| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,398,054 | Δ7 bp | coding (643‑649/1848 nt) | mutL → | methyl‑directed mismatch repair protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4398054 | 4398060 | 7 | 48 [0] | [0] 48 | mutL | methyl‑directed mismatch repair protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4398053 | 0 (0.000) | 46 (0.860) | 44/292 | 0.4 | 100% | coding (642/1848 nt) | mutL | methyl‑directed mismatch repair protein |
| ? | NC_000913 | 4398061 = | 0 (0.000) | coding (650/1848 nt) | mutL | methyl‑directed mismatch repair protein | |||||
AAAACCGAATTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCG > NC_000913/4397904‑4398202 | aaaaCCGAATTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGg > 2:462917‑M1/1‑150 (MQ=255) cGAATTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcacc > 2:640739‑M1/1‑145 (MQ=255) ccAAATTGATGAGTTCATCCGCCGCATTGCGCTGGCGCGTTTCGACGCCACGATCAAACTGTCGCATAACGGTAAAATTGTGCGACAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttg > 1:434798‑M1/1‑136 (MQ=255) caTTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaac < 2:352765‑M1/151‑19 (MQ=255) gatgaGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGAGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagc > 2:249476‑M1/1‑129 (MQ=255) gagaTCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgc < 2:458872‑M1/150‑25 (MQ=255) gaTCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctgg < 1:331825‑M1/151‑28 (MQ=255) atcCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgat > 2:353926‑M1/1‑120 (MQ=255) ccgccgCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattg > 1:320382‑M1/1‑118 (MQ=255) ccgccgCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgatt < 1:635369‑M1/150‑33 (MQ=255) cgccgcATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattg > 2:89214‑M1/1‑117 (MQ=255) ccgcATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaa > 1:643024‑M1/1‑115 (MQ=255) cgcATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatg > 2:104182‑M1/1‑114 (MQ=255) aTTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggc > 2:518397‑M1/1‑111 (MQ=255) tGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggc > 1:587937‑M1/1‑104 (MQ=255) cGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgc > 1:186060‑M1/1‑94 (MQ=255) cGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctac > 2:352080‑M1/1‑91 (MQ=255) cGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctac < 1:658140‑M1/151‑61 (MQ=255) cACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcg < 1:89191‑M1/151‑64 (MQ=255) cGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggc > 1:547840‑M1/1‑86 (MQ=255) cTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggc > 2:570368‑M1/1‑78 (MQ=255) cGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccga < 2:821384‑M1/150‑77 (MQ=255) gCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatc > 2:319174‑M1/1‑73 (MQ=255) aaCGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaa > 1:702756‑M1/1‑69 (MQ=255) aaCGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaa > 1:568395‑M1/1‑69 (MQ=255) cGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGGGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaattc < 1:786583‑M1/151‑85 (MQ=255) gCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgccc < 1:551659‑M1/150‑96 (MQ=255) gCGTCAGTACCGCGCAGTGCCGGAAGGCAGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgccc < 2:737482‑M1/150‑96 (MQ=255) cAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcac < 2:527561‑M1/150‑100 (MQ=255) ccGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgcacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcag < 1:138364‑M1/151‑106 (MQ=255) ccGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggc > 1:477488‑M1/1‑46 (MQ=255) cgcgCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggc > 1:134641‑M1/1‑45 (MQ=255) cgcgCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcctttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcaga < 1:693617‑M1/151‑107 (MQ=255) gcAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaat < 1:322751‑M1/151‑110 (MQ=255) cGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtat > 2:522475‑M1/1‑35 (MQ=255) aaGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgc > 2:136087‑M1/1‑32 (MQ=255) aGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgct > 2:500011‑M1/1‑31 (MQ=255) cGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacg > 1:119886‑M1/1‑28 (MQ=255) gggCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgt > 1:582878‑M1/1‑27 (MQ=255) cAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgtga > 1:809826‑M1/1‑24 (MQ=255) aaaaGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgtgaacg < 2:320405‑M1/151‑130 (MQ=255) aaGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgttaacggt < 1:727840‑M1/151‑132 (MQ=255) aGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgtgaacggtc < 1:605381‑M1/151‑133 (MQ=255) tAGGCGCGgctccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgtgaacggtcgcatgatgcgc > 2:151188‑M1/1‑8 (MQ=255) aGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgtgaacggtcgcatgatgcgcg < 2:643066‑M1/151‑145 (MQ=255) gcgcGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgtgaacggtcgcatgatgcgcgat < 2:507570‑M1/151‑147 (MQ=255) cggcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgtgaacggtcgcatgatgcgcgatcgc > 1:212708‑M1/1‑2 (MQ=255) cggcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgtgaacggtcgcatgatgcgcgatcgc > 2:571659‑M1/1‑2 (MQ=255) | AAAACCGAATTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCG > NC_000913/4397904‑4398202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |