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATCCCCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTT > NC_000913/4537960‑4538258 | aTCCCCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CAc < 2:75452/151‑1 (MQ=255) ccccGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCt < 2:559484/151‑1 (MQ=255) ccGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCttt < 1:852557/151‑1 (MQ=255) cGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCttt > 1:901854/1‑150 (MQ=255) cGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCttt > 2:104925/1‑150 (MQ=255) cGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTa < 2:365504/151‑1 (MQ=255) cGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTa < 2:639560/151‑1 (MQ=255) aaaCCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTca < 1:1574/151‑1 (MQ=255) ccGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACaa < 2:870082/151‑1 (MQ=255) gCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAAcc < 1:743425/151‑1 (MQ=255) cAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAAccgc < 1:410121/151‑1 (MQ=255) cGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCAcc > 2:600979/1‑151 (MQ=255) gCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGCTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGGTTTAT‑CACCTTTATTCACAACCGCCGCAc > 2:192764/1‑149 (MQ=255) gatgaGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGt > 2:731685/1‑151 (MQ=255) tgaGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTa > 2:655418/1‑150 (MQ=255) agaCGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTAcc > 2:200019/1‑150 (MQ=255) gggAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGc > 2:261582/1‑151 (MQ=255) gggAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGc > 2:857281/1‑151 (MQ=255) ggAGCAAGTTTTTTCCATTTAAATTTTTTCCCGGGAAAATAAAGTTAAAAACCGCCACCCTTCCGC‑ACCCCGGTTTGGCC‑TCCGCCTTA‑AAAAACCC‑GGTTTTTCC‑CCCCTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCg < 2:395856/151‑1 (MQ=255) aGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGAt > 1:24734/1‑151 (MQ=255) gCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGAtt > 1:894608/1‑151 (MQ=255) cAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTc > 1:10422/1‑151 (MQ=255) aaGTTTATTCCATTTTAAATTATTACCGGTGAAATAAATTTAAAATCCGGCATCCGTTCGCAACCCTGGTTGGG‑C‑TTCGCCATA‑AATAAGCA‑AGGTTTTAT‑CCCCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCg < 1:478547/151‑1 (MQ=255) tttttCCTTTTTAAATTTTGCCGGGTGAAACAATGTCAAAATCCGCCCTCCTTCCGCACCCCTGTTTTGG‑C‑‑TCCCCAAT‑AAAAAGCCAAGGTTTTAC‑CCCCTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTc < 2:149664/143‑1 (MQ=255) tttttCCATTTAAAATTATTCCGGGTAAAATAATTTTAAAATCCGCCTCCCTTCCACAATCCTGGTTTGG‑T‑TTCCCCATA‑AAAACGCC‑GGTTTTTAT‑CCCCTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGcc < 2:197969/146‑1 (MQ=255) aTTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTCGG‑C‑TTCGCCATT‑AATAAGCC‑AGGCTTTAT‑CACCTTTATTCACAAACGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAg > 1:810948/1‑149 (MQ=255) tCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGt > 1:710644/1‑150 (MQ=255) aaTTATTCCGGGTGAAATCAAGTACAAATCCGGCACCGTTTCCCACTCCT‑GTTTGG‑G‑TTCCCCCTTAAATAACCC‑AGGTTTTAT‑CCCTTTTATCCACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTg < 2:885327/151‑1 (MQ=255) tattaCCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCtg > 1:947531/1‑151 (MQ=255) ggTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTg > 1:91353/1‑149 (MQ=255) gaaaaacaaatttCAATTCCGGCCTCCTTTCCCAACCCTGGTTGGG‑T‑TCCCCCTTT‑AAAAAGCA‑TGTTTTTAC‑CCCTTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAgg < 2:371234/140‑1 (MQ=255) cAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaa > 1:551258/1‑150 (MQ=255) aaGTTAAAATACGGCATCCGTTCGCAATCCTGTTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAC‑CCCCTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaa < 1:77184/149‑1 (MQ=255) aGTTAAAATACGGCATCCGTCCGCAATCCTGGTTTGG‑C‑TCCGCCATT‑AATAAGCC‑AGGTTTTAT‑CCCCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAg < 1:716994/151‑1 (MQ=255) aaaaTGCGGCACCCTTTCCCACCCCTGTTTGGC‑C‑TTCCCAATA‑AATACGCC‑GGGTTTTAT‑CCCCTTTTTCCACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGaca < 2:642220/149‑1 (MQ=255) aaaTAGGGAGTCCGTTCAAAATCCAGTTTTGC‑C‑TACGCAAGT‑AAGAAGCC‑TGTTTTTAT‑CCCTTTTTTACAAAGCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGacaac < 1:358709/151‑1 (MQ=255) aaTACGGCACCGGTTCGCATCTCTGTTTTGG‑C‑TCCGCATTT‑AAAACGCC‑A‑GTTTTATCCCCCTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGacaaca < 2:923251/151‑1 (MQ=255) atccGGCATCCGTTCGCATTCCTGTTTTGG‑C‑TCCGCAATT‑AAAAAGCC‑GGTTTTTAC‑CCCCTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAg < 2:490258/148‑1 (MQ=255) aTACGGCATCCGTTCGCAATCCTGTTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGTTTTTAC‑CCCCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAg < 1:828728/151‑1 (MQ=255) gccacccGTTCCAATTCCTGTTTGGG‑C‑TTCGCCTTA‑AATAAGCC‑AGTTTTTAT‑CCCCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAg < 2:323562/142‑1 (MQ=255) aTCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACtt > 1:327161/1‑150 (MQ=255) ccGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTAtt > 1:694230/1‑151 (MQ=255) ccGTCCGCAATCCTGGTTTGG‑C‑TCCGCCATT‑AATAAGCC‑AGGTTTTAT‑CCCCTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTAt < 1:649247/150‑1 (MQ=255) ccGTCCGAAACCCTGTTTTGG‑C‑TCCGCCATA‑AATAACCC‑AGTTTTTAC‑CCCTTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTa < 2:171972/149‑1 (MQ=255) cGTTCGCAATCCGGGTTGGG‑C‑TTCGCCATT‑AATAAGCC‑AGTTTTTAT‑CCCTTTTATCCACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTg < 1:931723/151‑1 (MQ=255) gCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTgaaga > 1:745688/1‑150 (MQ=255) ccTGTTTGGG‑T‑TCCGCCATT‑AAAAACCA‑AGTTTTTAT‑CCCCTTTATTCACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGaaa < 2:686501/147‑1 (MQ=255) ggTTTGG‑C‑TCCGCCATT‑AATAAGCC‑AGTTTTTAT‑CCCCTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAaata < 1:960824/146‑1 (MQ=255) ttGG‑CTTTCGCCATA‑AATAGGCC‑AGTTTTTAT‑CCCTTTTTTTCACAGCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAAtc < 1:397041/147‑1 (MQ=255) ttGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTg > 2:23909/1‑151 (MQ=255) g‑C‑TCCGCTATT‑AAAAAGCA‑AGGTTTTAT‑CTCTTTTCTTCACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGc < 1:828214/149‑1 (MQ=255) ttCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCtttt > 1:505325/1‑151 (MQ=255) cATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTc > 1:741202/1‑151 (MQ=255) tt‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCa > 1:878806/1‑150 (MQ=255) tt‑AATAACCC‑AGTTTTTCC‑CCCCTTTATACACACCCGCCGCCCCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTc < 1:561352/149‑1 (MQ=255) ttaaaagccc‑AGTTTTTAT‑CCCTTTTATTCCAAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTc < 1:857294/141‑1 (MQ=255) aataaGCC‑AGTTTTTAT‑CCCCTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCaaa < 1:446236/150‑1 (MQ=255) aataaCCC‑AGTTTTTAT‑CCCCTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCaaa < 1:201567/150‑1 (MQ=255) aaaatcc‑AGTTTATCT‑CCCCTTTATACCAACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAAt < 2:871655/146‑1 (MQ=255) aaaaggcgatttttaAT‑CACTTTTATTCAAAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCaaa < 2:227812/139‑1 (MQ=255) aaaaggccggtttttAT‑CCCTTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCaaaa < 1:602751/140‑1 (MQ=255) cc‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTg > 2:226043/1‑150 (MQ=255) ccgggTTTTAC‑CCCTTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTg < 2:396265/147‑1 (MQ=255) c‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTg > 1:228154/1‑149 (MQ=255) gggTTTTAT‑CACCCTTATTCACAACCGCCGCCCCAGCCGTTCTGCACGAGGGCGATTCTCCAGCGTAACTCCATTGCTGTGCTGAGGGAACAAAAGACATCCGAGACTTATTGAAGACTTATTCTTCAGCTTTTTTGACTAACTAGTGAGc > 2:122060/2‑151 (MQ=255) tttttAC‑CCCTTTTATCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGt < 1:2873/144‑1 (MQ=255) ttttAT‑CCCCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCAt < 1:893109/150‑1 (MQ=255) ttAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTg > 1:501665/1‑150 (MQ=255) ttAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTg > 1:923817/1‑150 (MQ=255) aCCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGAtttt > 1:438775/1‑150 (MQ=255) | ATCCCCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGG‑C‑TTCGCCATT‑AATAAGCC‑AGGTTTTAT‑CACCTTTATTCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTT > NC_000913/4537960‑4538258 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |