Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,538,109 | 0 | A | C | 46.8% | 117.5 / 31.8 | 77 | G219G (GGT→GGG) | nanM | N‑acetylneuraminic acid mutarotase |
Reads supporting (aligned to +/- strand): ref base A (37/4); new base C (0/36); total (37/40) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.01e-17 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ATCCCCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGAT > NC_000913/4537960‑4538255 | aTCCCCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCa < 2:43018/150‑1 (MQ=255) tCCCCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCAcc > 2:226286/1‑151 (MQ=255) cAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTAtt < 2:741880/151‑1 (MQ=255) aaaaCCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑c > 2:774042/1‑151 (MQ=255) aaaCCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑c > 2:869913/1‑150 (MQ=255) aCCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑caca < 1:890281/151‑1 (MQ=255) ccAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAAccg > 2:964902/1‑151 (MQ=255) tACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCCCCTTTATT‑CACAAccgccg < 1:468592/149‑1 (MQ=255) tACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACcgccgc > 1:389216/1‑150 (MQ=255) ccATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCAcc > 2:874003/1‑149 (MQ=255) aTCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGcc > 2:248911/1‑151 (MQ=255) cTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGt > 2:845708/1‑151 (MQ=255) ggggatgaGACGGGAGCAAGCTTTTTCCATTTTAATTTTTTACCGGTAAAATCAATTTCAAATACGGCTC‑CCGTCCGCAATCCGGGTTG‑GG‑C‑TTCGCCATTAATAAGCCAGT‑TTTT‑ACCCCCTTTATC‑CACAACCGCCGCACCAGcc < 1:1062275/144‑1 (MQ=255) gaCGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTAcc > 2:59515/1‑149 (MQ=255) gggAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGc > 1:427881/1‑151 (MQ=255) gggAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTACT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGc > 2:2290/1‑151 (MQ=255) gggAGCAAGCTTATTCCATTTAAAATTATTCCCGGTAAAATCAATTCAAAATCCGGCAC‑CCTTTCCCATCCCTGTTTG‑GC‑C‑TTCCCCATAAAAAACCCAGG‑TTTT‑ACCCCCTTTATC‑CACACCCGCCGCACCAGCCGTTCCGTACCAGGGc < 1:338798/151‑1 (MQ=255) gggAGAAAGTTTATCCCTTTTAAAATTATTCCCGGTAAAACCAATTTAAAATCCGGCAC‑CCTTCCGCAACCCTGGTTG‑GG‑T‑TCCCCCATTAAAAAGCCAGT‑TTTT‑TCCCCCTTTTTA‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGc < 1:591948/151‑1 (MQ=255) gggAGAAAGCTTTTTCATTTTAAAATTATTCCCGGTAAAACCAATTTAAAATACGGCAT‑CCGTTCGCAACCCTGTTTT‑GG‑C‑TTCGCCATTAATAAGCCAGT‑TTTT‑ACCCCCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAgg < 2:976789/149‑1 (MQ=255) cAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTc > 2:703991/1‑151 (MQ=255) aggCTTCTTCAATTTAAAATTATTCCCGGTAAAATAAATTGCAAATACGGTTG‑CTGTTCGAAACCCTGTTGT‑GG‑C‑TTCGCCATGAA‑AACGCAGG‑TTTTCATCCCTTTTAGA‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTc < 2:1066216/148‑1 (MQ=255) aaGTTTTTTCCTTTTAAAATTATTCCGGGTAAAACAAATTAAAAATACGCCAC‑CCGTCCGAAACCCTGTTTT‑GG‑C‑TTCGCCTTTAATAAGCCAGG‑TTTT‑ATCCCTTTTATT‑CAAACCCGCCGCACCAGCCGTTCCGTACCAGGGCGAtt < 1:795901/149‑1 (MQ=255) aaGTTTATTCCATTTTAAATTATTCCCGGTAAAATCAAGTTCAAATACGGCAC‑CCTTTCGCAATCCTGTTTT‑GG‑C‑TTCGCAATTAATAAGCCAGG‑TTTT‑ATCCCTTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTc < 2:411511/150‑1 (MQ=255) aTTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCg > 1:826990/1‑151 (MQ=255) ttCCATTTTAAATTATTCCCGGGAAAATCAAGTTAAAATACGGCAT‑CCGTTCGCAATCCGGGTTT‑GG‑T‑TTCGCCATTAAAAAGCCAGT‑TTTT‑ATCCCTTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGc < 2:951806/149‑1 (MQ=255) ttCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGt > 2:256963/1‑151 (MQ=255) ttCCATTTAAAATTATTCCCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGTTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCCCCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCg < 2:780022/150‑1 (MQ=255) cATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAAc > 2:194695/1‑151 (MQ=255) tttaAAATTATTCCCGGTAAAATAAATTTAAAATCCGGCAC‑CCTTTCGAAATCCTGTTTT‑GG‑T‑TTCCCCATTAATAAGCCAGG‑TTTT‑ATCCCCTTTATC‑CAAACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTaa < 2:1114506/148‑1 (MQ=255) tttAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTcc > 1:914365/1‑151 (MQ=255) aaaTTATCCCCGGAAAAACAATGTTCAAAT‑CCGCATCCCGTTC‑CAATCCTGGTTT‑GGCC‑TTCCCCTTAAATACCCGGGT‑TTTT‑CTCCCTTTTTTC‑CAAACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCAtt < 1:378279/151‑1 (MQ=255) attcCCGGTAAAATCAATTACAAATACGGCAT‑CCGTTCGCAATCCTGTTTT‑GG‑C‑TTCCCCATAAATAACCCGGT‑TTTT‑ACCCCCTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCtgt < 2:673035/151‑1 (MQ=255) ttcccGGTAAAATCAAGTTCAAATCCGGCAT‑CCGTCCGCAATCCTGTTTT‑GG‑C‑TTCGCCATTAAAAAGCCAGT‑TTTT‑ATCCCCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCtgt < 2:167996/147‑1 (MQ=255) taCCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTgtgt > 1:620044/1‑151 (MQ=255) taCCGGTAAAATCAAGTTAAAATACGGCAT‑CCGTTCGAAATCCTGTTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ACCCCCTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCtgtg < 2:680275/150‑1 (MQ=255) ccGGTAAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAACCCTGGTTT‑GG‑T‑TCCGCCATTAATAAGCCAGT‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTCCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCtgt < 1:934646/147‑1 (MQ=255) ccGGTAAAATAAATTTAAAATACGGCAT‑CCGTTCGCAATCCTGTTTG‑GG‑C‑TTCGCCATAAATAAGCCTGT‑TTTT‑ATCCCCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGtt < 2:511776/150‑1 (MQ=255) cGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTg > 1:491505/1‑150 (MQ=255) ggTGAAATCAAGTTCAAATCCGGCAT‑CCTTTCGCAACCCTGGTTG‑GG‑C‑TTCCCCATTAATAACCCGGT‑TTTT‑ATCCCCTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAg < 2:347966/151‑1 (MQ=255) ggTAAAATCATGTTAAAATGCGGC‑C‑CCGGTCCCAATTCCGGTTT‑TG‑CTTTCGCCATTAAAAACCCAGT‑TTTT‑CCCCCTTTTTTC‑CCCAGCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTg < 1:867373/149‑1 (MQ=255) gAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAggg > 2:332057/1‑150 (MQ=255) aaaTCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGAt > 1:1012261/1‑151 (MQ=255) aaTCAAGTTAAATTCCGGCAC‑CCTTCCGAAATCCGGTTTT‑GG‑C‑TCCGCCATTAATAAGCCGGG‑TTTT‑ACCCCCTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATc < 2:946681/151‑1 (MQ=255) tCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCa > 2:162647/1‑150 (MQ=255) cAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaa > 2:713338/1‑150 (MQ=255) aaGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaaa > 1:403917/1‑150 (MQ=255) aaGGTCAAATACGACAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaaa > 1:608372/1‑150 (MQ=255) gTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaaa > 2:856078/1‑148 (MQ=255) ttCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGac > 2:623927/1‑151 (MQ=255) aaaTCCGGCAC‑CCGTCCGCAATCCTGGTTT‑GG‑T‑TTCGCAATTAAAAAGCCAGT‑TTTT‑ACCCCCTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGaca < 2:494131/149‑1 (MQ=255) aaaTACGGCCT‑CCGTTCGCAATCCTGTTTT‑GG‑T‑TTCGCCATTAATAAGCCAGT‑TTTT‑ATCCCCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGacaa < 2:538059/150‑1 (MQ=255) aaaTACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGacaac > 1:172452/1‑151 (MQ=255) aaTCCGGCAC‑CCGTTCGCAATCCTGTTTT‑GG‑C‑TTCCCCATAAAAAGGCCAGT‑TTTT‑ACCCCCTTTATC‑CCCAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGacaaca < 1:586870/151‑1 (MQ=255) aCGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGa > 2:1089168/1‑150 (MQ=255) cAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACtt > 2:555941/1‑151 (MQ=255) cctttCGCACCCCTGTTTT‑GG‑C‑TTCCCAATAAATAAGCCAGT‑TTTT‑ATCCCTTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACt < 2:33238/144‑1 (MQ=255) cctttCGCAATCCTGGTTT‑GG‑T‑TTCCCCATTAAAAAGCCGGT‑TTTT‑ACCCCTTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTAt < 1:147162/147‑1 (MQ=255) gTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTg > 1:506596/1‑150 (MQ=255) ttCGCAATCCTGTTTT‑GG‑T‑TTCGCCATTAAAAAGCCGGT‑TTTT‑ATCCCCTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTga < 2:714713/150‑1 (MQ=255) ttCGC‑ATCCTGGTTTGGG‑C‑TTCCCCATAAAAAAGCCAGT‑TTTT‑ATCCCTTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTg < 1:912144/149‑1 (MQ=255) ccTGTTTT‑GG‑C‑TTCCCCATTAATAAGCCAGT‑TTTT‑ATCCCCTTTATT‑CCCAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAaata < 2:24206/149‑1 (MQ=255) ccTGTTTT‑GC‑C‑TCCCCAATAAATAGGCCGGT‑TTTT‑ACCCCCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGaaa < 1:1072838/147‑1 (MQ=255) ttt‑GG‑T‑TTCGCCTTTATTAAGCCAGT‑TTTT‑ATCCCCTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAAtc < 2:768477/147‑1 (MQ=255) gg‑C‑TTCGCCATTAAAAACCCAGT‑TTTT‑ATCCCTTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTg < 2:730407/149‑1 (MQ=255) cGCCATTAAAAAGCCAGG‑TTTT‑ACCCCTTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCtttt < 2:294279/149‑1 (MQ=255) gCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTg > 2:535428/1‑151 (MQ=255) cccATTAAAAAGCCCGGTTTTT‑ATCCCTTTTTTC‑CAAAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCtttttt < 1:975899/150‑1 (MQ=255) cccAATAAAAAGGCAGG‑TTTT‑TACCCCTTTTTTCCACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCtttttt < 1:39512/150‑1 (MQ=255) ccATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGt > 2:737794/1‑151 (MQ=255) ttAAAAAGCCAGT‑TTTT‑ATCCCTTTTATC‑CACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGt < 2:263163/148‑1 (MQ=255) ataaGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCaaaa > 1:649126/1‑150 (MQ=255) ataaGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAAt > 1:398711/1‑151 (MQ=255) aaaacccAGT‑TTTT‑ACCACTTTTTGC‑CACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAAt < 1:541432/146‑1 (MQ=255) aaGCAAGT‑TTTT‑ATCCCTTTAATT‑CACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATa < 1:994566/150‑1 (MQ=255) gCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTg > 2:782469/1‑151 (MQ=255) aGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGc > 1:183231/1‑151 (MQ=255) tttt‑ATCCCCTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCAt < 2:566900/150‑1 (MQ=255) t‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGAt > 1:1070038/1‑151 (MQ=255) | ATCCCCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCAT‑CCGTTCGCAATCCTGGTTT‑GG‑C‑TTCGCCATTAATAAGCCAGG‑TTTT‑ATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGAT > NC_000913/4537960‑4538255 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |