| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,578,301 | 0 | A | C | 40.6% | 177.5 / 16.9 | 96 | G142G (GGT→GGG) | gntR | d‑gluconate inducible gluconate regulon transcriptional repressor |
| Reads supporting (aligned to +/- strand): ref base A (49/8); new base C (1/38); total (50/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.09e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTCGAGACGTGCGCCGAGATAGGCAATGTGGCGATGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAACCGTAGTGCGCCAGCATGGTCTGA > NC_000913/3578154‑3578445 | gtcgAGACGTGCGCCGAGATAGGCAATGTGGCGATGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑Accc < 1:814753/151‑1 (MQ=255) gaCGTGCGCCGAGATAGGCAATGTGGCGATGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCAc > 1:1099778/1‑151 (MQ=255) gaCGTGCGCCGAGATAGGCAATGTGGCGATGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCAc > 2:1355432/1‑151 (MQ=255) gTGCGCCGAGATAGGCAATGTGGCGATGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAC‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCCCCACGGGAAT‑ACCCGCCACtt < 1:6510/150‑1 (MQ=255) gTGCGCCGAGATAGGCAATGTGGCGATGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTc > 2:369735/1‑151 (MQ=255) ccGAGATAGGCAATGTGGCGATGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAatc > 2:230383/1‑150 (MQ=255) ccGAGATAGGCAATGTGGCGATGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAatc > 1:1263089/1‑150 (MQ=255) cagagaTAGGCAGTGTGGCGATCCCCGCGAGAAATAATGGCAGTGGTCATCTGGCGTGCTGCTTAAAAGTTATCAAAC‑CCGA‑CGGCAATATCAAGGCGTGGCGTCTTGCTGCCCAC‑CATTC‑CCCCCAGGGAAAT‑CCCCGCCAc < 1:1376985/141‑1 (MQ=255) agaTAGGCAATGTGGCGATGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCt > 1:750489/1‑151 (MQ=255) aTAGGCAATGTGGCGATGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCttt > 1:1027285/1‑151 (MQ=255) aGGCAATGTGGCGATG‑CCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTa > 2:953413/1‑149 (MQ=255) ggCAATGGGGCGATGCCCGCAAGAAAAAGGGGCGTTGTTCTTCGGGCGGGCTGCTTAAAATTTAAAAAAC‑CCGC‑GGGCAATATAAGGGCAGGGCGTTTTGCTGTCCAT‑CATTC‑CCCCCAGGGGAAT‑ACCCGCCACTTCAATCATCTTTaa < 1:198830/150‑1 (MQ=255) gcaaagggggCGATGCCGGCGAAAAAAAAGGGCAGGGGTCTTCGGGCGTGCTGCTTAAAATTTAAAAAAC‑CCGA‑CGGCGATATCAGGGCGTGGCGATTTGCTCTCCAT‑CTGTC‑CCCCCGCGGAAAT‑CCCCGCCACTTCAATCATCTTTAAg < 1:262141/143‑1 (MQ=255) cAATGTGGCGATGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAgg > 1:494132/1‑150 (MQ=255) cAATGTGGCGATGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAgg > 1:386576/1‑150 (MQ=255) aaTGTGGCGATGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTg > 1:723912/1‑151 (MQ=255) aTGTGGCGATGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTgc > 2:847727/1‑151 (MQ=255) ggggCGAGGCCCGCGAGAAATAAGGGCAGTGGTCATCTGGCGGGCTGCTTAAAATTAAAAAAAC‑CCGA‑CGGCGATATCAAGGCAGGCCGATTTGCTTTCCAT‑CGTTC‑CCCCCGGGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTgc < 1:1183892/147‑1 (MQ=255) ggCGATCCCCGCGAGCAATAAGGGCAGTGGTCATCTGGCGTGCTCCTTAAAAGTTATAAAAA‑CCGC‑CGGCAATATCAAGGCATGGCGACTTGCTGCCCAT‑CAGTC‑CCACCACGGAAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGcgcg < 2:1899062/150‑1 (MQ=255) aTGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCgtg > 2:115417/1‑151 (MQ=255) aTGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCAACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCgtg > 1:1446197/1‑151 (MQ=255) tccccGCGCGCAATAAGGGATGTGGTCATTGGGCGTAGTGCTTAAAATTTACCAAAC‑CCGG‑CGGGAATATCAACCCCTGCCTTTTTGCTGTCATT‑CCTTC‑CCCCCCCGGCATT‑CCCCGCCACTTCAATCATCTTTAAGGTGCgcgg < 1:422391/144‑1 (MQ=255) gcgAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGt > 2:692479/1‑150 (MQ=255) cAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTc > 1:1217217/1‑151 (MQ=255) aatagtGGCAGGGTTCATCGGGCGTGCTTCTAAAAAGTTAAAAAAC‑CCGC‑GGGCGATATCAAGGCAGGGCGTTTTGTTGTCCAT‑CATTC‑CCCCCAGGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTAc < 1:771084/146‑1 (MQ=255) aataatGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCg > 2:242272/1‑151 (MQ=255) aaagggCAGTGGTCATCGGGCTTGCTGCTAAAAATTAAAAAAAC‑CCGA‑CGGCAATAAAAAGGCAGGGCGATTTGCTGCCCAT‑CATTC‑CCCCCACGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGt < 2:820539/147‑1 (MQ=255) aatGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTg > 1:1184120/1‑151 (MQ=255) ggCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAgg > 2:1833274/1‑151 (MQ=255) gcgggggTCTTTTGGCGTCCTCCTAAAAAGTAAAAAAAC‑CCGA‑CGGCAATATCAAGGCAGGGCGATTTGCTTTCCAT‑CATTC‑CCACCACGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAg < 1:1325626/144‑1 (MQ=255) cAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGAt > 1:570045/1‑151 (MQ=255) aGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATc > 2:246134/1‑151 (MQ=255) aGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATc > 2:723221/1‑151 (MQ=255) aGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATc > 1:839723/1‑151 (MQ=255) tGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATc > 1:606937/1‑149 (MQ=255) gttCATCGGGCTTGCTGCTTCAAAGTAAAAAAAC‑CCGA‑CGGCAATATCAAGGGATGGCGCCTTGCTGCCCAT‑CATTC‑CCCCCAGGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCa < 1:1247987/147‑1 (MQ=255) tcttCTGGCGTGCTGCTAAAAATTTACAAAAC‑CCGA‑CGGCAATACAAAGGCAGGGCGCTTTTCTGTCCAA‑CAGTC‑CCCCCAGGGGAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAg < 2:910208/145‑1 (MQ=255) tCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGcc > 2:1490693/1‑151 (MQ=255) cATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCg > 2:272407/1‑151 (MQ=255) tCTGGCGGGCTGCTTCAAA‑TTACCAAAACCCGC‑CGGAGAAAGCAAGCCAGGGGGATTTGGTATCCAT‑CACTC‑CCACCACGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGt < 2:632807/136‑1 (MQ=255) tGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCg > 2:1481265/1‑150 (MQ=255) ggtgTGCTCCTAAAAATTTATCAAAC‑CCGC‑CGAAGATATCAAGCCATGGCTATTTGCTTCCCAT‑CAGTC‑CCCCCGCGGAATT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCg < 1:1492706/146‑1 (MQ=255) ggCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGat > 2:1595363/1‑151 (MQ=255) ggCGTGCTGCTAAAAATTTATAAAAC‑CCGA‑CGGCGATAAAAGGGCAGGGCGTTTTGCTCTCCAT‑CAGTC‑CCCCCAGGGGAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCg < 1:260151/149‑1 (MQ=255) ggCGTGCTGCTAAAAATTAAAAAAAC‑CCGC‑GGGCGATAAAAAGGCAGGGCGCTTTGCTGCCCAT‑CAGTC‑CCCCCGGGGGAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCg < 1:1242145/149‑1 (MQ=255) tgctTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTcc > 2:125201/1‑149 (MQ=255) gctTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAgg > 1:692656/1‑151 (MQ=255) gctTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAgg > 1:1683858/1‑151 (MQ=255) gctTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAgg > 2:1948812/1‑151 (MQ=255) tCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAgg > 2:444966/1‑148 (MQ=255) caaaatttaaaaaa‑CCGCCCGGCAATATCAAGCAATGGCGAATTGC‑GTTCATACATTT‑CCACCAGGGAAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAg < 2:1926946/137‑1 (MQ=255) aaaGTTAAAAAAC‑CCGG‑CGGGGATAACAAGGCGTGGCGTTTTGCTTCCCAT‑CATTC‑CCCCCGGGGGAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAg < 1:470917/145‑1 (MQ=255) gTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATg > 1:848042/1‑151 (MQ=255) taccAAAA‑CCGA‑CGGTAATATAAGGGTAACGGGACTCGCTCCACAC‑AAGTC‑CCACCGCGGGCTT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATgg < 2:496712/147‑1 (MQ=255) aataaaac‑CCGA‑GGGAGATACCAGGGCAGGGCGACTTCTTGTCCGT‑CTTTC‑CCCCCACGGGAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGa < 1:488980/147‑1 (MQ=255) aacAAAC‑CCGG‑GGGCGATACCAGGGCTGGGCGTTTTGTTGCCCAT‑‑AGTTCCCCCCAGGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATg < 1:222653/146‑1 (MQ=255) aTCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGAt > 1:1591550/1‑151 (MQ=255) aaac‑CCGC‑CGGCGATATAAGGGCAGGGCGCTTTGCTGCCAAT‑CATTC‑CCCCCACGGGAAC‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGAtt < 1:950681/149‑1 (MQ=255) aaac‑CCGA‑CGGCAATATCAGGGCGGGGCGCCTTGCTCCCCAT‑CATTC‑CCCCCAGGGGAAA‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGAtt < 2:398395/149‑1 (MQ=255) aaac‑CCGA‑CGGCAATATAAAGGCAGGGCGTTTTGCTGTCCAC‑CAGTC‑CCCCCACGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGa < 2:1179482/147‑1 (MQ=255) aaaa‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCg > 1:905852/1‑151 (MQ=255) aacccgacgtaaatatCAAGGCTTGGCGACTTGCTTCCCAT‑CATTC‑CCCCCAGGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCg < 1:192183/138‑1 (MQ=255) ccgccggaaatacCAAGGCGGGGCGTCTTGTTCCCAAT‑CAGTC‑CCCCCGCGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAgg < 1:530058/141‑1 (MQ=255) gA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGt > 1:1961261/1‑151 (MQ=255) ggCGATATCAAGGCATGGCGATTTGCTGCCCAT‑CAGTC‑CCCCCACGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTc < 1:925176/150‑1 (MQ=255) gCGATAGCAAGGCATGGCGACTTGCGGCCCAT‑CAGTC‑CCCCCGGGGGAAG‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCtt < 1:1493336/151‑1 (MQ=255) tatCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTc > 1:248035/1‑151 (MQ=255) cAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCAt > 2:1775601/1‑151 (MQ=255) ggcggggCGCCTTGCTGCCCAC‑CTGTC‑CCCCCGGGGGAAC‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCAt < 1:1909419/143‑1 (MQ=255) ggCAGGGCGATTTGCTTTCCAT‑CAGTC‑CCCCCAGGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTc < 2:1369377/151‑1 (MQ=255) cATGGCGTCTTGCTGCCCAT‑CAGTC‑CCCCCAGGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCg < 2:52397/151‑1 (MQ=255) tGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGt > 2:1852470/1‑151 (MQ=255) ggCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGtt > 1:301271/1‑151 (MQ=255) gACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTtat > 1:1759763/1‑151 (MQ=255) aCTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTtat > 1:973604/1‑150 (MQ=255) cTTGCTGTCCAT‑CAACT‑CCACCACCGGGAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGTGGCGTGTGAGTACGTTCGGTGAGGATCAGTCCATCGATATTCCATGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTtata > 1:1939524/1‑150 (MQ=255) ttGCTGTCCAC‑CATTC‑CCCCCACGGGAAC‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTta < 2:272376/147‑1 (MQ=255) tgctgcCCAT‑CATTT‑CCCCCGGGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATaa < 2:686648/149‑1 (MQ=255) ttctttcccaccgTT‑CCCCCCCGGGAATCCCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTtat < 2:59519/136‑1 (MQ=255) gCTGCCCAT‑CAGTC‑CCCCCAGGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATaa < 2:905868/148‑1 (MQ=255) cTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAACCGt > 2:773154/1‑151 (MQ=255) cTGCCCAT‑CTGTC‑CCACCAGGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAAcc < 2:1102626/149‑1 (MQ=255) tccccAT‑CATTT‑CCCCCAGGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAAc < 2:494141/144‑1 (MQ=255) cAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGACGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGCTTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAACCGTAGTgc > 1:986168/1‑151 (MQ=255) cAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAACCGTAGTGCGcc > 1:1311438/1‑151 (MQ=255) cgttcccaccgCGGGAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAACCGTAGTgcgc < 2:255938/145‑1 (MQ=255) ccccccagGGAAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAACCGt < 1:1694509/135‑1 (MQ=255) ccaccaCGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAACCGTAGTGCGCCAGCAt > 2:1186137/1‑151 (MQ=255) ccccagGGGATT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAACCGTAGTGCGCCAGCATg < 2:570054/149‑1 (MQ=255) caccacGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAACCGTAGTGCGCCAGCATg > 1:1647603/1‑151 (MQ=255) ccacGAGAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAACCGTAGTGCGCCa < 1:1067583/144‑1 (MQ=255) cacGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAACCGTAGTGCGCCAGCATGGTc > 1:1695380/1‑151 (MQ=255) agggaaaT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAACCGTAGTGCGCCAGCATGGTc < 1:1313626/145‑1 (MQ=255) gggAAT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAACCGTAGTGCGCCAGCATGGTCt < 1:869647/149‑1 (MQ=255) ggaaaT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAACCGTAGTGCGCCAGCATg < 2:1194368/142‑1 (MQ=255) ggaaaT‑CCCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAACCGTAGTGCGCCAGCATGGTCTGa < 2:1728313/148‑1 (MQ=255) | GTCGAGACGTGCGCCGAGATAGGCAATGTGGCGATGCCCGCGAGCAATAATGGCAGTGGTCATCTGGCGTGCTGCTTCAAAGTTATCAAAA‑CCGA‑CGGCGATATCAAGGCATGGCGACTTGCTGTCCAT‑CAGTT‑CCACCACGGGAAT‑ACCCGCCACTTCAATCATCTTTAAGGTGCGCGGCGTGTGGGTACGTTCGGTGAGGATCAGGCCGTCGATATTCCAGGAGAGCATGGATTCGAGGCGTTCTTGCTCCATTTCCGGTTTATAACCGTAGTGCGCCAGCATGGTCTGA > NC_000913/3578154‑3578445 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |