Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,576,069 | 0 | T | C | 41.5% | 88.9 / 32.1 | 65 | G517G (GGA→GGG) | yddB | putative TonB‑dependent outer membrane receptor |
Reads supporting (aligned to +/- strand): ref base T (29/9); new base C (0/27); total (29/36) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.54e-11 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ACGCGCAATAACGTTCTTACCGATTTTCTGCTGCAATCCCATTGCCAGTTCATCGTTATAAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGG > NC_000913/1575928‑1576218 | aCGCGCAATAACGTTCTTACCGATTTTCTGCTGCAATCCCATTGCCAGTTCATCGTTATAAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCa < 2:211464/151‑1 (MQ=255) aCGCGCAATAACGTTCTTACCGATTTTCTGCTGCAATCCCATTGCCAGTTCATCGTTATAAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCa < 1:420780/151‑1 (MQ=255) cAATAACGTTCTTACCGATTTTCTGCTGCAATCCCATTGCCAGTTCATCGTTATAAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAat > 1:121247/1‑151 (MQ=255) cAATAACGTTCTTACCGATTTTCTGCTGCAATCCCATTGCCAGTTCATCGTTATAAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAat < 1:77655/151‑1 (MQ=255) tCTTACCGATTTTCTGCTGCAATCCCATTGCCAGTTCATCGTTATAAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGc < 2:670291/150‑1 (MQ=255) tACCGATTTTCTGCTGCAATCCCATTGCCAGTTCATCGTTATAAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCAt > 1:971241/1‑150 (MQ=255) cttttttCTGCTGCAATCCCATTGCCAGTTCATCGTTATAAGGCTTTTTAAAATCCTGATAACGCGTCAGAGTTTTATTCCCTGATACCGATTCCGTCCAGCTATGGCGGATATCACGTAACCCCATATAAAAAATATTCCCGCCAt < 2:967575/144‑1 (MQ=255) cGATTTTCTGCTGCAATCCCATTGCCAGTTCATCGTTATAAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGt > 2:820263/1‑150 (MQ=255) ttttCTGCTGCAATCCCATTGCCAGTTCATCGTTATAAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACg > 1:797787/1‑151 (MQ=255) tCTGCTGCAATCCCATTGCCAGTTCATCGTTATAAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGtt > 2:939916/1‑151 (MQ=255) ctgcAATCCCATTGCCAGTTCATCGTTATAAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTtata > 1:583754/1‑150 (MQ=255) tgcAATCCCATTGCCAGTTCATCGTTATAAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAAc > 1:836673/1‑151 (MQ=255) aaccccATTGCGAGTTCATCGTTATAAGGCTTTTTAAAACCTTAATACCGTGTCAGTTTTTTATTCCCTAACCCCAATCCCGCCCACCTATTCCGGATATCATTTAACCCCAAATCAAAAATTTCCCCGCCATAGTAACGGTTATaa < 2:422405/144‑1 (MQ=255) cccattcccattTCATCTTAATAAGTCTTTTTAAAATCCTAATACCGCGTCAGATTTTTATTCCCTGATCCCTTTTCCGTCCAGCTATTGCGGATACCCCGTAACCCAATATCAAAAATATTCCCGCCATAGTAACGGTTATAACct < 1:431245/147‑1 (MQ=255) cccATTGCCAGTTCTTCTTTATAAGGCGTTTTCAATTCCTGATAACGCGTCAGATTTTTATTCCCTGATCCCGATTCCGCCCAGCTATTGCGGATATCACGAAACCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACctgc < 1:434079/149‑1 (MQ=255) cATTGCCAGTTCATCGTTATAAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGt > 1:633729/1‑150 (MQ=255) cctgTTCATCTTTATAAGGCTTTTTAAAATCCTGATAACGCGTCAGATTTTTTTTCCCTGATACCGTTCCCGCCCAGTTTTTGCGAATATCACGTAACCCCATATAAAAAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCa < 1:806287/147‑1 (MQ=255) tttcttcTTTAAAGGGCTTTTTAAAATCTTAAAAACGCTTAAGATTTTTTTTCCCTAATCCCATTTCCTCCCACCTTTTGGGGATATCATAAAACCCCAAATAAAAAATATCCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTg < 2:669105/149‑1 (MQ=255) ttctttgtaataCGGTGTTTTCAACTCCTAATAAGGCTTCAGATTTTTATTACCTGATCCCGATCCCTCCCACCTATTGCGGATATCACGTACTCCCATATAAAAAATATCCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTg < 2:721332/140‑1 (MQ=255) tttttaaagggCTTTTTAAAACCCTAAAAACGCGTAAGATTTTTTTTCCCTGATACCGATTCCGTCCAGTTTTTGCGGATATCACTTAACCCCATAAAAAGAATTTTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGtt < 1:922808/141‑1 (MQ=255) tttttATAGGGTTTTTTAAACTCTTAATACCGCGTAAGTTTTTTATTCCCTGATCCCGATCCCCCCCACTTTTTGGGAATATCTCTTAACCCAATATAAAAATTATCCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAgg < 2:132111/145‑1 (MQ=255) ttATAGGGCTTTTAAAATTCTTAATAACGCGTCAGTTTTTTATTCCCTGATACCGATCCCGCCCATCTTTGGGGGATATCACATAACCCAATATAAAAAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTg < 2:655433/149‑1 (MQ=255) tataAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGAtt > 2:248833/1‑151 (MQ=255) ataGGGCTTTTTAAAATCGTGAAACCGCGTAAGAGTTTTATTCCCGAATCCCGATTCCGCCCAGCTATGGCGGATACCACTAAATCCCATATAAAAAATTTTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGa < 1:242099/148‑1 (MQ=255) ataAGGCTTTTTAAAATCCTGATACCGCGTCAGATTTTTATTCCCTGATCCCGATTCCGCCCAGTTATTGCGGATATCACGTAACCCAATATAAAAAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTa < 1:22949/151‑1 (MQ=255) taAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGAtt > 2:30912/1‑149 (MQ=255) taAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGAtt > 2:243873/1‑149 (MQ=255) aGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGc > 2:723776/1‑150 (MQ=255) gctttttAAATTCTTAATAACGCGTCATTTTTTTTTTCCCTGATCCCGTTTCCGTCCAGCTATGGCGAATCTCACGTAACCCAATATAAAAATTATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAg < 2:665068/144‑1 (MQ=255) cGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCaaa > 2:600758/1‑150 (MQ=255) cGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCaaa > 2:600882/1‑150 (MQ=255) tttttAAATTCCTAATACCGCGTAAGTTTTTTATTCCCTAATCCCGTTCCCCCCCAGTTTTTGGGAATATCATTTAACCCAATATAAAAATTATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCaaaa < 2:470998/149‑1 (MQ=255) gTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCaaaa > 1:620220/1‑150 (MQ=255) ttttCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAat > 2:650614/1‑151 (MQ=255) ttCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAatat > 1:828292/1‑151 (MQ=255) gATACCGCGTCAGATTTTTATTCCCTGATCCACTCCCCGCCCAGCTATTGCGAATATCACGTAATCCCAAATAAAAAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCg < 1:290725/150‑1 (MQ=255) aaagcgctTCAGTTTTTTTTTCCCTAATCCCGATTCCGCCCAGTTTTTGCGAATATCACGTAACCCCATATAAAAAATATCCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGt < 1:49515/146‑1 (MQ=255) aaaccgctTCAGATTTTTTTTCCCTGATACCGATCCCGCCCAGCTTTGGCGAATATCACATAACCCAATAAAAAAAATTTTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCAtt < 2:722905/142‑1 (MQ=255) aTACCGCGTCATATTTTTTTTCCCTGATCCCGATCCCGTCCAGCTATTGCGGATATCACTTACCCCCATATAAAAAATTTTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGt < 2:598749/150‑1 (MQ=255) aTAACGCGTCAGATTTTTTTTACCTGATCCCGATCCCGCCCAGCTTTGGCGGATACCACGTAACCCAAAAAAAAAAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCg < 1:908674/149‑1 (MQ=255) aTAACGCGTCAGATTTTTATTCCCTGATCCCGTTCCCGCCCACTTTTGGCGGATATCACGTAACCCCATATAAAAAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTcc < 1:305033/148‑1 (MQ=255) ttttttTCCCTAATACCGTTCCCGTCCAGCTATTGGGGATATCACTTAATCCCATATAAAAAATTTTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCggg < 1:262876/149‑1 (MQ=255) ttttATTCCCTGATCCCGTTCCCGTCCAGCTATTGCGGATATCACTTAACCCCATATAAAAAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCgg < 1:799975/148‑1 (MQ=255) ttattaCCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCgggg > 1:210451/1‑148 (MQ=255) tattcCCTAATCCCAATCCCGCCCAGTTATTGCGATTATAACGAAACCCAATATAAAAAATTTTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGgaga < 2:357294/150‑1 (MQ=255) tattaCCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAACCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGgaga < 2:973239/150‑1 (MQ=255) ccTGATCCCTATCCCGTCCAGCTATTGCGAATATCCCGTAATCCAATATAAAGAATTTTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATAtt < 1:786012/149‑1 (MQ=255) ccTGATCCCGATCCCGCCCAGCTATTGCGAATATCAATTAACCCAATAAAAAAAATATCCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGatat < 2:1023003/148‑1 (MQ=255) aTACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGtt > 2:1013968/1‑151 (MQ=255) tACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGttt > 1:738116/1‑151 (MQ=255) ccgttcccGTCCAGCTTTTGCGGATACCCCTTAACCCAATATAAAAAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTg < 1:1001063/144‑1 (MQ=255) cGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGa > 2:511714/1‑150 (MQ=255) gATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGAc > 1:206169/1‑150 (MQ=255) ccGTCCAGCTATTGGGGATACCACTTAACCCCATATAAAAAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATa < 2:443749/151‑1 (MQ=255) cGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGAt > 2:316189/1‑149 (MQ=255) tCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGtt > 1:310048/1‑151 (MQ=255) tCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGtt > 2:739998/1‑151 (MQ=255) gttATTGCGGATATCACGTAACCCAATATAAAAAATTTTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGTTgt < 1:293199/147‑1 (MQ=255) tggggaatatCACATAACCCAAAAAAAAAAATTTTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGTTgtcatag < 2:298256/144‑1 (MQ=255) tggCGAATCTCACTAAACCCAATATAAAAAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGTTgtcata < 1:37378/147‑1 (MQ=255) ggATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGTTgtcatagtcat > 2:64043/1‑150 (MQ=255) cagttAACCCCATAAAAAAATTATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCAc < 1:939940/147‑1 (MQ=255) gTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGcc > 1:172525/1‑151 (MQ=255) aaTCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCgg > 1:250206/1‑151 (MQ=255) aTCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCggg > 1:294655/1‑151 (MQ=255) | ACGCGCAATAACGTTCTTACCGATTTTCTGCTGCAATCCCATTGCCAGTTCATCGTTATAAGGCGTTTTCAAATCCTGATAACGCGTCAGAGTTTTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGG > NC_000913/1575928‑1576218 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |