| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,911,563 | IS1 (+) +9 bp | intergenic (‑38/+268) | pstS ← / ← glmS | phosphate ABC transporter periplasmic binding protein/L‑glutamine:D‑fructose‑6‑phosphate aminotransferase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1978503 = | NA (NA) | 68 (1.060) | 57/298 | 0.2 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 3911563 = | 0 (0.000) | intergenic (‑38/+276) | pstS/glmS | phosphate ABC transporter periplasmic binding protein/L‑glutamine:D‑fructose‑6‑phosphate aminotransferase | |||||
| * | ? | NC_000913 | 3583428 = | NA (NA) | 44 (0.690) | 41/298 | 1.1 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 3911571 | 0 (0.000) | intergenic (‑46/+268) | pstS/glmS | phosphate ABC transporter periplasmic binding protein/L‑glutamine:D‑fructose‑6‑phosphate aminotransferase | |||||
CGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3583555‑3583428‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCTGTGTTTGCAGAAGCAAGCCTGACAGGTGCAGGTGC < NC_000913/3911571‑3911425 CGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTT < 1:896711/151‑1 TGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCTCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTAT > 2:589977/1‑151 GCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATG > 1:538089/1‑151 TTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAA < 2:805195/150‑1 GCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCC < 1:997222/150‑1 GTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCC > 1:697872/1‑151 TACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCA < 2:541143/150‑1 CACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGA < 1:192194/151‑1 ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGAC < 2:353299/151‑1 CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATG > 2:785470/1‑151 GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTT < 1:562696/151‑1 TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTT > 1:332077/1‑150 GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGC < 2:138919/149‑1 GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGC < 1:98818/149‑1 GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAAC < 2:822262/151‑1 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTT < 1:879513/151‑1 AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGT < 1:888487/151‑1 GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTC < 2:512074/151‑1 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCG < 1:560738/151‑1 AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGC < 1:967945/151‑1 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCC > 2:727433/1‑151 GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCG > 1:755050/1‑151 AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGAC > 1:221905/1‑151 ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTT > 1:103886/1‑150 ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTT > 2:177693/1‑150 GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCG > 1:1000371/1‑151 GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATG < 2:146706/151‑1 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGCGCTT > 2:231682/1‑151 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTT > 1:551121/1‑151 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTC > 2:526/1‑151 CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCT > 1:82002/1‑151 CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCT > 1:988267/1‑151 ATACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCTGTGTTTG > 2:929494/1‑151 TACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCTGTGTTTGC > 1:808136/1‑151 ACACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCTGTGTTTGC > 2:417417/1‑150 CACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCTGTGTTTGC > 2:71088/1‑149 ACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCTGTGTTTGCAGA < 2:387817/151‑1 ACTAAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCTGTGTTTGC > 2:550433/1‑148 AAATCAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCTGTGTTTGCAGAA < 2:349948/149‑1 CAGTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCTGTGTTTGCAGAAGCAAGC > 2:625107/1‑151 GTAAGTTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCTGTGTTTGCAGAAGCAAGCCT > 2:578818/1‑151 TTGGCAGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCTGTGTTTGCAGAAGCAAGCCTGAC > 2:13232/1‑149 AGCATCACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCTGTGTTTGCAGAAGCAAGCCTGACAGGTGC > 1:349831/1‑150 CACCCTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCGTATCGATGAGTGCTTGCTCTGTGTTTGCAGAAGCAAGCCTGACAGGTGCAGGTGC < 2:721239/151‑1 CGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3583555‑3583428‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCGTAGCCAACAAACAATGCTTTATGAATCCTCCCAGGAGACATTATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCTGTGTTTGCAGAAGCAAGCCTGACAGGTGCAGGTGC < NC_000913/3911571‑3911425 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |