Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,4350CT41.2% 94.0 / 30.3 68intergenic (‑179/‑28)ttdR/ttdAtranscriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit
Reads supporting (aligned to +/- strand):  ref base C (6/34);  new base T (28/0);  total (34/34)
Fisher's exact test for biased strand distribution p-value = 2.70e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAA  >  NC_000913/3206289‑3206584
                                                                                                                                                   |                                                                                                                                                     
gtATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAg                                                                                                                                                    <  2:416541/150‑1 (MQ=255)
   tttCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCacac                                                                                                                                                  >  1:822081/1‑149 (MQ=255)
    ttCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACaa                                                                                                                                                <  1:307954/150‑1 (MQ=255)
     tCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGATGATTTTTTAAGACaaa                                                                                                                                               >  2:54893/1‑150 (MQ=255)
      cGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAAt                                                                                                                                              <  2:1023171/150‑1 (MQ=255)
       gCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATAc                                                                                                                                            <  1:207977/151‑1 (MQ=255)
              aTTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATACaaaaa                                                                                                                                       >  1:273514/1‑149 (MQ=255)
              aTTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACt                                                                                                                                     <  2:414907/151‑1 (MQ=255)
                tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAACTg                                                                                                                                    >  2:407136/1‑150 (MQ=255)
                tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATg                                                                                                                                    >  1:184560/1‑150 (MQ=255)
                    aTTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGtt                                                                                                                               <  2:606920/151‑1 (MQ=255)
                         cTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATGGAg                                                                                                                                 >  2:968751/1‑144 (MQ=255)
                           gCTCTGGCGCAGTATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCatg                                                                                                                         <  2:945313/150‑1 (MQ=255)
                           gCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCatga                                                                                                                        <  2:830359/151‑1 (MQ=255)
                            ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATGGAGTTGGCat                                                                                                                          >  1:335328/1‑148 (MQ=255)
                                ggCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCatgatg                                                                                                                      <  1:74150/148‑1 (MQ=255)
                                ggCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAg                                                                                                                    <  1:1047682/150‑1 (MQ=255)
                                ggCGCAATATACATTCTTATTTTCGCCTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACAGTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAAGACAAAAACTGGAGTTGCCAtgatga                                                                                                                     <  2:390252/149‑1 (MQ=255)
                                 gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCg                                                                                                                  <  1:382763/151‑1 (MQ=255)
                                    cAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGaaa                                                                                                               <  2:325540/151‑1 (MQ=255)
                                      atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGTCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGaaa                                                                                                               <  1:335321/149‑1 (MQ=255)
                                        attcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGtaa                                                                                                           <  1:1067823/151‑1 (MQ=255)
                                         ttcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAAAAAAAAAAAAAAAAAGGAGTTGGCAAGATGAGGGaaa                                                                                                               >  2:764082/1‑146 (MQ=255)
                                         ttcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAGACAAATACAAAAAATGGAGGTGGCATGATTAGCGAAAGtaa                                                                                                           >  2:155883/1‑150 (MQ=255)
                                          tcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGtaat                                                                                                          <  2:213971/150‑1 (MQ=255)
                                          tcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTTAGACAAAAAAAAAAAATTGAGTTGCCATGGTGAgg                                                                                                                   >  2:663612/1‑140 (MQ=255)
                                              tcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCTGACAAAAACAAAAAATAGAGTTTGCATGTTGAGCGAAAAaaataa                                                                                                        >  1:243350/1‑148 (MQ=255)
                                                 tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCa                                                                                                     <  2:997893/148‑1 (MQ=255)
                                                  aTTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACa                                                                                                  <  1:309317/150‑1 (MQ=255)
                                                   ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGAAAAATAAAAAAAATTGAGGTGGCATGGTGAGCGGAAGTAATAAACa                                                                                                     >  2:767514/1‑146 (MQ=255)
                                                   ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGGAAATTTTTCAAAACAAAAAAAAAAATTGAGTTGCCCTGATGAGGGGAAGGAATAAACaaaa                                                                                                  >  2:310941/1‑147 (MQ=255)
                                                        gcgTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATAAAAAAAATGGAGTTGCCATGATGAGGGGAAGGAAAAAGCAACAAGGAGTg                                                                                           >  2:1160631/1‑151 (MQ=255)
                                                             gATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATa                                                                                       <  2:733634/150‑1 (MQ=255)
                                                                    gAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATAAAAAAAATGGGGGTTCCATGATGAGCGAAAAGAATAAGCAACAAGCAGGGAATAAAtttgc                                                                                >  1:211837/1‑147 (MQ=255)
                                                                         gTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACagag                                                                            <  2:198337/149‑1 (MQ=255)
                                                                             aTTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTc                                                                      <  2:431665/151‑1 (MQ=255)
                                                                               tACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCg                                                                     <  1:256072/150‑1 (MQ=255)
                                                                                       cACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACttt                                                             <  1:287244/150‑1 (MQ=255)
                                                                                        aCGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTAc                                                           <  2:929/151‑1 (MQ=255)
                                                                                         cGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGAAAAAAACAAAAAATGGAGGTTTCATGATGAGCGGAAAAAATAAACAACAAGCAGTGAAAAAGTTGAAAGAGATTGTCGCTAACatt                                                             >  2:810244/1‑148 (MQ=255)
                                                                                              gCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGACAAATAAAAAAAATGGAGGTGCCATGATGAGCGGAAGGAATAAACAAAAAGCAGTGGATAAGTTGACAGAGATTGTCGCTAACTTTACCGcc                                                       >  1:699022/1‑149 (MQ=255)
                                                                                                aaaaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATAAAAAAAATGGAGGTGCCATGATGAGCGAAAGTAATAAGCAACAAGCAGGGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGccct                                                     >  1:893721/1‑147 (MQ=255)
                                                                                                 aaaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCAAACTTTACCGCCATGAt                                                  <  2:893482/151‑1 (MQ=255)
                                                                                                  aaaaTAAAAACCCCCATTTTAGTGGTAGTTTGTGGCGGTAAATTTTTCAAGAAAAATAAAAAAACTGGAGTTGCCATAATGAGAGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAATTTTACCGCCATGAttt                                                <  2:1140926/151‑1 (MQ=255)
                                                                                                       ataAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCACACAAATACAAAAAATGGAGTTGCCATGATGAGCGGAAAGAAAAAACAAAAAAGAGGGAATAAATTGAAAGAGAATTTTGCTAAATTTTCCCCCATGAatttt                                              >  2:656480/1‑147 (MQ=255)
                                                                                                        taAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGAAAAATAAAAAAAATGGGGGTGCCATGATGAGGGAAAAGAATAAACAAAAAGCAGGGAAAAAAATGACAGAGATTGTCGCTAAATTTTCCGCCATGATTTTTaac                                           >  1:564740/1‑149 (MQ=255)
                                                                                                         aaaaCCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGAAAAATACAAAAAACGGGGGTGCCCTGATGAGCGGAAGGAATAAACAACAGGCAGGGGATAAGGTGGCAGAGAATGTCGCTAACTTTTCCGCCCTGATTTTTAccc                                          >  1:991979/1‑151 (MQ=255)
                                                                                                          aacccACATTTTTAGTGGTAGTTTGTGGCGTTGAATTTTCCCAGACAAAAAAAAAAACTGGAGTTGCCATGATGAGCGAAATAAATAAGCAACAGCCAGTGAAAAATTTAACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCg                                         <  1:543421/148‑1 (MQ=255)
                                                                                                            aCCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACCAAAACAAAAAATGGAGGTGCCCTGATGAGCGGAAGTAAAAAACAACAGGCAGTGAATAAGTTGGCAGAGATTGTCGCTAACTTTACCGCCATGATTTCTAccc                                          >  1:145894/1‑148 (MQ=255)
                                                                                                            aCCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATGGAGGTGCCATGATGAGCGAAAGTAATAAACAACAAGCAGTGAATAAATTGAAAGAGATTGTCGCTAACTTTACCGCCAGGATTTTTAccc                                          >  1:211647/1‑148 (MQ=255)
                                                                                                                caTTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATACAAAAACTGGAGGTGCCATGATGAGCGAAAGGAATAAACAACAAGCAGGGAATAAGTTTACAGAGATTTTCGCTAACTTTACCGCCATGATTTTTACCCGAATGcc                                   >  1:381020/1‑151 (MQ=255)
                                                                                                                 aTTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAAACAAAAAAAAAAAATGGAGTTGGCCTTATGAGGGAAAGGAAAAAACAAAAAGGAGTGGATAAAATGGAAGAGAATGTCGGTAAATTTAACGCCCAGATTTTTACCCGaa                                       >  1:26716/1‑146 (MQ=255)
                                                                                                                      tAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGACAAAAAAAAAAAATGGAGTTGGCCTGATGGGCGAAAGTAAAAAACAAAAAGCAGAGAATAAGTTTAAAGAGGATTTCGCTAACTTTATCGCCAAGATTTTTTCCCGAAAGCCtggtg                              >  2:790121/1‑150 (MQ=255)
                                                                                                                      tAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg                              <  1:622810/150‑1 (MQ=255)
                                                                                                                       aGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATGGAGGTGGCATGATGAGCGAAAGGAAAAAACAAAAAGCAGTGAAAAAGTTTACAAAGATTGTTGCTAACTTTTACCCCCTGATTTTTACCCCAATGCCtgatg                              >  2:179000/1‑149 (MQ=255)
                                                                                                                          ggTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgt                          <  1:247227/150‑1 (MQ=255)
                                                                                                                            tAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATGGAGTTGCCATGATGAGCGGAAGTAATAAGCAAAAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAAAGCCTGATGACgtgg                        >  1:172540/1‑150 (MQ=255)
                                                                                                                             aGTTTGTGGCGGTGAATTTTTTCCGACAAATACAAAAAATGGAGTTGCCATGATGAGCGGAAATAATAAGCAACAGGGAGGGAATAAATTTACAGAGAATGTTGCTAACTTTACCGCCCTGATTTCTAACCCAATGCCTGATGAAgtggtg                      >  2:309987/1‑151 (MQ=255)
                                                                                                                               tttGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAAAAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGtggtgg                     <  1:842726/150‑1 (MQ=255)
                                                                                                                                    ggCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAc               >  2:273986/1‑151 (MQ=255)
                                                                                                                                     gCGGTGAATTTTCCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACt              <  1:120820/151‑1 (MQ=255)
                                                                                                                                            aaTTTTTCCAGACAAATACAAAAACGGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGTAGTGAATAAGTTGACAGAAATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa          <  2:571071/149‑1 (MQ=255)
                                                                                                                                              tttttCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGc      >  1:143236/1‑151 (MQ=255)
                                                                                                                                                tttCCAGAAAAATACAAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCt     <  1:61060/150‑1 (MQ=255)
                                                                                                                                                 ttCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTa    >  2:57208/1‑150 (MQ=255)
                                                                                                                                                 ttCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTa    >  2:115353/1‑150 (MQ=255)
                                                                                                                                                 ttCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTa    <  1:143053/150‑1 (MQ=255)
                                                                                                                                                  tCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTaa   >  2:214535/1‑150 (MQ=255)
                                                                                                                                                   ccAGAAAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTaaa  <  1:170666/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAA  >  NC_000913/3206289‑3206584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: