Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 891,141 A→C N77H (AAC→CAC)  ybjC → DUF1418 family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913891,1410AC100.0% 214.7 / NA 56N77H (AAC→CAC) ybjCDUF1418 family protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (30/26);  total (30/26)

GTCGGTAAGCGACTCCCTGTCGCTGCCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGAACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGCGTGAGGCGATTATTAACAGCGCCC  >  NC_000913/890993‑891286
                                                                                                                                                    |                                                                                                                                                 
gTCGGTAAGCGACTCCCTGTCGCTGCCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCAc                                                                                                                                                 <  2:680912/151‑1 (MQ=255)
  cGGTAAGCGACTCCCTGTCGCTGCCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCAcc                                                                                                                                                <  2:827749/150‑1 (MQ=255)
  cGGTAAGCGACTCCCTGTCGCTGCCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCg                                                                                                                                               <  2:365798/151‑1 (MQ=255)
   ggTAAGCGACTCCCTGTCGCTGCCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGt                                                                                                                                              >  2:232065/1‑151 (MQ=255)
        gCGACTCCCTGTCGCTGCCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCAcc                                                                                                                                         <  2:758124/151‑1 (MQ=255)
         cGACTCCCTGTCGCTGCCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCg                                                                                                                                        >  1:127182/1‑151 (MQ=255)
          gACTCCCTGTCGCTGCCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGc                                                                                                                                       >  1:209635/1‑151 (MQ=255)
              cccTGTCGCTGCCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAat                                                                                                                                    >  1:537357/1‑150 (MQ=255)
                  gTCGCTGCCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCa                                                                                                                               <  1:454621/151‑1 (MQ=255)
                   tCGCTGCCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCAc                                                                                                                              >  2:124417/1‑151 (MQ=255)
                     gCTGCCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGt                                                                                                                            <  2:679258/151‑1 (MQ=255)
                     gCTGCCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGt                                                                                                                            <  1:174771/151‑1 (MQ=255)
                        gCCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGtt                                                                                                                           <  2:89077/149‑1 (MQ=255)
                         ccTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAg                                                                                                                        <  1:248115/151‑1 (MQ=255)
                            gAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGaaa                                                                                                                     <  1:652154/151‑1 (MQ=255)
                                cATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAgaga                                                                                                                 <  2:340067/151‑1 (MQ=255)
                                  ttttCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAagag                                                                                                                  >  1:124071/1‑148 (MQ=255)
                                  ttttCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGaa                                                                                                                >  2:201700/1‑150 (MQ=255)
                                      ctcGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGaaaa                                                                                                              >  2:517686/1‑148 (MQ=255)
                                              gAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACg                                                                                                   >  1:31967/1‑151 (MQ=255)
                                                  tGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCa                                                                                                >  1:611852/1‑150 (MQ=255)
                                                     aGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCa                                                                                            <  2:378829/151‑1 (MQ=255)
                                                      gATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCAt                                                                                           >  1:647187/1‑151 (MQ=255)
                                                         tCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTg                                                                                         >  1:794567/1‑150 (MQ=255)
                                                             atgatTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAGCCATTGAACt                                                                                     <  2:122247/150‑1 (MQ=255)
                                                                atTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTAtt                                                                                 <  1:359604/151‑1 (MQ=255)
                                                                   tttCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTtgt                                                                              >  2:207656/1‑151 (MQ=255)
                                                                    ttCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTtgt                                                                              <  2:215749/150‑1 (MQ=255)
                                                                      ctcGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGc                                                                           >  2:105064/1‑151 (MQ=255)
                                                                           tgtTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCg                                                                      >  2:574070/1‑151 (MQ=255)
                                                                            gtTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCg                                                                      <  1:217099/150‑1 (MQ=255)
                                                                                tGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTcc                                                                  >  2:406220/1‑150 (MQ=255)
                                                                                    cATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCg                                                             <  1:856606/151‑1 (MQ=255)
                                                                                        cTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCAt                                                         >  2:247358/1‑151 (MQ=255)
                                                                                           cccGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTc                                                      >  2:195880/1‑151 (MQ=255)
                                                                                            ccGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTc                                                      >  2:146595/1‑150 (MQ=255)
                                                                                                 gCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACtgat                                                >  2:730040/1‑151 (MQ=255)
                                                                                                   ggtggtggtTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACtgatga                                              <  1:201703/151‑1 (MQ=255)
                                                                                                             aTTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTcc                                    >  1:343205/1‑151 (MQ=255)
                                                                                                                  tcAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGaa                                 <  1:777753/149‑1 (MQ=255)
                                                                                                                  tcAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAg                                <  2:785286/150‑1 (MQ=255)
                                                                                                                   cAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAgcg                              <  1:717044/151‑1 (MQ=255)
                                                                                                                   cAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAgc                               <  1:714024/150‑1 (MQ=255)
                                                                                                                   cAGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAAACCATTTCCGAAgcg                              <  2:864537/151‑1 (MQ=255)
                                                                                                                    aGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAgcgc                             >  2:105814/1‑151 (MQ=255)
                                                                                                                    aGGTGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAgcgc                             >  1:137957/1‑151 (MQ=255)
                                                                                                                       tGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGc                          >  2:268095/1‑151 (MQ=255)
                                                                                                                       tGGCAAAACGTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGc                          >  2:724098/1‑151 (MQ=255)
                                                                                                                                gTCTTGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGCGTGAGGCg                  >  1:686235/1‑150 (MQ=255)
                                                                                                                                   ttGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGCGTGAGGCGatt               >  1:246151/1‑150 (MQ=255)
                                                                                                                                   ttGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGCGTGAGGCGatt               >  2:164475/1‑150 (MQ=255)
                                                                                                                                    tGCCCCACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGCGTGAGGCGat                <  1:51987/148‑1 (MQ=255)
                                                                                                                                       cccACAGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGCGTGAGGCGATTATTaa          <  2:718471/151‑1 (MQ=255)
                                                                                                                                          acaGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGCGTGAGGCGATTATTAAc         >  2:71141/1‑149 (MQ=255)
                                                                                                                                           caGCTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGCGTGAGGCGATTATTAACAgc      <  1:463603/151‑1 (MQ=255)
                                                                                                                                              cTGATGCACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGCGTGAGGCGATTATTAACAGCGcc   >  2:913226/1‑151 (MQ=255)
                                                                                                                                               tgatgcACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGCGTGAGGCGATTATTAACAGCGccc  >  1:131061/1‑151 (MQ=255)
                                                                                                                                                gatgcACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGCGTGAGGCGATTATTAACAGCGccc  <  1:923382/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
GTCGGTAAGCGACTCCCTGTCGCTGCCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGAACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGCGTGAGGCGATTATTAACAGCGCCC  >  NC_000913/890993‑891286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: