Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 280,003 IS5 (+) +4 bp pseudogene (73‑76/174 nt) insI1 → IS30 transposase;IS, phage, Tn; Transposon‑related functions; extrachromosomal; transposon related

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 273955 =NA (NA)93 (1.350) 66/298 0.1 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 280003 = 0 (0.000)noncoding (73/181 nt) IS30 repeat region
* ? NC_000913 = 275149NA (NA)60 (0.870) 54/298 0.5 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 280006 0 (0.000)noncoding (76/181 nt) IS30 repeat region

Only 100 of 142 total aligned reads displayed.

TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGC  >  NC_000913/279857‑280156
                                                                                                                                                     |                                                                                                                                                      
tGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGg                                                                                                                                                       <  1:793632‑M2/151‑2 (MQ=255)
aaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGa                                                                                                                                                       <  2:667733‑M2/5‑1 (MQ=255)
 gATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAg                                                                                                                                                        <  2:611132/149‑1 (MQ=255)
     ggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTgg                                                                                                                                                  >  1:359420‑M2/142‑151 (MQ=255)
      gggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGt                                                                                                                                                 <  2:213201‑M2/11‑1 (MQ=255)
              gCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaaca                                                                                                                                          >  1:248175‑M2/1‑136 (MQ=255)
               ccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCa                                                                                                                                        <  1:684678‑M2/20‑1 (MQ=255)
                cttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTc                                                                                                                                         >  1:642002‑M2/131‑149 (MQ=255)
                   aaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCt                                                                                                                                     <  1:565851‑M2/23‑1 (MQ=255)
                   aaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCt                                                                                                                                     <  1:703708‑M2/23‑1 (MQ=255)
                   aaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTa                                                                                                                                    <  2:448876‑M2/24‑1 (MQ=255)
                     atggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTaa                                                                                                                                   >  2:772462‑M2/126‑150 (MQ=255)
                       ggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAaac                                                                                                                                 <  2:389953‑M2/27‑1 (MQ=255)
                             cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgaga                                                                                                                          >  1:618446‑M2/1‑121 (MQ=255)
                               aaaaCAACATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatat                                                                                                                              <  2:586689‑M2/145‑27 (MQ=255)
                                  ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCg                                                                                                                        >  1:974353‑M2/113‑148 (MQ=255)
                                    tctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGaa                                                                                                                    >  1:753699‑M2/111‑150 (MQ=255)
                                    acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtt                                                                                                                   >  1:438050‑M2/1‑114 (MQ=255)
                                     ctaaataggctgagtcaaggcattaacgggagaaaaaatcggctcaaacatgaagaaatgaactgactgagtcagccgagaagaatttcgccgcttattcgcaccttcaCTAGTACTGGTAGCTGCTCAGCTAAACAACAGACCGAGaa                                                                                                                    >  2:736726‑M2/110‑149 (MQ=255)
                                      catcatACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttg                                                                                                                 <  2:50058‑M2/151‑40 (MQ=255)
                                       aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGaaa                                                                                                                   <  1:139557‑M2/41‑1 (MQ=255)
                                       aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAg                                                                                                                  <  1:646217‑M2/42‑1 (MQ=255)
                                         catACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtc                                                                                                               >  1:212033‑M2/1‑109 (MQ=255)
                                          atACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat                                                                                                             >  2:989380‑M2/1‑108 (MQ=255)
                                           tACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc                                                                                                            <  1:463776‑M2/151‑45 (MQ=255)
                                           aggctgattcaaggcatttacgggagaaaaaatcggctcaaacgtgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACt                                                                                                             <  1:245437‑M2/47‑1 (MQ=255)
                                           aggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACt                                                                                                             <  2:785880‑M2/47‑1 (MQ=255)
                                            ggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGa                                                                                                           <  2:654663‑M2/49‑1 (MQ=255)
                                             gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGaa                                                                                                          <  1:9533‑M2/50‑1 (MQ=255)
                                             cacTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg                                                                                                          >  2:114193‑M2/1‑105 (MQ=255)
                                                gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAg                                                                                                         <  2:806693‑M2/51‑1 (MQ=255)
                                                   aTCAGTAAGTTGGCAGCATCACCGAGAACGCAAATGGGTTAATTCGGCAGTCCTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgataggagatcatgtttgtcatctggagcca                                                                                                    >  2:42775‑M2/1‑99 (MQ=255)
                                                     aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCaaa                                                                                                   >  2:266219‑M2/94‑150 (MQ=255)
                                                        tAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga                                                                                                <  2:497764‑M2/150‑57 (MQ=255)
                                                        gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAacac                                                                                               >  1:154912‑M2/91‑151 (MQ=255)
                                                             tacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGaa                                                                                           >  2:356113‑M2/86‑150 (MQ=255)
                                                              ggCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt                                                                                         >  1:1023031‑M2/1‑88 (MQ=255)
                                                                 ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAgaga                                                                                      <  2:539084‑M2/70‑1 (MQ=255)
                                                                      aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAAtt                                                                                 <  2:34084‑M2/75‑1 (MQ=255)
                                                                        aaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGa                                                                               <  1:473422‑M2/77‑1 (MQ=255)
                                                                         cGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt                                                                              <  1:674258‑M2/151‑75 (MQ=255)
                                                                          gagaACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc                                                                             <  1:143648‑M2/151‑76 (MQ=255)
                                                                            cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAgg                                                                           >  1:729831‑M2/71‑151 (MQ=255)
                                                                             ggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAggg                                                                          <  1:85183‑M2/82‑1 (MQ=255)
                                                                               cacaAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatca                                                                         <  1:924703‑M2/150‑80 (MQ=255)
                                                                                acaAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac                                                                       >  2:265651‑M2/1‑70 (MQ=255)
                                                                                 caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGgtgt                                                                      <  1:614224‑M2/86‑1 (MQ=255)
                                                                                 caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGgtg                                                                       <  1:808441‑M2/85‑1 (MQ=255)
                                                                                     catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGc                                                                   >  1:360130‑M2/62‑150 (MQ=255)
                                                                                      gggCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct                                                                 >  1:471898‑M2/1‑64 (MQ=255)
                                                                                      gggCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct                                                                 <  1:530556‑M2/151‑88 (MQ=255)
                                                                                       ggCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt                                                                >  2:948737‑M2/1‑63 (MQ=255)
                                                                                        gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCAtt                                                                <  1:231905‑M2/92‑1 (MQ=255)
                                                                                             aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGa                                                          <  2:637558‑M2/98‑1 (MQ=255)
                                                                                                ggCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag                                                       >  2:184770‑M2/1‑54 (MQ=255)
                                                                                                   atgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAAt                                                    >  2:884371‑M2/48‑151 (MQ=255)
                                                                                                    gTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                                   >  1:545936‑M2/1‑50 (MQ=255)
                                                                                                     gactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCt                                                  >  2:803480‑M2/46‑151 (MQ=255)
                                                                                                      actgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTa                                                 <  2:175171‑M2/107‑1 (MQ=255)
                                                                                                        tttCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc                                                <  1:768368‑M2/150‑105 (MQ=255)
                                                                                                        tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTAc                                                >  1:226500‑M2/43‑150 (MQ=255)
                                                                                                         ttCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc                                                >  1:1031372‑M2/1‑45 (MQ=255)
                                                                                                           gtcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTAcagca                                            <  1:262800‑M2/112‑1 (MQ=255)
                                                                                                            tcagccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTAcagc                                             >  2:498821‑M2/39‑149 (MQ=255)
                                                                                                             tAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagt                                          <  1:217819‑M2/151‑111 (MQ=255)
                                                                                                              agccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCt                                         >  1:1051352‑M2/37‑151 (MQ=255)
                                                                                                              agccgagaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCt                                         <  2:572167‑M2/115‑1 (MQ=255)
                                                                                                                    gaagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttttttt                                   <  1:183716‑M2/121‑1 (MQ=255)
                                                                                                                    aCATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgcc                                   >  2:60399‑M2/1‑34 (MQ=255)
                                                                                                                     cATGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccg                                  >  1:260221‑M2/1‑33 (MQ=255)
                                                                                                                     aagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttttttt                                   >  1:392824‑M2/30‑150 (MQ=255)
                                                                                                                     aagaatttccccgcttattcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttttttt                                   >  1:494189‑M2/30‑150 (MQ=255)
                                                                                                                       tGTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc                                <  2:110274‑M2/151‑121 (MQ=255)
                                                                                                                        gTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtca                               >  2:875273‑M2/1‑30 (MQ=255)
                                                                                                                        gTCTTGCCCAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc                                <  1:555225‑M2/150‑121 (MQ=255)
                                                                                                                              cccAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccag                         >  1:912667‑M2/1‑24 (MQ=255)
                                                                                                                               ccAATATACTCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc                           <  2:1011866‑M2/148‑126 (MQ=255)
                                                                                                                                     attcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcgtc                  >  1:332924‑M2/14‑151 (MQ=255)
                                                                                                                                     attcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcgtc                  >  1:1067372‑M2/14‑151 (MQ=255)
                                                                                                                                     attcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcgtc                  <  2:945043‑M2/138‑1 (MQ=255)
                                                                                                                                     attcgcaccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcgt                   <  2:974323‑M2/137‑1 (MQ=255)
                                                                                                                                        tCAACATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatt               <  1:524400‑M2/151‑138 (MQ=255)
                                                                                                                                          caccttccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTaa             <  1:267680‑M2/143‑1 (MQ=255)
                                                                                                                                          aaCATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt             <  2:428403‑M2/151‑140 (MQ=255)
                                                                                                                                            cATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttct           <  1:319630‑M2/151‑142 (MQ=255)
                                                                                                                                            cATGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttct           <  1:175582‑M2/151‑142 (MQ=255)
                                                                                                                                             aTGAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt          <  1:72244‑M2/151‑143 (MQ=255)
                                                                                                                                               tccCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCg         <  1:847110‑M2/147‑1 (MQ=255)
                                                                                                                                                aaCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc       >  2:884870‑M2/1‑6 (MQ=255)
                                                                                                                                                 cCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGttt      <  2:519328‑M2/150‑1 (MQ=255)
                                                                                                                                                 aCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcc      <  1:389613‑M2/151‑147 (MQ=255)
                                                                                                                                                 aCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcc      <  1:1010420‑M2/151‑147 (MQ=255)
                                                                                                                                                  cTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtccc     <  1:42147‑M2/151‑148 (MQ=255)
                                                                                                                                                   tAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTc     >  2:476391/1‑150 (MQ=255)
                                                                                                                                                    aGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg    >  1:221267‑M2/1‑2 (MQ=255)
                                                                                                                                                    aGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg    >  2:240230‑M2/1‑2 (MQ=255)
                                                                                                                                                    aGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg    >  1:851678‑M2/1‑2 (MQ=255)
                                                                                                                                                    aGggaaggagcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc   <  2:86015‑M2/151‑150 (MQ=255)
                                                                                                                                                     gggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc   <  2:900181‑M2/150‑150 (MQ=255)
                                                                                                                                                     gATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGc  >  2:210236/1‑151 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGC  >  NC_000913/279857‑280156

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.