Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,293,015 IS1 (+) +8 bp intergenic (‑93/‑505) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)71 (1.030) 62/298 0.2 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 1293015 = 0 (0.000)intergenic (‑93/‑512) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 = 258675NA (NA)75 (1.090) 60/298 0.2 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 1293022 0 (0.000)intergenic (‑100/‑505) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

Only 100 of 146 total aligned reads displayed.

CTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGC  >  NC_000913/1292872‑1293172
                                                                                                                                                      |                                                                                                                                                      
cTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTg                                                                                                                                                        >  1:708131/1‑151 (MQ=255)
agcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTg                                                                                                                                                        >  1:571596‑M2/144‑151 (MQ=255)
    gcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCt                                                                                                                                                    >  2:849976‑M2/140‑151 (MQ=255)
     cataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCtt                                                                                                                                                   >  2:9025‑M2/139‑151 (MQ=255)
     cACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtg                                                                                                                                                    <  1:874376‑M2/150‑5 (MQ=255)
      aCGAAGAGTATGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgat                                                                                                                                                  >  2:578442‑M2/1‑145 (MQ=255)
        gAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgc                                                                                                                                                >  1:331748‑M2/1‑143 (MQ=255)
        gAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatg                                                                                                                                                 <  1:883995‑M2/150‑8 (MQ=255)
        aacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTa                                                                                                                                                 <  2:871724‑M2/15‑1 (MQ=255)
        aacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTAt                                                                                                                                                <  2:427293‑M2/16‑1 (MQ=255)
         acctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTAtt                                                                                                                                               >  2:217975‑M2/135‑151 (MQ=255)
         aaGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgct                                                                                                                                               >  1:500329‑M2/1‑142 (MQ=255)
         aaGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgct                                                                                                                                               >  1:210507‑M2/1‑142 (MQ=255)
                cGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaact                                                                                                                                        <  2:269224‑M2/151‑17 (MQ=255)
                 ctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTgccg                                                                                                                                       >  1:507384‑M2/127‑151 (MQ=255)
                 ctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTgccg                                                                                                                                       >  2:951426‑M2/127‑151 (MQ=255)
                   gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTgccgcc                                                                                                                                     >  1:573124‑M2/125‑151 (MQ=255)
                    tgttgtTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttact                                                                                                                                    <  2:266648‑M2/151‑21 (MQ=255)
                     gttgttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactg                                                                                                                                   >  2:1002850‑M2/1‑130 (MQ=255)
                        agcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCaata                                                                                                                                 >  2:143633‑M2/120‑150 (MQ=255)
                         gcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCaataaa                                                                                                                               <  1:631518‑M2/33‑1 (MQ=255)
                           cAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgattta                                                                                                                              >  1:746080‑M2/1‑124 (MQ=255)
                           cAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgattt                                                                                                                               <  2:886770‑M2/149‑26 (MQ=255)
                           cAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgattt                                                                                                                               <  2:380580‑M2/149‑26 (MQ=255)
                             gAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtg                                                                                                                           <  1:935320‑M2/151‑30 (MQ=255)
                               ggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCtt                                                                                                                         <  1:555486‑M2/39‑1 (MQ=255)
                                 tttAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatg                                                                                                                       <  1:147173‑M2/151‑34 (MQ=255)
                                   cggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCa                                                                                                                     <  1:1017246‑M2/43‑1 (MQ=255)
                                    ggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTc                                                                                                                      <  2:159764‑M2/42‑1 (MQ=255)
                                     aGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatgg                                                                                                                   <  1:657329‑M2/151‑38 (MQ=255)
                                     aGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatgg                                                                                                                   >  1:962350‑M2/1‑114 (MQ=255)
                                        gCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgt                                                                                                                >  1:363947‑M2/1‑111 (MQ=255)
                                         ggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAAt                                                                                                               <  1:449194‑M2/49‑1 (MQ=255)
                                         cTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtt                                                                                                               <  2:928103‑M2/151‑42 (MQ=255)
                                         cTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgt                                                                                                                >  1:331821‑M2/1‑110 (MQ=255)
                                           tCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtt                                                                                                               >  2:277331‑M2/1‑108 (MQ=255)
                                           acggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAAtt                                                                                                              >  1:637713‑M2/101‑150 (MQ=255)
                                            cggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAAtt                                                                                                              >  1:451636‑M2/100‑149 (MQ=255)
                                            cGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgttttt                                                                                                            <  2:459165‑M2/151‑45 (MQ=255)
                                            cGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgttttt                                                                                                            >  2:564871‑M2/1‑107 (MQ=255)
                                             gCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                                                                           >  1:283677‑M2/1‑106 (MQ=255)
                                                cATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag                                                                                                         >  1:1010261‑M2/1‑103 (MQ=255)
                                                 aTTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt                                                                                                       <  2:245810‑M2/151‑50 (MQ=255)
                                                 aTTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt                                                                                                       <  1:1058224‑M2/151‑50 (MQ=255)
                                                       gtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAg                                                                                                   <  2:931397‑M2/61‑1 (MQ=255)
                                                        tcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAc                                                                                                 <  2:478797‑M2/63‑1 (MQ=255)
                                                        taATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcca                                                                                                 >  1:663119‑M2/1‑95 (MQ=255)
                                                         cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgc                                                                                               <  1:791552‑M2/65‑1 (MQ=255)
                                                          aTCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtg                                                                                              <  2:969593‑M2/151‑59 (MQ=255)
                                                           ttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCgg                                                                                             >  1:327862‑M2/85‑151 (MQ=255)
                                                               caaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCata                                                                                         <  2:260372‑M2/71‑1 (MQ=255)
                                                                     cggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGccc                                                                                   <  2:891593‑M2/77‑1 (MQ=255)
                                                                            ggtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagc                                                                            >  1:308816‑M2/1‑75 (MQ=255)
                                                                              tgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTacac                                                                          >  2:306161‑M2/66‑151 (MQ=255)
                                                                               gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAcc                                                                         >  2:604122‑M2/65‑151 (MQ=255)
                                                                                   tgttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccct                                                                     <  2:52720‑M2/151‑84 (MQ=255)
                                                                                   gacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgatg                                                                     <  2:765015‑M2/91‑1 (MQ=255)
                                                                                           taataaTAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc                                                              <  2:393585‑M2/150‑91 (MQ=255)
                                                                                           catcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgca                                                             <  1:420898‑M2/99‑1 (MQ=255)
                                                                                             tcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgca                                                             >  1:834550‑M2/51‑149 (MQ=255)
                                                                                               gggcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCAc                                                         <  2:1042236‑M2/103‑1 (MQ=255)
                                                                                               aataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagcta                                                         >  2:904053‑M2/1‑56 (MQ=255)
                                                                                               aataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagcta                                                         >  1:762963‑M2/1‑56 (MQ=255)
                                                                                                 gcattatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGt                                                       >  1:710264‑M2/47‑151 (MQ=255)
                                                                                                  agagCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactg                                                      >  2:233464‑M2/1‑53 (MQ=255)
                                                                                                     tatctgaacataaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAgg                                                   >  2:354630‑M2/43‑151 (MQ=255)
                                                                                                             ttCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtg                                           <  2:735673‑M2/151‑110 (MQ=255)
                                                                                                                aaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTcc                                        >  2:956060‑M2/32‑151 (MQ=255)
                                                                                                                aaaacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTcc                                        >  1:234931‑M2/32‑151 (MQ=255)
                                                                                                                  aacactatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTg                                      <  2:444382‑M2/122‑1 (MQ=255)
                                                                                                                     tgCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacgg                                   <  2:523941‑M2/151‑118 (MQ=255)
                                                                                                                     actatcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAtt                                   >  2:754722‑M2/27‑151 (MQ=255)
                                                                                                                        atcaataagttggagtcattgccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCa                                 <  2:176666‑M2/127‑1 (MQ=255)
                                                                                                                        atcaataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTc                                  <  1:911798‑M2/126‑1 (MQ=255)
                                                                                                                           aataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATATTTTCATAAAATTAGCCAGAAAAGACGCGGAATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATg                               >  2:699109‑M2/21‑149 (MQ=255)
                                                                                                                           aGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaa                               <  1:842065‑M2/149‑122 (MQ=255)
                                                                                                                           aGCCAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaa                               <  1:797185‑M2/149‑122 (MQ=255)
                                                                                                                            ataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTc                             >  1:74822‑M2/20‑150 (MQ=255)
                                                                                                                            ataagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTc                             >  1:163885‑M2/20‑150 (MQ=255)
                                                                                                                             taagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTcac                           >  1:187132‑M2/19‑151 (MQ=255)
                                                                                                                              cAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcac                          <  2:291588‑M2/151‑127 (MQ=255)
                                                                                                                              cAGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcac                          <  1:436115‑M2/151‑127 (MQ=255)
                                                                                                                              aagttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTcaca                          <  1:192595‑M2/134‑1 (MQ=255)
                                                                                                                               aGGAATGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcacc                         <  1:23124‑M2/151‑128 (MQ=255)
                                                                                                                                 ttggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAttt                       >  2:835503‑M2/15‑151 (MQ=255)
                                                                                                                                   ggagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAtttt                      <  1:717826‑M2/138‑1 (MQ=255)
                                                                                                                                   aTGTAAGGAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccg                     <  1:447391‑M2/151‑132 (MQ=255)
                                                                                                                                    gagtcattaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTAt                    >  1:953708‑M2/12‑151 (MQ=255)
                                                                                                                                    gaggcattaccCAAAATTGTTCTTTATTTTTTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGGCGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGATTAAAACTTCCTGATGCATGTCACATTTTa                     <  2:28051‑M2/139‑1 (MQ=255)
                                                                                                                                       gtttgttggctacgagggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggaca                 >  2:825571‑M2/16‑16 (MQ=255)
                                                                                                                                          tgttggctacgagggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatc               >  2:107385‑M2/13‑13 (MQ=255)
                                                                                                                                          gAATTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatc               <  2:1002133‑M2/150‑138 (MQ=255)
                                                                                                                                            aTTCAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagc            <  2:369479‑M2/151‑141 (MQ=255)
                                                                                                                                               cAAAATTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgc          >  2:790870‑M2/1‑8 (MQ=255)
                                                                                                                                               cAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTAt         <  1:217392/151‑1 (MQ=255)
                                                                                                                                                  acgagggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgcctgacatcagcgctat       >  2:696786‑M2/5‑5 (MQ=255)
                                                                                                                                                  aaTTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACTCCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGt      <  2:972220/151‑1 (MQ=255)
                                                                                                                                                    ttGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctc    <  1:698426‑M2/151‑149 (MQ=255)
                                                                                                                                                    gagggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctc    <  2:878882‑M2/149‑149 (MQ=255)
                                                                                                                                                      gTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGc  <  2:1063146/151‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
CTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGC  >  NC_000913/1292872‑1293172

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.