Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 580,116 IS5 (–) +4 bp intergenic (+30/+132) ybcW → / ← ylcI DLP12 prophage; uncharacterized protein/DUF3950 family protein, DLP12 prophage

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 275149NA (NA)81 (1.120) 69/296 0.1 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 580116 = 0 (0.000)intergenic (+30/+135) ybcW/ylcI DLP12 prophage; uncharacterized protein/DUF3950 family protein, DLP12 prophage
* ? NC_000913 574591 =NA (NA)82 (1.130) 54/298 0.6 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 580119 0 (0.000)intergenic (+33/+132) ybcW/ylcI DLP12 prophage; uncharacterized protein/DUF3950 family protein, DLP12 prophage

Only 100 of 155 total aligned reads displayed.

CCTGATGTTGTAATTGCATGTATAGAACATAAGGTGTCTCTGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATCGTCCTGTTCGGAGGGAAGAACGCGGGATGTTCATTCTTCATCA  >  NC_000913/579967‑580263
                                                                                                                                                     |                                                                                                                                                   
  tGATGTTGTAATTGCATGTATAGAACATAAGGTGTCTCTGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTa                                                                                                                                                   >  2:829477/1‑150 (MQ=255)
    aTGTTGTAATTGCATGTATAGAACATAAGGTGTCTCTGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAgg                                                                                                                                                >  1:109459‑M2/1‑149 (MQ=255)
           aaTTGCATGTATAGAACATAAGGTGTCTCTGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgc                                                                                                                                         >  2:616397‑M2/1‑142 (MQ=255)
                 aTGTATAGAACATAAGGTGTCTCTGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataa                                                                                                                                   >  1:321982‑M2/1‑136 (MQ=255)
                   gTATAGAACATAAGGTGTCTCTGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagc                                                                                                                                 >  1:690828‑M2/1‑134 (MQ=255)
                       aGAACATAAGGTGTCTCTGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcgggg                                                                                                                             >  1:667419‑M2/1‑130 (MQ=255)
                           ctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTc                                                                                                                         >  1:443108‑M2/123‑151 (MQ=255)
                            tgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTct                                                                                                                        >  2:414111‑M2/122‑151 (MQ=255)
                             gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTctg                                                                                                                       <  2:285698‑M2/31‑1 (MQ=255)
                               cggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTctgtc                                                                                                                     >  2:400868‑M2/119‑151 (MQ=255)
                               aGGTGTCTCTGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattctt                                                                                                                     >  2:819013‑M2/1‑122 (MQ=255)
                                 gcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTctgtcac                                                                                                                   <  1:560277‑M2/35‑1 (MQ=255)
                                  tgtCTCTGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAgga                                                                                                                                               >  1:173531‑M2/1‑119 (MQ=255)
                                  tgtCTCTGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAgga                                                                                                                                               <  2:173552‑M2/122‑4 (MQ=255)
                                  cgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTctgtcact                                                                                                                  <  1:293009‑M2/36‑1 (MQ=255)
                                   gtCTCTGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctc                                                                                                                  >  2:1035208‑M2/1‑118 (MQ=255)
                                   gtCTCTGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctc                                                                                                                  >  1:569276‑M2/1‑118 (MQ=255)
                                    cttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTctgtcactgt                                                                                                                >  2:499157‑M2/114‑151 (MQ=255)
                                      tactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTctgtcactgt                                                                                                                <  1:990366‑M2/38‑1 (MQ=255)
                                      tactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTctgtcactgt                                                                                                                <  2:564645‑M2/38‑1 (MQ=255)
                                      tactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTctgtcactgt                                                                                                                <  2:52113‑M2/38‑1 (MQ=255)
                                       ctGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctctgc                                                                                                               >  1:697701‑M2/1‑114 (MQ=255)
                                           ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGaa                                                                                                          >  2:310829‑M2/107‑150 (MQ=255)
                                           aaGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactc                                                                                                         >  1:757931‑M2/1‑110 (MQ=255)
                                             gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAg                                                                                                        <  1:1026387‑M2/46‑1 (MQ=255)
                                                 tcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGt                                                                                                    <  1:780101‑M2/50‑1 (MQ=255)
                                                  cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTa                                                                                                   >  2:1136384‑M2/100‑150 (MQ=255)
                                                  cAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt                                                                                                  >  1:338735‑M2/1‑103 (MQ=255)
                                                   actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTaaa                                                                                                 <  2:756518‑M2/53‑1 (MQ=255)
                                                     ggCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttca                                                                                               >  2:51732‑M2/1‑100 (MQ=255)
                                                      gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTaaaa                                                                                                <  2:91627‑M2/54‑1 (MQ=255)
                                                      gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagcgacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACt                                                                                              >  1:109930‑M2/96‑151 (MQ=255)
                                                      gCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat                                                                                              >  2:738723‑M2/1‑99 (MQ=255)
                                                       tcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTg                                                                                             >  2:140383‑M2/95‑151 (MQ=255)
                                                        aaTTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt                                                                                            >  1:584962‑M2/1‑97 (MQ=255)
                                                         ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCa                                                                                           <  2:1088143‑M2/59‑1 (MQ=255)
                                                         ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCa                                                                                           <  2:652145‑M2/59‑1 (MQ=255)
                                                            gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACt                                                                                        <  2:727165‑M2/62‑1 (MQ=255)
                                                            gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACt                                                                                        <  1:797163‑M2/62‑1 (MQ=255)
                                                               ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCaa                                                                                     <  2:883156‑M2/65‑1 (MQ=255)
                                                               ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCa                                                                                      >  2:701081‑M2/87‑150 (MQ=255)
                                                                cAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                                    >  1:470204‑M2/1‑89 (MQ=255)
                                                                  gCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                  >  2:825496‑M2/1‑87 (MQ=255)
                                                                  aagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTa                                                                                  <  1:1072722‑M2/68‑1 (MQ=255)
                                                                   agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTAc                                                                                 <  1:1049297‑M2/69‑1 (MQ=255)
                                                                      tgatgactcatgatgaaccctgttatatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTg                                                                               >  2:334384‑M2/80‑150 (MQ=255)
                                                                      tGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggcgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc                                                                              <  2:949685‑M2/151‑69 (MQ=255)
                                                                       ggTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc                                                                              >  1:91878‑M2/1‑82 (MQ=255)
                                                                       gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGc                                                                              <  2:1039549‑M2/72‑1 (MQ=255)
                                                                       gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCa                                                                             <  2:1082751‑M2/73‑1 (MQ=255)
                                                                         tgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAAt                                                                           >  2:416057‑M2/77‑151 (MQ=255)
                                                                          gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATg                                                                          <  2:15497‑M2/76‑1 (MQ=255)
                                                                              catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCt                                                                      <  1:844715‑M2/80‑1 (MQ=255)
                                                                               atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTc                                                                     >  1:854999‑M2/71‑151 (MQ=255)
                                                                                cGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc                                                                    <  1:1025705‑M2/151‑79 (MQ=255)
                                                                                     aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAAtt                                                               >  2:894096‑M2/65‑151 (MQ=255)
                                                                                         ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAg                                                            >  1:749070‑M2/61‑150 (MQ=255)
                                                                                         ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGt                                                           >  1:819044‑M2/61‑151 (MQ=255)
                                                                                                gATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg                                                    >  2:92244‑M2/1‑57 (MQ=255)
                                                                                                gATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg                                                    >  1:364978‑M2/1‑57 (MQ=255)
                                                                                                gATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg                                                    >  2:191707‑M2/1‑57 (MQ=255)
                                                                                                atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAAt                                                       <  1:91238‑M2/95‑1 (MQ=255)
                                                                                                 tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTAc                                                   >  1:498928‑M2/53‑151 (MQ=255)
                                                                                                  ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAGGTGAATTTACa                                                  <  1:113388‑M2/100‑1 (MQ=255)
                                                                                                  ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTAc                                                   <  1:36011‑M2/99‑1 (MQ=255)
                                                                                                   tattCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat                                                 <  1:576057‑M2/151‑98 (MQ=255)
                                                                                                      tCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca                                               >  1:754557‑M2/1‑51 (MQ=255)
                                                                                                      ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAat                                                <  1:549699‑M2/102‑1 (MQ=255)
                                                                                                        agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATc                                             <  1:456203‑M2/105‑1 (MQ=255)
                                                                                                        agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATCg                                            <  1:414083‑M2/106‑1 (MQ=255)
                                                                                                        agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATCg                                            <  1:290965‑M2/106‑1 (MQ=255)
                                                                                                              caaacatgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATCGTCCTGt                                      >  1:817974‑M2/40‑151 (MQ=255)
                                                                                                                  catgatctcatatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATCGTCCTGTTCgg                                  >  2:989876‑M2/36‑151 (MQ=255)
                                                                                                                      gATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgttt                              <  1:876337‑M2/151‑117 (MQ=255)
                                                                                                                      gATCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtt                               >  1:958301‑M2/1‑35 (MQ=255)
                                                                                                                        tCACCATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttct                            <  1:923175‑M2/151‑119 (MQ=255)
                                                                                                                          catatcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATCGTCCTGTTCGGAgg                               <  2:773964‑M2/119‑1 (MQ=255)
                                                                                                                            cATAACTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgc                        <  2:658111‑M2/151‑123 (MQ=255)
                                                                                                                             atcagggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATCGTCCTGTTCGGAGGGAAGAAc                        <  2:301768‑M2/126‑1 (MQ=255)
                                                                                                                                aCTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatt                    >  1:113082‑M2/1‑25 (MQ=255)
                                                                                                                                 gggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATCGTCCTGTTCGGAGGGAAGAACGCggg                   >  1:136946‑M2/21‑151 (MQ=255)
                                                                                                                                 gggacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATGTACAATATCGTCCTGTTCGGAGGGAAGAACGCgg                    <  1:418065‑M2/130‑1 (MQ=255)
                                                                                                                                 cTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt                   <  1:911111‑M2/151‑128 (MQ=255)
                                                                                                                                 cTGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt                   <  2:238373‑M2/151‑128 (MQ=255)
                                                                                                                                  tGCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt                   <  1:778660‑M2/150‑128 (MQ=255)
                                                                                                                                   gacttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATCGTCCTGTTCGGAGGGAAGAACGCGGGAt                 <  1:928330‑M2/133‑1 (MQ=255)
                                                                                                                                   gCTAATCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa                 >  2:112278‑M2/1‑22 (MQ=255)
                                                                                                                                    acttgttcgcaccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATCGTCCTGTTCGGAGGGAAGAACGCGGGATg                >  1:748930‑M2/18‑151 (MQ=255)
                                                                                                                                      attcctcttaaggtgttaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggc              >  1:983695‑M2/16‑19 (MQ=255)
                                                                                                                                      aaTCATTCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggc              >  1:531447‑M2/1‑19 (MQ=255)
                                                                                                                                         cctcttaaggtgttaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtt           >  2:651442‑M2/13‑16 (MQ=255)
                                                                                                                                          ctcttaaggtgttaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtt           <  1:949641‑M2/139‑136 (MQ=255)
                                                                                                                                            tCAAACTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttat         >  1:24369‑M2/1‑13 (MQ=255)
                                                                                                                                             caccttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATCGTCCTGTTCGGAGGGAAGAACGCGGGATGTTCAttctt       <  1:480498‑M2/143‑1 (MQ=255)
                                                                                                                                              accttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATCGTCCTGTTCGGAGGGAAGAACGCGGGATGTTCAttcttc      >  2:599326‑M2/8‑151 (MQ=255)
                                                                                                                                              aaaCTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc      >  2:51621‑M2/1‑11 (MQ=255)
                                                                                                                                                cttccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATCGTCCTGTTCGGAGGGAAGAACGCGGGATGTTCATTCTtcat    >  1:963419‑M2/6‑151 (MQ=255)
                                                                                                                                                aggtgttaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccaa    >  2:608905‑M2/6‑9 (MQ=255)
                                                                                                                                                  tccTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATCGTCCTGTTCGGAGGGAAGAACGCGGGATGTTCATTCTtcatc   <  2:963476‑M2/147‑1 (MQ=255)
                                                                                                                                                     ttAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATCGTCCTGTTCGGAGGGAAGAACGCGGGATGTTCATTCTtcatca  <  2:481353/148‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CCTGATGTTGTAATTGCATGTATAGAACATAAGGTGTCTCTGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGATCACCATAACTGCTAATCATTCAAACTACTTAACCTGTGACAGAGCCAACACGCAGTCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTGAATTTACAATATCGTCCTGTTCGGAGGGAAGAACGCGGGATGTTCATTCTTCATCA  >  NC_000913/579967‑580263

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.