| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,825,061 | 0 | G | A | 46.2% | 87.0 / 52.2 | 80 | intergenic (‑124/+79) | ves/spy | cold‑ and stress‑inducible protein/periplasmic ATP‑independent protein refolding chaperone, stress‑induced |
| Reads supporting (aligned to +/- strand): ref base G (34/9); new base A (0/37); total (34/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.18e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGC > NC_000913/1824917‑1825208 | aCGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑cc < 1:941989/151‑1 (MQ=255)aCGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑cc < 2:1168519/151‑1 (MQ=255) gCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑ccgc < 1:47502/151‑1 (MQ=255) atCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAAAAAA‑CCGCCGa < 2:768136/150‑1 (MQ=255) aaGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTg > 2:738891/1‑151 (MQ=255) aGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGt > 1:330175/1‑151 (MQ=255) caatccTCGCTCCCGGCCGGTTTTTTTCTTTTTTATCTTTCAGGTACCCGTGTTTGTTTTCCGCCACCTGGTTTTTTTTACTTTAGTGGTGATCGTTTTTTTTTTCCACCTTTTTG‑AAAAAAAAAAAAAAAA‑CCGCCGATCCTGTCCAcc < 2:917884/145‑1 (MQ=255) cATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGc > 2:371499/1‑151 (MQ=255) cATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGc > 1:991269/1‑151 (MQ=255) aCTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCAtt > 1:1001272/1‑151 (MQ=255) cTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGGGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCAtt > 1:361383/1‑150 (MQ=255) cccccGGCCCTTTTTTTTCATTTTTATCGTTAAGGTAACCGGGGATGGTTATCGGCAACTGGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTTACAACTGTTTG‑AAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTg < 1:473727/148‑1 (MQ=255) tCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGc > 2:317763/1‑150 (MQ=255) cccGGCCCTTTTTTTTCATTTTTATCGTTCAGGTACCCGTGGATGTTTATCGGCAACTCGGGTAATTTACTTTAGTGGTGATCAGGTTTTTTTTACAACTTTTTG‑AGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTa < 2:471042/145‑1 (MQ=255) ccGGCCCGTTCTTTTCATTTTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTGGGGTGATTTACGTTAGGGGTGATCAGGTTTTTTTTACACCTGTTGG‑AAAAGAGAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAg < 1:881010/151‑1 (MQ=255) cccGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAgg > 2:306406/1‑148 (MQ=255) ccGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAg > 2:1094703/1‑150 (MQ=255) gTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTgg > 1:31664/1‑151 (MQ=255) ttttCTTTTTTATCTTTCAGGAACCCGTGGTGGTTTATCGGCACCTCGGTTATTTTCCGTTAGTGGTGATC‑GGGTTTTTTTTCAACTTTTTGAAAAAGAGAAAAAAAAC‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACa < 2:956800/150‑1 (MQ=255) ttttCATTTTTATCTTTCAGGTACCCGTGGATGGTTATCGGCACCTGGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTTACAACTTTTTG‑AGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACa < 1:1042405/150‑1 (MQ=255) ttttCATTTTTATCTTTCAGGTACCCGTGGATGGTTATCGGCAACTCGGGTGTTTTACGTTAGTGGTGATCGGGTTTTTTTAACAACTGTTTG‑AGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGAc < 1:190141/149‑1 (MQ=255) ttttCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACa > 2:1177439/1‑150 (MQ=255) ttGTTTTCTTTCAGGTAACGGGGGATGGTTATCGGCAACTGGGGTGATTTACGTTGGTGGTGATCAGGCTTTTTTTAAATTTGTTTG‑AGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGAcc < 1:1159610/149‑1 (MQ=255) ttttATCTTTCAGGTACCGGGGGTTGTTTATCGCCACCTGGGGTGTTTTAGGTTATTGGTATTCGGTTTTTTTTAACAATTTTTTG‑AAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcgg < 1:474452/148‑1 (MQ=255) gTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcggcg > 1:1090595/1‑151 (MQ=255) ttatttttCAGGTAACGGTGTTTGTTTATGGGCAACGGGGGTATTTTACGTTAGGGGTGATCAGTTTTTTTTTACACCTGTTGG‑AAAAGAAAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcggcg < 2:106634/144‑1 (MQ=255) ttATCTTTCGGTTACCGGGGGATGTTTATCGAAAACTGGGGTGTTTTACTTTAGTGGTGATCGGGTTTTTTTTACAACTGTTTG‑AAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcggc < 1:1092259/149‑1 (MQ=255) ttATCGTTCAGGTAACGGGGGTTGTTTATCGGCAACGGGGGTGTTTTATTTTAGTGGGTATCAGTTTTTTTTAACACTTGTTGG‑AAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcggcg < 2:905324/150‑1 (MQ=255) tatgtttCAGGTACCGGGGGATGTTTATCGGCAACTGGGGTGTTTTACGTTAGGGGTGATCGGTTTTTTTTTACACTTGTTGG‑AGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcggcgg < 1:799067/145‑1 (MQ=255) tATTGTTCGGGTAACGGTGGTGGGTTAGCGGAAACTGGGGTGATTTACGTTAGTGGTGATCAGCTTTTTTTTACAACTGTTAG‑AAAAGAGAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcggcgg < 1:353281/150‑1 (MQ=255) cgttaggttaacgttGGATGTTTTTCGTCACCTTGGGTAATTTGCGTATGGGGTGATCAGGTTTTTTTTAAAACTTTTTG‑AAAAAAGAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCtt < 1:483925/137‑1 (MQ=255) cGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCtt > 1:249238/1‑151 (MQ=255) ttCAGGTACCCGTGGATGGTTACCGGCAACTGGGTTGATTTACGTTAGTGGTGATCAGTTTTTTTTTACACCTTTTGG‑AGAAGAAAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTa < 1:993478/150‑1 (MQ=255) caggaaccggTGGATGTTTATCGCCAACTCGGTTGATTTCGGTTAGTGGTGACCGGGTTTTTTTTCCAACTGTTTG‑AGAAGAAAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAg < 2:1094333/141‑1 (MQ=255) ggaaacgggggATGTTTAGCGGCAACGGGGGTGATTAACGTTGGTGGGGAGCAGTTTTTTTTAACAATTGTTGG‑AGAAAAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGttt < 2:915495/142‑1 (MQ=255) cGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTTAGtttttt > 1:6734/1‑148 (MQ=255) ggATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCt > 2:795477/1‑149 (MQ=255) ggATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTg > 1:284105/1‑150 (MQ=255) gATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTg > 1:187286/1‑149 (MQ=255) aTGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGGTTTTTGGCTGaa > 2:110549/1‑150 (MQ=255) tGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGaa > 1:8848/1‑149 (MQ=255) ggtttggggCAACGCGGGTGATTTACGTTAGTGGTGTTCAGTCTTTTTTTACAATTGTTTG‑AGAAAAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGa < 2:963346/144‑1 (MQ=255) ttttCGCCAACTCGGGTTATTTACGTTAGGGGGGATCAGGCTTTTTTTAAAACTTTTTG‑AGAAGAAAAAAAAAAT‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGat < 1:537406/147‑1 (MQ=255) ttACCGGCACCTCGGGTGATTTACGTTAGTGGTGATCAGTTTTTTTTTACATCTTTTTG‑AAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGat < 1:1145196/150‑1 (MQ=255) ttACCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTTACACCTGTTTG‑AGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGaa < 1:161673/146‑1 (MQ=255) ggaaaCTGGGGTGATTTACTTTAGTGGTAATCAGGTTTTTTTTACAACTGTTGG‑AGAAAAAAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTca < 1:1063422/148‑1 (MQ=255) ggCAACTGGGGTGTTTTAGGTTAGTGGTGTTCGGGTTTTTTTTACAATTGTTGG‑AGAAGAGAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTc < 2:1014339/150‑1 (MQ=255) gCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGattatt > 2:490916/1‑148 (MQ=255) cAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTcagc > 1:476589/1‑151 (MQ=255) cAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTcag > 2:353179/1‑150 (MQ=255) acctgggttaaTTTACGTTAGTGGTGATCGGGTTTTTTTTACAATTGTTTG‑AAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTcag < 2:567763/139‑1 (MQ=255) aagtCGGGTGATTTACGTTAGGGGTGATCAGGTTTTTTTAACAGCTGTTAG‑AGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTca < 1:682792/145‑1 (MQ=255) aaCTGGGGTAATTTACTTTAGTGGTGATCAGGTTTTTTTAACAACTTTTTG‑AAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTcagca < 1:31781/151‑1 (MQ=255) gggTGATTTCGGTGAGGGGGGACCGGTTTTTTTTTCCAAGTGTTGG‑AAAGAAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGt < 2:804921/148‑1 (MQ=255) ttttACGTTGGTGGTAATCAGGTTTTTTTTAAAATTTTTGG‑AAAAGAAAAAAAAAAC‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAgg < 2:121799/148‑1 (MQ=255) aTTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGc > 1:495306/1‑150 (MQ=255) tttagtttAGTGGTGATCAGTTTTTTTTTACACCTGTTTG‑AGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAg < 1:110700/141‑1 (MQ=255) tttATGTTAGTGTTGATCGGGTTTTTTTTAAAATTTTTGG‑AAAAGAGAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGt < 2:979850/142‑1 (MQ=255) ttATGTTAGTGGTGATCTGTTTTTTTTTACAACTTTTTG‑AGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCAt < 2:935136/150‑1 (MQ=255) cGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGATGAAAGATTATTCAGCAGTTGCAGGCAtttt > 2:542881/1‑150 (MQ=255) ttggtggtaATCAGTTTTTTTTTACAATTTTTTG‑AGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTa < 2:37879/146‑1 (MQ=255) ttAGTGTTGATCAGGTTTTTTTAACAACTGTTTG‑AGAAAAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTa < 1:852963/149‑1 (MQ=255) ttAGTGGTGATAAGGTTTTTTTTACAACTTTTTG‑AAAAGAGAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTa < 1:203471/149‑1 (MQ=255) ggtgATCAGGTTTTTTTTACAACTGTTTG‑AAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCtttt < 1:662990/150‑1 (MQ=255) ggtaatcggtttttttttACACCTGTTTG‑AGAAAAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCt < 2:422387/136‑1 (MQ=255) aTCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGcc > 2:256632/1‑149 (MQ=255) tttACAATTGTTTA‑AAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCt < 1:68930/150‑1 (MQ=255) ttACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGt > 2:446371/1‑151 (MQ=255) ttACAACTGTTTG‑AGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTg < 2:338200/150‑1 (MQ=255) tACAACCGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGGTCTGt > 1:969700/1‑150 (MQ=255) aCAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTg > 1:731968/1‑148 (MQ=255) cAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCCGGACGTTCTGt > 2:791296/1‑148 (MQ=255) cAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGATTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTc > 2:650464/1‑149 (MQ=255) agctttttG‑AGAAGAAAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAg < 2:31662/145‑1 (MQ=255) tttttG‑AAAAGAAAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCa < 1:258141/144‑1 (MQ=255) tGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGc > 1:579556/1‑151 (MQ=255) agaagagaaAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTtctc > 2:141838/1‑150 (MQ=255) agaagagaaAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGGTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTtc > 1:886327/1‑148 (MQ=255) aaaagaaaaAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTtctc < 2:256095/148‑1 (MQ=255) agagaaAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGGTGCAGGCATTTTACCTTTTGCCGCTGGACGTTTTGTCAGAAGCTTCTCaaa > 2:950273/1‑150 (MQ=255) aaaaaaaaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGAGTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCGCAAAAt < 2:840747/148‑1 (MQ=255) aaaagaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTTGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGAAGCTTCTCAAAAtt > 2:607140/1‑149 (MQ=255) aaaagaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTTAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAAtt > 1:646323/1‑149 (MQ=255) aaaagaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCACAAtt > 2:163919/1‑149 (MQ=255) aaaaaaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTa < 2:438492/150‑1 (MQ=255) aaagaaaacCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCAATTTACCTTTTGCCGCTGGGCGTTCTGTCAGACACTTCTCAAAATTa < 2:610805/150‑1 (MQ=255) aaagaaaa‑CCGCCGATCCTGTCCACCGCATTGCTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGc > 1:386245/1‑151 (MQ=255) | ACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTG‑AGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGC > NC_000913/1824917‑1825208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |