| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,825,056 | 0 | G | A | 43.5% | 79.2 / 30.3 | 62 | intergenic (‑119/+84) | ves/spy | cold‑ and stress‑inducible protein/periplasmic ATP‑independent protein refolding chaperone, stress‑induced |
| Reads supporting (aligned to +/- strand): ref base G (27/8); new base A (0/27); total (27/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.53e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GACATTTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAA > NC_000913/1824909‑1825203 | gACATTTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGagaaa < 2:137848/151‑1 (MQ=255) aCATTTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGagaaa > 1:720170/1‑150 (MQ=255) aTTTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGagaaaaga < 2:271805/151‑1 (MQ=255) aTTTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGagaaa > 2:620666/1‑148 (MQ=255) ttACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTGCAACTGTTTTAG‑AAGagaaaagaa < 1:558192/149‑1 (MQ=255) tACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAAc > 2:577626/1‑151 (MQ=255) aCGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAAc < 2:246898/150‑1 (MQ=255) cGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAAccg < 1:805627/151‑1 (MQ=255) gCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAAccgc > 2:508765/1‑151 (MQ=255) cATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAAccgcc > 2:1002949/1‑151 (MQ=255) tCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGa < 1:151277/149‑1 (MQ=255) cAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATcc > 2:861304/1‑151 (MQ=255) aaaGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCt > 1:795372/1‑151 (MQ=255) aaGTATTCCATACCCGCCCCCGGCCCTTTTTTTTCATTGTTATCGTTCAGGTAACGGTGGATGTTTATCGGCACCGGGGGTGATTTACGTTAGGGGTGATCAGTTTTTTTTTACAACTGTTTGAG‑AAGAAAAAAAAAAACCGCCGATCCTg < 1:727845/151‑1 (MQ=255) aGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGt > 2:780448/1‑151 (MQ=255) ccATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCg > 2:365533/1‑151 (MQ=255) cccccgcccGGCCGGTTTTTTTCATTGTTTTCATTGGGGTACGCGTGTAGGGTTATCGCCAGGTGGGGTGTTTTTCGTTGGTGATGATGGGGTTTTTTTTACATGTGTTGGGA‑AAGGAAAAAAAAAGCCGCCGATCCTGTCCACCGCa < 1:586668/142‑1 (MQ=255) cTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCAtt > 1:45397/1‑150 (MQ=255) cTCCGGCCCCTTTTTTTTCATTTTTATCGTTCAGTTAACCGTGGATGTTTATCGGCAACTGGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTTACAACTGTTGGAG‑AAGAGAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTg < 2:1091401/150‑1 (MQ=255) cccGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCa > 2:992274/1‑150 (MQ=255) ccGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCa > 2:900696/1‑149 (MQ=255) ccGACCCGTTTTTTTAATGGTGTTCTTCAAGGAAACCGGGGTTGGTTATCGACAATTCGGGTGATTTGCTTGAGTGGGGATCAGCTTTTTTTTACAAGTTTTGGGA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTg < 1:830593/147‑1 (MQ=255) ccGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGt > 1:796940/1‑151 (MQ=255) gTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTgg > 1:830586/1‑151 (MQ=255) ttCTTTTCATTGTTATCGTTCAGTTACCCGGGGATGGTTATCGGCAACTGGGGTGATTTACTTTAGTGGTGATCAGGTTTTTTTTACAACTGTTTGAG‑AAGAAAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTg < 1:1085119/149‑1 (MQ=255) ttCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTg > 2:1016111/1‑149 (MQ=255) tCTTTTCATTTTTATCGTTCAGTTAACCGGGGATGTTTATCGGCAACTGGGGTGATTTGCGTTAGTGGTGATCAGGTTTTTTTTACACCTTTTTGAG‑AAGAAAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGa < 1:334527/150‑1 (MQ=255) ttatgtttCGGGTACCGGTGGATGTTTACCGGAAACTGGGGTGATTTACGTTAGTGGTGATCAGTTTTTTTTTACAATTGTTGGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcggcg < 1:1015989/144‑1 (MQ=255) ttCAGGTAACGGTGGATGGTTATCGGCAACTGGGGTGTTTTACTTTAGTGGTGATCGGTTTTTTTTTACAACTGTTGAAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCt < 1:1117590/148‑1 (MQ=255) ttCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCtt > 1:391367/1‑149 (MQ=255) cAGGTACCCGGGGATGGTTATCGGCACCCGGGGTGTTTTACGTTAGTGGTGACCGGGTTTTTTTAACACCTTTTGGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGt < 1:863085/151‑1 (MQ=255) ggTACCGGTGGTTGGTTATCGGAAACTGGGGTGTTTTACGTTAGTGGGGATCAGGTTTTTTTTACAACTTTTTGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAg < 2:615476/148‑1 (MQ=255) ggTACCCGTGGATGGTTATCGGAAACTGGGGTGTTTTACGTTAGTGGTGATCAGGTTTTTTTTACAACTGTTTGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGtt < 1:522299/150‑1 (MQ=255) ccGTGGATGTTTATCGGCAACTGGGGTGATTTACGTTAGTGGTGATCGGGTTTTTTTTACAACTTTTGGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTg < 1:393336/150‑1 (MQ=255) gATGTTTATCGGCAACTGGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTTACATCTTTTTGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTg < 1:644872/149‑1 (MQ=255) gttttccgacAACTGGGGTGTTTTACGTTAGTGGTGATCAGTTTTTTTTTACAACTTTTGGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAg < 1:1002927/141‑1 (MQ=255) gtttATCGGCAACTCGGTTGTTTTACGTTAGTGGTGATCGGGTTTTTTTTACAACTTTTTGAA‑AAGAAAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAg < 2:539848/148‑1 (MQ=255) ttATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGatt > 1:817330/1‑151 (MQ=255) ttATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGatt > 2:486191/1‑151 (MQ=255) ggCACCTCGGTTGATTTACGTTAGTGGTGATCAGTTTTTTTTAACAATTGTTTGAG‑AAAAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGatta < 1:280621/147‑1 (MQ=255) gacaccTCGGTTAATTTACGTGAGTGTTGACCGGGTTTTTTTAACATCTGTTGGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGatt < 1:422804/141‑1 (MQ=255) acctggggTAATTTGCGTTGGTGGTGATGTGGTTTTTTTTACACCTTTTTAAG‑AAAAAAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTcagc < 2:957820/145‑1 (MQ=255) aaCTGGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTTACAACTTTTTGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTcag < 1:620652/149‑1 (MQ=255) gggttgttttACGTAAGTGGTGTTCAGTTTTTTTTAACAATTTTTAGAG‑AAAAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTca < 1:237721/137‑1 (MQ=255) cGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTg > 2:476866/1‑151 (MQ=255) gggtgttttcgtttAGGGGTGATCAGTCTTTTTTTACAGATTTTAAAG‑AGGAGAAAAGAAACCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGtt < 1:457545/137‑1 (MQ=255) gggTGATTTACGTTAGGGGTGAAAAGTCTTTTTTTAGACGGGTTGGAG‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGc < 2:851867/151‑1 (MQ=255) gTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGc > 1:530173/1‑149 (MQ=255) tttACTTTAGTGGTGATCAGTTTTTTTTTACAACTGTTTGAG‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAgg < 1:124397/148‑1 (MQ=255) tttACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTTAGCAGTTGCAGGCAt > 1:326206/1‑151 (MQ=255) tttACGTTAGGGGTGATAAGTTTTTTTTTACAATTTTTTGAA‑AAAAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGc < 1:12230/149‑1 (MQ=255) aCGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCAtttt > 1:213119/1‑151 (MQ=255) ttAGTGGTGATCAGGTTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTa < 2:249258/149‑1 (MQ=255) gtgttgATCAGTTTTTTTTAACACCTG‑TTGAGAAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTAc < 1:462921/147‑1 (MQ=255) ggtgATCAGTCTTTTTTTACAACTGTTGGAG‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCtttt < 2:316070/150‑1 (MQ=255) tgATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGcc > 2:150531/1‑151 (MQ=255) gATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGcc > 1:396133/1‑150 (MQ=255) aGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCCGCTGCAGGCATTTTACCTTTTGCCGCTgg > 2:900829/1‑151 (MQ=255) ggttttttttAAAACTTTTTGAA‑AAGAAAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCg < 2:147479/143‑1 (MQ=255) tttttttACAACTGTTTGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGAc < 1:1117261/149‑1 (MQ=255) ttttttACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGGCTTAAGTTTTTTTGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTAACTTTTTCCGCTGGAAGtt > 1:65603/1‑151 (MQ=255) ttttttACAACTGTTTGAG‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGt < 2:120780/150‑1 (MQ=255) tttttACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGCCTTAAGTTTTTTGGCTGCAAGGTTATTCAGCCGTTTCAGGCATTTTACCTTTTTCCGc > 1:194400/1‑142 (MQ=255) ttACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGt > 1:546421/1‑151 (MQ=255) aCAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGt > 1:143068/1‑149 (MQ=255) aaCTGTTTGAG‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAg < 2:124494/150‑1 (MQ=255) tGTTTGAG‑AAGAGAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGAc < 1:128490/149‑1 (MQ=255) ttgaag‑aagagaaAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAg < 1:308405/141‑1 (MQ=255) g‑aagagaaAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTTGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTTCCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCa > 1:230930/1‑150 (MQ=255) agagaagaaaaaaaaACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCTCTGGACGTTCTGTCAGACGCTtct < 1:1041095/144‑1 (MQ=255) aagagaaAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCaa > 2:93356/1‑150 (MQ=255) aagaaaaAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCaa < 2:455778/150‑1 (MQ=255) agagaaAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCaaa > 1:491247/1‑150 (MQ=255) agagaaAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCaaa > 1:324509/1‑150 (MQ=255) agagaaAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCaaaa < 2:958122/151‑1 (MQ=255) gagaaAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTTAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCaaaa > 2:777095/1‑150 (MQ=255) | GACATTTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAA > NC_000913/1824909‑1825203 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |