| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 599,576 | 0 | T | G | 51.3% | 99.1 / 132.8 | 76 | V288G (GTG→GGG) | cusA | copper/silver efflux system, membrane component |
| Reads supporting (aligned to +/- strand): ref base T (6/31); new base G (39/0); total (45/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.21e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.22e-12 | |||||||||||
ACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAA > NC_000913/599428‑599723 | aCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑Ggggggg > 2:577012/1‑151 (MQ=255)aCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑Ggggggg > 2:813210/1‑151 (MQ=255) cTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGggg‑ggggggggg > 1:1095159/1‑148 (MQ=255) acTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGGTCCTGc > 1:724583/1‑150 (MQ=255) caTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGG‑GGGGGGGCGATACTGCGGTCC‑GGCaa > 2:1091401/1‑150 (MQ=255) cGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAAc < 1:1164169/151‑1 (MQ=255) cGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGGTTCTGCGGTCC‑GGCcaaaa > 2:645359/1‑150 (MQ=255) gTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGG‑GGGGGGGGGGTCCTGCGATCC‑CGCaaaaa > 2:819523/1‑149 (MQ=255) ttttAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGATCCTGCGGTCC‑GGCAAAAAAGc > 2:235487/1‑151 (MQ=255) aaaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCga < 1:240903/151‑1 (MQ=255) aaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGG‑GGGGGGGGGGTCCTGCGGTCC‑GGCCAAAAAGccc > 1:827195/1‑148 (MQ=255) aaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGG‑GGGGGGGGGAGCCTGCGATCC‑GGCAAAAAAGccc > 2:967020/1‑148 (MQ=255) aaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGATCCTGCGATCC‑GGCAAAAACGCCCgcg > 2:19854/1‑148 (MQ=255) ccAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGGTCCTGCGATCC‑GGCAAAAAAGCCCgag > 1:341335/1‑147 (MQ=255) aGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGTGGTCCTGGGAACC‑GGCCAAAACGcccccgaa > 1:1041632/1‑142 (MQ=255) gTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGAt < 2:695455/151‑1 (MQ=255) tGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGTGAGTCTGCGATCC‑GGGAAAAAAGCCCggggaggg > 2:160598/1‑141 (MQ=255) gAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGTGTTCGT‑CGCACC‑CGCAAAAACGCCCCCGAAggg > 2:1107113/1‑145 (MQ=255) aaaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATcgc < 2:407041/151‑1 (MQ=255) aaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGATCCTGCGATCC‑CGCAAAAACGCCCGCGAAgaga > 2:412040/1‑146 (MQ=255) ggCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGG‑GGGGGGGGGGTCCTGCGATCC‑GGCCAAAACGCCCGGGAAGGGATcgcc > 1:742842/1‑147 (MQ=255) ggCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCgccgcc < 2:532631/150‑1 (MQ=255) ggCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCgccgcc < 2:354657/150‑1 (MQ=255) gCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGt < 2:33976/151‑1 (MQ=255) gTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGTGGTCCCGCGGGCC‑GGCAAAAACGCCCGAGAAGGGATCGCCGCCGTg > 1:532498/1‑150 (MQ=255) gTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGATCCTGCGATCC‑GGCAAAAACGCCCGGGAAGGGATCgccgcc > 2:730391/1‑147 (MQ=255) tGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGGAGCCGCGATCT‑GGCAAAAACCACCGAGGAGTGGGcgccggccgcg > 1:350668/1‑144 (MQ=255) ccGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGTGGTCCTTCGATCC‑GGCAAAAACGCCCGAGAAGTgcacggccccgcgaa > 2:767357/1‑134 (MQ=255) gTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGGGATCCTCCGGTCC‑GGCTCAAAAGCCCGAGAAGTGATAgccgcc > 1:645043/1‑141 (MQ=255) ttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGG‑GGGGGGGTGATCCTGGGACCC‑GGCAAAAACGCCCGGGAAGTGATCGCCGCCGTGaa > 2:939747/1‑144 (MQ=255) tATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACaaa < 2:999851/150‑1 (MQ=255) aTCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAAc < 1:164534/150‑1 (MQ=255) aTCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGGGATTGCCGCCGCGAAGGACaaa > 2:345166/1‑149 (MQ=255) tCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGATCCTGCGATCCGGGCAAAAAACCCCG‑GAAGGGGGCGCCGCCGGGGAGGACAAAATg > 1:532183/1‑151 (MQ=255) tGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGATCCTGCGGTCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGCGAAGGGCAAACTgg > 2:511920/1‑150 (MQ=255) gcgcGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACt < 2:402101/147‑1 (MQ=255) gcgcGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGATACTGGGGTCC‑GGCCAAAACGCCCGAGGAGTGATCGCCGGCGGGAAGGAGAAAATgg > 2:424879/1‑149 (MQ=255) cgcgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGaaa < 1:864255/151‑1 (MQ=255) gcgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGATCCTGCGATCC‑CGCAAAAAAGCCCGAGAAGGGATCGCCGCCGTGAAGGACAAACTGGaaa > 2:1172624/1‑150 (MQ=255) cgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAAc < 1:377894/150‑1 (MQ=255) aTGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCt < 2:1166670/151‑1 (MQ=255) aTGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCt < 2:419715/151‑1 (MQ=255) aTGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCt < 1:302139/151‑1 (MQ=255) aTGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGGTCCTGCGATCC‑GGCAAAAAAGCCCGGGAAGGGATCGCCGCCGTGAAGGACAAAATGGaaa > 1:776730/1‑147 (MQ=255) tGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGGTCCCGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACCAACTGGAAAAGCTg > 2:994860/1‑151 (MQ=255) tGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGGGCCCGCGCTCC‑GGCAAAAACACCCGGGAAGCGGTTCCCCCCGCGCAGGGCAAACTGGgaa > 1:114992/1‑146 (MQ=255) tGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGTGATCCTGCGATCC‑GGCCAAAAAGCCCGGGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGaa > 2:19497/1‑150 (MQ=255) cGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAag < 2:1142216/151‑1 (MQ=255) cGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGGTCCTGCGATCC‑GGGAAAAAAGCCCGAGAAATGATCGCCGCCGGGGAGGACAAACTTGAAAAGCTGaaaa > 2:681670/1‑150 (MQ=255) ccAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCt < 1:979571/150‑1 (MQ=255) ccAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCt < 1:399393/150‑1 (MQ=255) gATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGATCCTGCGATCC‑GGCAAAAACGCCCGGGAAGTGGTCGCCCCCCTGGAGGACAAACTGGAAAAGCTGGAAAGGAGTCTGcc > 1:442413/1‑150 (MQ=255) aTTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCgg < 2:1112471/151‑1 (MQ=255) gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAgg > 2:400621/1‑151 (MQ=255) gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGATCCTGCGATCC‑GGGAAAAACGGCCGGGAAGGGATCGCCGCCGGGAAGGGCAAAATGGAAACGCTGAAAAGGAGTCTGCCGGAAgg > 2:424728/1‑151 (MQ=255) cccGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGGGATCGCCGCCGTGAAGGACAAAATGGAAACGCTGAAAAGTAGTCTGCCGGAAgg > 2:1004037/1‑150 (MQ=255) agaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGATCCCGCGGTCC‑GGCAAAAAAGCCCGAGAAGGGGTCGCCGCCGTGGAGGACAAAATGGGAACGCCGGAAAGGAGGCTGCCGGGAGGGGTgg > 1:231179/1‑150 (MQ=255) gaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGga < 2:998385/150‑1 (MQ=255) cgcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGTGGGCCTGCGCTCC‑CGCGAAAACGCCCGAGAAGGGATCCCCGCCGCGGAGTACAAACATGAAACGCGGAAAAACAGTCTGCCGGGAAGCgggggg > 1:1093152/1‑145 (MQ=255) gcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAg < 2:1158970/150‑1 (MQ=255) cATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGGGATCGCCGCCGGGAAGGACAAACTGGAAAAGCTGAAAAGGAGTCTGCCGGAAGGCGTGGAGATAGTTacaa > 2:340004/1‑149 (MQ=255) aTTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGGGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTacaaca > 2:1020837/1‑150 (MQ=255) gCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGGTCCTGTGATCC‑GGGAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAAAGCTGAAAAGGAGGATGCCGGGAGGGGGGgagggaggttaaaaatac > 1:666766/1‑135 (MQ=255) gCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACg < 1:142059/151‑1 (MQ=255) gCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGGGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATa > 2:887245/1‑149 (MQ=255) cGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGGGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGGTCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGGAGTCTGCCGGAAGGCGGGGGGATAGTTACAACATACg > 2:733055/1‑149 (MQ=255) gAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATc < 2:341339/151‑1 (MQ=255) aCGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGcagcca < 1:813194/151‑1 (MQ=255) gcgaaggcgaagTGGCGGGC‑GGGGGGGGGATCCCGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGcagcca > 2:910951/1‑148 (MQ=255) cgaaggcgaagTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTc < 1:223013/151‑1 (MQ=255) gcgaagTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGa < 1:900584/151‑1 (MQ=255) gaagTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGAcc < 2:249521/151‑1 (MQ=255) ggcgggc‑gGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCgcgc < 1:290018/150‑1 (MQ=255) cgggc‑gggGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCAt > 1:213631/1‑151 (MQ=255) gggc‑gggGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATc < 1:970070/151‑1 (MQ=255) gggc‑gggGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATc < 1:852092/151‑1 (MQ=255) gggc‑gggGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATc > 1:425736/1‑151 (MQ=255) gggTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACaa < 2:12515/151‑1 (MQ=255) gggTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACa > 2:79556/1‑150 (MQ=255) | ACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGC‑GGGGTGGTGATCCTGCGATCC‑GGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAA > NC_000913/599428‑599723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |