New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 925901 =64 (1.020)21 (0.340)
+C		 15/296 6.1 26.4% noncoding (71/88 nt) serW tRNA‑Ser
?NC_000913 = 1097399 54 (0.860)intergenic (+570/+166) ycdU/serX putative inner membrane protein/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

ATAGTAGCGCCCCGTTGCCACCCATGAGGTTTGGTAGCAAAACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGG‑TTCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/926019‑925901
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGG  <  NC_000913/1097399‑1097250
                                                                                                                        ||                                                                                                                                                       
ATAGTAGCCCCCCGTTCCCCCCCATGAGTTTTGGTAAAAAAACAATTTGGGGAGGTGTCCGAGTGGCTGAAGGAGCACGCCGGGAAAGTGTGTATACGGCAACGTATGGGGGG‑TTCGAA‑CCCCCCCCTCACCGCCATATTTAAAGAAGA                                                                                                                            <  1:333488/149‑1
                                   ggaacgaaAATTTGGTGGGGTGCCCGGGGGGCAGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATGGGGGG‑TTCGAA‑CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTG                                                                                      <  1:793479/143‑1
                                   ggaacgaaAATTTGGGGAGGTGTCCGGGTGGCTAAAGGAGCACGCCGGAAAAGTGTGTATACGGCAACGTATGGGGGT‑TTCGAA‑CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATAT                                                                                        <  1:758943/141‑1
                                                GGTGAGGTGTCCGGGTGGGTGAGGGAGCACGCCTGAAAAGTGTGTATACGGAAACGTATCGGGGG‑TTCGAA‑CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGG                                                                          <  1:124332/150‑1
                                                          CCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTAGCGGGGG‑TTCGAA‑CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAG                                                                <  1:302618/150‑1
                                                                 gttaagGGAGCACGCCAGAAAGGGGTGTATACGGCAACATTTCGGGGT‑TTCGAA‑CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGA                                                          <  1:727390/143‑1
                                                                          gcgcgcggGGAAAGTGTTTATACGGCAACGTATGGGGGG‑TTGAAC‑CCCCCCCCTTCCCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCG                                                <  2:58605/142‑1
                                                                           ccCGCCTGAAAAGTGTTTATAGGGAAACGTAGGGGGGT‑TTCAAA‑CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGA                                               <  1:896208/148‑1
                                                                             CGCCTGGAAAGTGTTTACTCGGCAACGTGT‑GGGGG‑TTCCAACCCCCCCCCTCTCCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTC                                                 <  2:1403/146‑1
                                                                               ccgGGAAGGTGTATATACGGAAACG‑ATGGGGGGTTTCGAC‑CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCG                                                <  2:419794/142‑1
                                                                                       GTGTGTATACGGAAACGTTGGGGGGG‑TCCAAC‑CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACA                                   <  2:935960/150‑1
                                                                                           GTATACGGCAACGTGTGGGGGG‑TTCGAA‑CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGC                                 <  2:187698/148‑1
                                                                                             atcCGGAAACGTAGGGGGGG‑TTCGAC‑CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCA                               <  1:888567/145‑1
                                                                                              gagggaagagagtgGGGGG‑TTGGAA‑CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCA                               <  2:738079/133‑1
                                                                                                    agcttcgCGGGGT‑TTCAAA‑CCCCCCCCACACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAG                      <  2:691919/143‑1
                                                                                                         tgcgaaccgctaaAA‑CCCCCCCCCCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACC                   <  1:707136/136‑1
                                                                                                            GGGGT‑TTCAAC‑CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAAC             <  1:936556/151‑1
                                                                                                              GGG‑TTCGAA‑CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGC           <  1:348576/151‑1
                                                                                                                  agccAA‑CCCCCCCCCCGCCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAG         <  2:224783/146‑1
                                                                                                                   tgacacCCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCA          <  2:147920/143‑1
                                                                                                                    caAA‑CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTG       <  2:438315/148‑1
                                                                                                                       A‑CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAA              <  1:222857/140‑1
                                                                                                                         CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCG   <  1:792377/151‑1
                                                                                                                         CCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGG  <  2:300075/151‑1
                                                                                                                        ||                                                                                                                                                       
ATAGTAGCGCCCCGTTGCCACCCATGAGGTTTGGTAGCAAAACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGG‑TTCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/926019‑925901
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGG  <  NC_000913/1097399‑1097250

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.