| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,804,864 | Δ13 bp | coding (50‑62/1203 nt) | proV → | glycine betaine/proline ABC transporter periplasmic binding protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2804864 | 2804876 | 13 | 58 [0] | [0] 58 | proV | glycine betaine/proline ABC transporter periplasmic binding protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2804863 | 0 (0.000) | 55 (0.830) | 48/286 | 0.7 | 100% | coding (49/1203 nt) | proV | glycine betaine/proline ABC transporter periplasmic binding protein |
| ? | NC_000913 | 2804877 = | 0 (0.000) | coding (63/1203 nt) | proV | glycine betaine/proline ABC transporter periplasmic binding protein | |||||
CAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGT > NC_000913/2804734‑2805026 | tgcctcagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCaaa < 1:176672‑M2/7‑1 (MQ=255)tgcctcagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAat > 1:744902‑M2/144‑151 (MQ=255) cagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATc > 1:663949‑M2/139‑151 (MQ=255) tcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACa > 1:89594‑M2/132‑149 (MQ=255) cagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACa < 2:169654‑M2/18‑1 (MQ=255) cagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACa < 2:900385‑M2/18‑1 (MQ=255) cagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAgg < 2:489132‑M2/21‑1 (MQ=255) atgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACtt > 1:297192‑M2/127‑151 (MQ=255) ttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTc > 1:280445‑M2/124‑150 (MQ=255) gggtagaaaaaagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCaaaa < 2:22163‑M2/31‑1 (MQ=255) agaaaaaagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAAc < 1:727405‑M2/35‑1 (MQ=255) gaaaaaagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAAc > 1:540163‑M2/116‑150 (MQ=255) aaaaaagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACaa < 1:544622‑M2/37‑1 (MQ=255) aaaaaagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACaa < 2:427684‑M2/37‑1 (MQ=255) aaaagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAAt > 2:85696‑M2/113‑151 (MQ=255) aaagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAAtt > 1:362734‑M2/112‑151 (MQ=255) aagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTc < 1:370912‑M2/41‑1 (MQ=255) aagtgactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTc < 1:74259‑M2/41‑1 (MQ=255) gactatttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGa < 2:887122‑M2/45‑1 (MQ=255) atttccattgggtaatatatcgacatagacaagcaaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGaaa < 1:454393‑M2/47‑1 (MQ=255) atttccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGaaaa > 2:924904‑M2/103‑150 (MQ=255) ttncattgggnnntnnatnnncatagacaaataaaggaatctttntattgcatngcaattaaattagaaattaaaaatctttatanaanatttggcgagcGTTCNAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGaana < 1:192561‑M2/48‑1 (MQ=255) tccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACt > 2:722570‑M2/100‑151 (MQ=255) ccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGACAAAACt > 2:783468‑M2/99‑150 (MQ=255) ccattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACt < 1:596203‑M2/52‑1 (MQ=255) cattgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTgg > 1:161881‑M2/98‑151 (MQ=255) attgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTggg < 1:1006635‑M2/55‑1 (MQ=255) attgggtaatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatcttaataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTggg < 2:574432‑M2/55‑1 (MQ=255) aatatatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCg < 2:980820‑M2/61‑1 (MQ=255) atatcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTg > 1:989354‑M2/87‑151 (MQ=255) atcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGc < 2:516877‑M2/67‑1 (MQ=255) atcgacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGc < 2:398264‑M2/67‑1 (MQ=255) gacatagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTa < 1:1024621‑M2/70‑1 (MQ=255) catagacaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTaaa < 2:529141‑M2/72‑1 (MQ=255) acaaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACg > 2:477301‑M2/75‑151 (MQ=255) caaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGc > 1:659202‑M2/74‑151 (MQ=255) aaataaaggaatctttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGcc > 2:132429‑M2/73‑151 (MQ=255) ttctattgcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCAt < 2:228123‑M2/90‑1 (MQ=255) gcatggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAgg < 1:294066‑M2/99‑1 (MQ=255) catggcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCg > 1:683339‑M2/51‑151 (MQ=255) gcaattaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCg > 2:741909‑M2/47‑147 (MQ=255) ttaaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATAttt > 2:636328‑M2/43‑151 (MQ=255) taaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATAttt < 1:308150‑M2/109‑1 (MQ=255) taaattagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATAttt < 1:161483‑M2/109‑1 (MQ=255) attagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGtca < 1:353219‑M2/113‑1 (MQ=255) attagaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGtc > 2:98467‑M2/39‑150 (MQ=255) agaaattaaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGtcatc > 1:697186‑M2/36‑150 (MQ=255) taaaaatctttataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGAt > 2:97502‑M2/30‑151 (MQ=255) tataaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCt < 2:290592‑M2/131‑1 (MQ=255) aaaatatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCgg < 2:64148‑M2/134‑1 (MQ=255) tatttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTaa > 1:1071409‑M2/13‑150 (MQ=255) atttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTaaa < 1:238031‑M2/139‑1 (MQ=255) atttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAAt > 2:415092‑M2/12‑151 (MQ=255) atttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAAt > 1:525627‑M2/12‑151 (MQ=255) ttggcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATcc > 2:198142‑M2/10‑151 (MQ=255) gcgagcGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCcac > 2:837425‑M2/7‑150 (MQ=255) cGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATgg > 1:236586‑M2/2‑150 (MQ=255) cGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGt < 1:742372‑M2/150‑1 (MQ=255) | CAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGT > NC_000913/2804734‑2805026 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |