Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 577,020 A→C intergenic (‑195/‑378) nmpC ← / → essD DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage/DLP12 prophage; putative phage lysis protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913577,0200AC100.0% 232.2 / NA 63intergenic (‑195/‑378)nmpC/essDDLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage/DLP12 prophage; putative phage lysis protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (35/28);  total (35/28)

GATAAATATTCATCTAATCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATTTGTTGAGATTTGCTTATGTATTTGTAGTGGTGTTTTCAATACTCGG  >  NC_000913/576873‑577166
                                                                                                                                                   |                                                                                                                                                  
gATAAATATTCATCTAATCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGcc                                                                                                                                                 <  1:709786/151‑1 (MQ=255)
gATAAATATTCATCTAATCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGcc                                                                                                                                                 <  2:744039/151‑1 (MQ=255)
   aaaTATTCATCTAATCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCaa                                                                                                                                               <  1:337621/150‑1 (MQ=255)
       atTCATCTAATCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTtat                                                                                                                                          <  1:158471/151‑1 (MQ=255)
       atTCATCTAATCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTtat                                                                                                                                          <  2:227446/151‑1 (MQ=255)
       atTCATCTAATCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTtat                                                                                                                                          >  2:644697/1‑151 (MQ=255)
         tCATCTAATCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTatat                                                                                                                                        >  1:541757/1‑151 (MQ=255)
           aTCTAATCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATAtt                                                                                                                                       >  2:924413/1‑150 (MQ=255)
               aaTCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTa                                                                                                                                      <  1:826063/147‑1 (MQ=255)
               aaTCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACgg                                                                                                                                  >  2:393481/1‑151 (MQ=255)
                aTCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGc                                                                                                                                 >  2:518122/1‑151 (MQ=255)
                   aaTGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGt                                                                                                                              <  2:743464/151‑1 (MQ=255)
                      gtgATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGttat                                                                                                                           <  2:668820/151‑1 (MQ=255)
                        gATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGttattt                                                                                                                         >  1:532878/1‑151 (MQ=255)
                        gATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGttattt                                                                                                                         >  2:841256/1‑151 (MQ=255)
                           tattTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGttatttat                                                                                                                       >  1:320725/1‑150 (MQ=255)
                                  aGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGct                                                                                                                >  1:755641/1‑150 (MQ=255)
                                   gATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGctct                                                                                                              <  1:241422/151‑1 (MQ=255)
                                    aTGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGctct                                                                                                              >  2:320482/1‑150 (MQ=255)
                                         aGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAAtt                                                                                                        <  1:857054/151‑1 (MQ=255)
                                          gTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAACATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAAttt                                                                                                       >  1:465142/1‑151 (MQ=255)
                                          gTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAAttt                                                                                                       <  2:419848/151‑1 (MQ=255)
                                              tGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGaa                                                                                                    <  2:34075/150‑1 (MQ=255)
                                                   tctcGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTc                                                                                               >  2:90463/1‑150 (MQ=255)
                                                   tctcGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTc                                                                                               >  1:393227/1‑150 (MQ=255)
                                                        tttGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAAttt                                                                                          >  2:518882/1‑150 (MQ=255)
                                                         ttGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTCGAAGGTTCAATTTa                                                                                         >  1:549590/1‑150 (MQ=255)
                                                            aTTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAAcc                                                                                     >  2:484646/1‑151 (MQ=255)
                                                             tttGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCg                                                                                    >  2:505147/1‑151 (MQ=255)
                                                                 tgAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCt                                                                                 >  1:228635/1‑150 (MQ=255)
                                                                  gAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTaa                                                                               <  1:379670/151‑1 (MQ=255)
                                                                  gAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTa                                                                                >  2:131761/1‑150 (MQ=255)
                                                                   aaGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTaa                                                                               >  2:31214/1‑150 (MQ=255)
                                                                       aGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAAt                                                                           >  2:350844/1‑150 (MQ=255)
                                                                        gATCTCTATTTTTATCTGAACTTGTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATa                                                                          <  2:636513/150‑1 (MQ=255)
                                                                             ctATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTg                                                                    >  2:704999/1‑151 (MQ=255)
                                                                                 ttttATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGACTAAAAATAACACTGGaa                                                                 <  1:666055/150‑1 (MQ=255)
                                                                                  tttATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGaaa                                                                <  1:694692/150‑1 (MQ=255)
                                                                                   ttATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAatt                                                              >  1:30389/1‑151 (MQ=255)
                                                                                   ttATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAat                                                               <  1:295751/150‑1 (MQ=255)
                                                                                    tATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAatt                                                              >  1:675683/1‑150 (MQ=255)
                                                                                         gAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTAttttt                                                        >  2:776099/1‑151 (MQ=255)
                                                                                              tttttCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTgg                                                     <  1:919370/149‑1 (MQ=255)
                                                                                                tttCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTTGTTAt                                                 >  1:375068/1‑151 (MQ=255)
                                                                                                 ttCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTAt                                                 <  2:478787/150‑1 (MQ=255)
                                                                                                   cTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTAttt                                               >  2:63704/1‑150 (MQ=255)
                                                                                                     aTCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTAttt                                               <  2:329861/148‑1 (MQ=255)
                                                                                                     aTCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATttgt                                             <  1:842385/150‑1 (MQ=255)
                                                                                                       cGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATttgttg                                           <  2:321192/150‑1 (MQ=255)
                                                                                                       cGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAAGCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATttgttg                                           <  1:661295/150‑1 (MQ=255)
                                                                                                             cTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATTTGTTGAGATTTg                                    >  2:437638/1‑151 (MQ=255)
                                                                                                               aTTCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATTTGTTGAGATTTg                                    <  1:632456/149‑1 (MQ=255)
                                                                                                                ttCATGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATTTGTTGAGATTTGCtt                                 >  2:736278/1‑151 (MQ=255)
                                                                                                                    tGGCTCTTGGCTGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACCCTGGAAATTATTTTTTGGTTATTTGTTGAGATTTGCTTAt                               >  1:357278/1‑149 (MQ=255)
                                                                                                                               tGAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATTTGTTGAGATTTGCTTATGTATTTGTAgtgg                  >  1:609793/1‑151 (MQ=255)
                                                                                                                                gAATAAAAATAAATCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATTTGTTGAGATTTGCTTATGTATTTGTAgtg                   <  1:221409/149‑1 (MQ=255)
                                                                                                                                   taaaaataaaTCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATTTGTTGAGATTTGCTTATGTATTTGTAGTGGTGtt              >  1:654838/1‑151 (MQ=255)
                                                                                                                                    aaaaataaaTCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATTTGTTGAGATTTGCTTATGTATTTGTAGTGGTGttt             >  2:635779/1‑151 (MQ=255)
                                                                                                                                     aaaataaaTCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATTTGTTGAGATTTGCTTATGTATTTGTAGTGGTGtttt            <  1:370157/151‑1 (MQ=255)
                                                                                                                                      aaataaatCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATTTGTTGAGATTTGCTTATGTATTTGTAGTGGTGtttt            >  1:856155/1‑150 (MQ=255)
                                                                                                                                      aaataaatCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATTTGTTGAGATTTGCTTATGTATTTGTAGTGGTGtttt            >  1:179926/1‑150 (MQ=255)
                                                                                                                                          aaatCTATTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATTTGTTGAGATTTGCTTATGTATTTGTAGTGGTGTTTTCAATa       <  2:172366/151‑1 (MQ=255)
                                                                                                                                                aTTCGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATTTGTTGAGATTTGCTTATGTATTTGTAGTGGTGTTTTCAATACTCgg  <  1:227372/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GATAAATATTCATCTAATCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAATTATTTTTTGGTTATTTGTTGAGATTTGCTTATGTATTTGTAGTGGTGTTTTCAATACTCGG  >  NC_000913/576873‑577166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: