Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,804,835 Δ7 bp coding (21‑27/1203 nt) proV → glycine betaine/proline ABC transporter periplasmic binding protein

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2804835 2804841 7 138 [0] [0] 138 proV glycine betaine/proline ABC transporter periplasmic binding protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 28048340 (0.000)136 (1.110) 110/290 0.0 100% coding (20/1203 nt) proV glycine betaine/proline ABC transporter periplasmic binding protein
?NC_000913 2804842 = 0 (0.000)coding (28/1203 nt) proV glycine betaine/proline ABC transporter periplasmic binding protein

Only 100 of 138 total aligned reads displayed.

CATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATAT  >  NC_000913/2804687‑2804983
                                                                                                                                                   |                                                                                                                                                     
cATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctt                                                                                                                                                    <  1:1580775‑M1/151‑4 (MQ=255)
 aTCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATcttt                                                                                                                                                   >  2:236683‑M1/1‑147 (MQ=255)
 aTCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATcttt                                                                                                                                                   >  2:1673057‑M1/1‑147 (MQ=255)
   cAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATcttta                                                                                                                                                  <  2:641479‑M1/150‑6 (MQ=255)
     atatTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataa                                                                                                                                               <  2:374828‑M1/151‑9 (MQ=255)
       atTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaa                                                                                                                                              >  1:204615‑M1/1‑141 (MQ=255)
         tCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaat                                                                                                                                            <  2:1232655‑M1/150‑12 (MQ=255)
         tCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaat                                                                                                                                            >  1:1419899‑M1/1‑139 (MQ=255)
          cATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatat                                                                                                                                          >  1:441475‑M1/1‑138 (MQ=255)
           aTGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatt                                                                                                                                         >  1:1482266‑M1/1‑137 (MQ=255)
           aTGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatt                                                                                                                                         >  2:785921‑M1/1‑137 (MQ=255)
            tGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatattt                                                                                                                                        >  1:383192‑M1/1‑136 (MQ=255)
             gCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttg                                                                                                                                       <  1:1713574‑M1/151‑17 (MQ=255)
               cacaTTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggc                                                                                                                                     >  2:1220058‑M1/1‑133 (MQ=255)
               cacaTTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggc                                                                                                                                     >  1:676168‑M1/1‑133 (MQ=255)
                   tttGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagc                                                                                                                                 >  1:429141‑M1/1‑129 (MQ=255)
                    ttGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagc                                                                                                                                 >  1:1214616‑M1/1‑128 (MQ=255)
                      gCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcat                                                                                                                               <  1:439456‑M1/150‑25 (MQ=255)
                        cATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatcca                                                                                                                            <  1:792733‑M1/151‑28 (MQ=255)
                            aGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagc                                                                                                                        >  1:1002834‑M1/1‑120 (MQ=255)
                            aGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagc                                                                                                                        <  1:613321‑M1/151‑32 (MQ=255)
                            aGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagc                                                                                                                        <  2:1189111‑M1/151‑32 (MQ=255)
                               ggTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgag                                                                                                                     <  1:1802288‑M1/151‑35 (MQ=255)
                                gTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTACATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagc                                                                                                                    >  1:1904208‑M1/1‑116 (MQ=255)
                                  agcCTCAGACTCTCAGTATGCTCGGGTAGAAAAAAGTGACTATTTCCATTGGGAAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatcaacagcgagcgt                                                                                                                  >  1:1018695‑M1/2‑114 (MQ=255)
                                   gCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgtt                                                                                                                 <  2:841783‑M1/151‑39 (MQ=255)
                                       cAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttca                                                                                                               <  1:198105‑M1/149‑41 (MQ=255)
                                        aGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaat                                                                                                            <  1:557519‑M1/151‑44 (MQ=255)
                                         gATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaata                                                                                                           <  2:37209‑M1/151‑45 (MQ=255)
                                         gATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaat                                                                                                            >  2:239535‑M1/1‑107 (MQ=255)
                                          aTTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatat                                                                                                          <  2:159037‑M1/151‑46 (MQ=255)
                                            tctcAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatat                                                                                                        >  2:1620195‑M1/1‑104 (MQ=255)
                                            tctcAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatata                                                                                                         <  2:447123‑M1/150‑47 (MQ=255)
                                               cAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatc                                                                                                       <  2:360698‑M1/149‑49 (MQ=255)
                                                  tATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaac                                                                                                   >  1:1894994‑M1/1‑98 (MQ=255)
                                                   aTGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaaca                                                                                                  >  2:753243‑M1/1‑97 (MQ=255)
                                                     gTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaag                                                                                                <  1:340900‑M1/150‑56 (MQ=255)
                                                       tAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaagga                                                                                              <  1:1719644‑M1/150‑58 (MQ=255)
                                                          ggTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggacttt                                                                                          <  2:1603226‑M1/151‑62 (MQ=255)
                                                          ggTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggacttt                                                                                          <  2:340117‑M1/151‑62 (MQ=255)
                                                          ggTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggacttt                                                                                          <  1:87839‑M1/151‑62 (MQ=255)
                                                            tAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttc                                                                                         >  1:1253027‑M1/1‑88 (MQ=255)
                                                             aGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttca                                                                                        <  2:162513‑M1/150‑64 (MQ=255)
                                                             aGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttca                                                                                        <  1:744036‑M1/150‑64 (MQ=255)
                                                              gAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaa                                                                                      <  2:1784687‑M1/151‑66 (MQ=255)
                                                                 aaaaGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaaga                                                                                   <  1:381644‑M1/151‑69 (MQ=255)
                                                                  aaaGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaaga                                                                                   >  2:635481‑M1/1‑82 (MQ=255)
                                                                  aaaGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaaga                                                                                   >  1:733042‑M1/1‑82 (MQ=255)
                                                                     gTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaa                                                                               <  2:1397118‑M1/151‑73 (MQ=255)
                                                                     gTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaa                                                                               <  1:1944449‑M1/151‑73 (MQ=255)
                                                                       gACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaat                                                                             >  2:520504‑M1/1‑77 (MQ=255)
                                                                        aCTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaatt                                                                            >  2:751326‑M1/1‑76 (MQ=255)
                                                                           aTTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattct                                                                          <  1:827251‑M1/150‑78 (MQ=255)
                                                                            tttCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctgg                                                                        >  1:567389‑M1/1‑72 (MQ=255)
                                                                             ttCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctgg                                                                        >  2:227669‑M1/1‑71 (MQ=255)
                                                                               ccATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaa                                                                     <  2:39579‑M1/151‑83 (MQ=255)
                                                                                cATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaa                                                                    <  2:209422‑M1/151‑84 (MQ=255)
                                                                                 aTTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaa                                                                    >  2:894104‑M1/1‑67 (MQ=255)
                                                                                  ttGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaa                                                                   >  1:828020‑M1/1‑66 (MQ=255)
                                                                                    gggTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaact                                                                <  1:561655‑M1/151‑88 (MQ=255)
                                                                                      gTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgg                                                              <  2:815048‑M1/151‑90 (MQ=255)
                                                                                        aaTATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggc                                                            >  2:326581‑M1/1‑60 (MQ=255)
                                                                                           atatCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctat                                                         <  2:1875710‑M1/151‑95 (MQ=255)
                                                                                           atatCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggcta                                                          <  2:1678740‑M1/150‑94 (MQ=255)
                                                                                            tatCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatc                                                        >  1:81066‑M1/1‑56 (MQ=255)
                                                                                             atCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcg                                                       <  2:1003945‑M1/151‑97 (MQ=255)
                                                                                                gACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgctt                                                    <  1:1674483‑M1/151‑100 (MQ=255)
                                                                                                gACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgctt                                                    <  2:1812355‑M1/151‑100 (MQ=255)
                                                                                                  cATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttgg                                                  <  1:1353069‑M1/151‑102 (MQ=255)
                                                                                                   aTAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggc                                                 <  2:878146‑M1/151‑103 (MQ=255)
                                                                                                   aTAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttaaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggc                                                 <  1:615413‑M1/151‑103 (MQ=255)
                                                                                                    tAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcg                                                >  2:971400‑M1/1‑48 (MQ=255)
                                                                                                     aGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgt                                               >  2:104725‑M1/1‑47 (MQ=255)
                                                                                                         aaaTAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaa                                            >  1:778462‑M1/1‑43 (MQ=255)
                                                                                                           aTAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaaga                                         <  1:1220036‑M1/151‑111 (MQ=255)
                                                                                                             aaaGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagac                                        <  2:1361820‑M1/150‑112 (MQ=255)
                                                                                                              aaGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgc                                      >  1:1323439‑M1/1‑38 (MQ=255)
                                                                                                                       ttCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctagcgcttggcgtaaaagacgccagtct                                <  1:1162742‑M1/148‑120 (MQ=255)
                                                                                                                        tCTATTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggc                             <  2:1664395‑M1/150‑123 (MQ=255)
                                                                                                                         cTATTGCATGGCGATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggcc                            >  2:964407‑M1/1‑27 (MQ=255)
                                                                                                                           aTTGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggcc                            <  2:394254‑M1/148‑124 (MQ=255)
                                                                                                                            ttGCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattg                        >  2:527936‑M1/1‑24 (MQ=255)
                                                                                                                              gCATGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaa                      <  2:1041208‑M1/151‑130 (MQ=255)
                                                                                                                                aTGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaaga                    <  1:153403‑M1/151‑132 (MQ=255)
                                                                                                                                aTGGCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattga                       >  1:700110‑M1/1‑20 (MQ=255)
                                                                                                                                  ggCAATTAAATTAGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaa                   <  1:1605179‑M1/150‑133 (MQ=255)
                                                                                                                                     aattaaattaGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcg               >  2:1283256‑M1/1‑15 (MQ=255)
                                                                                                                                     aattaaattaGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcg               <  2:91611‑M1/151‑137 (MQ=255)
                                                                                                                                        taaattaGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgag             <  1:340878‑M1/150‑139 (MQ=255)
                                                                                                                                        taaattaGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcg               >  1:1000190‑M1/1‑12 (MQ=255)
                                                                                                                                         aaattaGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagat           <  2:150200‑M1/151‑141 (MQ=255)
                                                                                                                                         aaattaGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgaga            <  1:933263‑M1/150‑140 (MQ=255)
                                                                                                                                         aaattaGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcg               >  1:98678‑M1/1‑11 (MQ=255)
                                                                                                                                            ttaGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatt        >  2:182712‑M1/1‑8 (MQ=255)
                                                                                                                                             taGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatattt       >  1:1156884‑M1/1‑7 (MQ=255)
                                                                                                                                             taGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatattt       >  1:396589‑M1/1‑7 (MQ=255)
                                                                                                                                             taGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatt        <  2:1267460‑M1/150‑144 (MQ=255)
                                                                                                                                              aGAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatattt       <  2:733055‑M1/150‑145 (MQ=255)
                                                                                                                                               gAAATctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgt     >  2:1596747‑M1/1‑5 (MQ=255)
                                                                                                                                                  aTctttataaaatatttggcgagcatccacagcgagcgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcat  >  1:715775‑M1/1‑2 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
CATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATAT  >  NC_000913/2804687‑2804983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑