Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	902,979	C→T	V4I (GTT→ATT)	artI ←	arginine transporter subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	902,979	0	C	T	100.0%	203.2 / NA	53	V4I (GTT→ATT)	artI	arginine transporter subunit
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (22/31);  total (22/31)

TGTGCCAGGTCGACGTCAAAACCAACGATCTGGTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAACTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGACCATTTTCCATATACACCACTCGGCTGGCGGTTTTAC  >  NC_000913/902834‑903121                                                                                                                                                  |                                                                                                                                               tgtgCCAGGTCGACGTCAAAACCAACGATCTGGTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAAtttt                                                                                                                                             <  1:550300/149‑1 (MQ=255)  gtgCCAGGTCGACGTCAAAACCAACGATCTGGTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATtttttt                                                                                                                                          <  2:398187/151‑1 (MQ=255)      cAGGTCGACGTCAAAACCAACGATCTGGTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCAtt                                                                                                                                      >  2:290561/1‑151 (MQ=255)       aGGTCGACGTCAAAACCAACGATCTGGTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCAttg                                                                                                                                     <  2:385546/151‑1 (MQ=255)            gACGTCAAAACCAACGATCTGGTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTgttgtt                                                                                                                                >  2:367821/1‑151 (MQ=255)             aCGTCAAAACCAACGATCTGGTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTa                                                                                                                               <  1:277865/151‑1 (MQ=255)              cGTCAAAACCAACGATCTGGTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTAt                                                                                                                              >  1:101113/1‑151 (MQ=255)               gTCAAAACCAACGATCTGGTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTCTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATc                                                                                                                             >  2:186072/1‑151 (MQ=255)                     aCCAACGATCTGGTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAAt                                                                                                                       <  1:626027/151‑1 (MQ=255)                      ccAACGATCTGGTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATc                                                                                                                      <  2:238794/151‑1 (MQ=255)                           gATCTGGTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAg                                                                                                                  >  1:144456/1‑150 (MQ=255)                           gATCTGGTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGt                                                                                                                 >  2:261329/1‑151 (MQ=255)                                ggTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGt                                                                                                                 <  2:124457/146‑1 (MQ=255)                                ggTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTgagag                                                                                                            <  2:17340/151‑1 (MQ=255)                                ggTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTAGCCCGAATCTTAGTg                                                                                                                <  2:166538/147‑1 (MQ=255)                                         cATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGttt                                                                                                   <  2:506950/151‑1 (MQ=255)                                         cATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGttt                                                                                                   <  2:748140/151‑1 (MQ=255)                                         cATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGttt                                                                                                   >  2:779585/1‑151 (MQ=255)                                              aTCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTaaa                                                                                              <  1:66168/151‑1 (MQ=255)                                               tCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAAt                                                                                             >  2:25604/1‑151 (MQ=255)                                                       aaCGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGt                                                                                     <  1:427013/151‑1 (MQ=255)                                                       aaCGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGt                                                                                     <  1:28027/151‑1 (MQ=255)                                                        accgaggaTAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCg                                                                                       >  1:506637/4‑148 (MQ=255)                                                         cGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGttt                                                                                   <  2:20626/151‑1 (MQ=255)                                                         cGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGttt                                                                                   <  1:152365/151‑1 (MQ=255)                                                          ggaggaTAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTg                                                                                  <  2:798400/151‑1 (MQ=255)                                                              gaTAGGAGGCTTCCGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCgg                                                                               <  1:26283/150‑1 (MQ=255)                                                                  ggaggCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCgg                                                                          <  1:539362/151‑1 (MQ=255)                                                                      gCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTaa                                                                       >  2:459832/1‑150 (MQ=255)                                                                            gTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCt                                                                <  2:80301/151‑1 (MQ=255)                                                                                     cGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGcc                                                       <  1:115532/151‑1 (MQ=255)                                                                                             ttCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCt                                                <  1:450361/150‑1 (MQ=255)                                                                                              tCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTa                                               <  1:270752/150‑1 (MQ=255)                                                                                              tCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTAc                                              >  1:47572/1‑151 (MQ=255)                                                                                                      tgtgGCGGAAAGACTAAAACCTGCAATTAACGCGGGAATCAGACTTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAACAGCCTGCGTGGCCTTGTTCTTCGATATTAc                                      >  1:88495/1‑151 (MQ=255)                                                                                                      tgtgGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGAc                                      >  2:199804/1‑151 (MQ=255)                                                                                                      tgtgGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGATTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATg                                        >  2:363050/1‑149 (MQ=255)                                                                                                       gtgGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGAcc                                     >  2:305134/1‑151 (MQ=255)                                                                                                        tgGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGAcc                                     >  2:64945/1‑150 (MQ=255)                                                                                                         ggCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATTTGACCAt                                   >  1:285606/1‑151 (MQ=255)                                                                                                            ggAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGACCAtttt                                <  2:829703/151‑1 (MQ=255)                                                                                                              aaaGACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGACCATTTTcc                              >  2:559423/1‑151 (MQ=255)                                                                                                                 gACTAAAACCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGACCATTTTCCata                           <  2:48350/151‑1 (MQ=255)                                                                                                                     aaaaCCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGACCATTTTCCATATac                        <  2:101136/150‑1 (MQ=255)                                                                                                                     aaaaCCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGACCATTTTCCATATac                        >  1:705723/1‑150 (MQ=255)                                                                                                                      aaaCCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGACCATTTTCCATATacac                      >  1:487140/1‑151 (MQ=255)                                                                                                                      aaaCCTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGACCATTTTCCATATacac                      <  1:807571/151‑1 (MQ=255)                                                                                                                       aaCCTGCCATTAACGCGGAAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGTAGCTCGCGTCGCCTTGTTCTACGATATGACCATTTTCCATATacac                      >  1:782662/1‑150 (MQ=255)                                                                                                                         ccTGCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGACCATTTTCCATATAcaccac                   >  2:358758/1‑151 (MQ=255)                                                                                                                            gCAATTAACGCGGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGACCATTTTCCATATACACCACTCg                <  2:475796/151‑1 (MQ=255)                                                                                                                                     gcgGCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGACCATTTTCCATATACACCACTCGGCTGGCGGt       <  2:47594/151‑1 (MQ=255)                                                                                                                                       ggCAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGACCATTTTCCATATACACCACTCGGCTGGCGGttt     <  1:283758/151‑1 (MQ=255)                                                                                                                                         cAATCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGACCATTTTCCATATACACCACTCGGCTGGCGGTTTTa   <  1:686726/151‑1 (MQ=255)                                                                                                                                          aaTCAGAATTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGACCATTTTCCATATACACCACTCGGCTGGCGGTTTTAc  <  2:355535/151‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                               TGTGCCAGGTCGACGTCAAAACCAACGATCTGGTTGTTTGCATCAATCGATTCAAACGGAGGATAGGAGGCTTCGGTAGCAAAACGAATGGTTTCGGCAGCTGTGGCGGAAAGACTAAAACCTGCAATTAACGCGGCAATCAGAACTTTTTTCATTGTTGTTATCCCGAATCTTAGTGAGAGAGATAGTTTTTAAATGCTTCGGTTTGCGGCTCGGTAAAGCAGCTCGCGTCGCCTTGTTCTACGATATGACCATTTTCCATATACACCACTCGGCTGGCGGTTTTAC  >  NC_000913/902834‑903121

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑