Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,042,663	A→G	R516R (CGT→CGC)	etk ←	tyrosine‑protein kinase, role in O‑antigen capsule formation

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,042,663	0	A	G	100.0%	213.9 / NA	61	R516R (CGT→CGC)	etk	tyrosine‑protein kinase, role in O‑antigen capsule formation
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (34/27);  total (34/27)

TAAATAACACTTTTTGATCGGACTGGGCGATCACCGCTGCCAGAGTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCACGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGTGCGTTTATCCAGCCACTCGGACATTGGGATAGTGGC  >  NC_000913/1042515‑1042809                                                                                                                                                     |                                                                                                                                                   taaataaCACTTTTTGATCGGACTGGGCGATCACCGCTGCCAGAGTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGcgcgcg                                                                                                                                                  >  2:172736/1‑151 (MQ=255)  aaataaCACTTTTTGATCGGACTGGGCGATCACCGCTGCCAGAGTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGt                                                                                                                                                 <  1:358820/151‑1 (MQ=255)     taaCACTTTTTGATCGGACTGGGCGATCACCGCTGCCAGAGTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACg                                                                                                                                              >  1:786627/1‑151 (MQ=255)         acTTTTTGATCGGACTGGGCGATCACCGCTGCCAGAGTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCtt                                                                                                                                          >  2:573170/1‑151 (MQ=255)         acTTTTTGATCGGACTGGGCGATCACCGCTGCCAGAGTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCtt                                                                                                                                          >  2:342852/1‑151 (MQ=255)            ttttGATCGGACTGGGCGATCACCGCTGCCAGAGTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTc                                                                                                                                         <  2:74770/149‑1 (MQ=255)                    ggACTGGGCGATCACCGCTGCCAGAGTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGaa                                                                                                                               <  2:279506/151‑1 (MQ=255)                      aCTGGGCGATCACCGCTGCCAGAGTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTATCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATc                                                                                                                             >  1:671591/1‑151 (MQ=255)                        tGGGCGATCACCGCTGCCAGAGTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATccg                                                                                                                           >  2:292486/1‑151 (MQ=255)                           gCGATCACCGCTGCCAGAGTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATccgccg                                                                                                                        >  2:706959/1‑151 (MQ=255)                            cGATCACCGCTGCCAGAGTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCgg                                                                                                                       >  2:795860/1‑151 (MQ=255)                                  ccGCTGCCAGAGTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATc                                                                                                                 >  1:713990/1‑151 (MQ=255)                                  ccGCTGCCAGAGTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATc                                                                                                                 >  2:550573/1‑151 (MQ=255)                                        ccAGAGTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCg                                                                                                            <  2:87214/150‑1 (MQ=255)                                            agTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAgg                                                                                                       <  2:855956/151‑1 (MQ=255)                                             gTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCGCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTCCGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAgg                                                                                                       <  1:395879/150‑1 (MQ=255)                                                gAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAg                                                                                                    <  2:43264/150‑1 (MQ=255)                                                    tGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGa                                                                                                >  2:190253/1‑150 (MQ=255)                                                     gACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGat                                                                                               >  1:725963/1‑150 (MQ=255)                                                         aaCGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGGATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATAtttt                                                                                          <  1:583079/151‑1 (MQ=255)                                                           cGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATAttttt                                                                                         >  1:173818/1‑150 (MQ=255)                                                           cGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTa                                                                                        <  1:40213/151‑1 (MQ=255)                                                              tttACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGt                                                                                      >  1:66857/1‑150 (MQ=255)                                                                tACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTAc                                                                                    <  1:647849/150‑1 (MQ=255)                                                                   cACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATg                                                                                >  2:681796/1‑151 (MQ=255)                                                                   cACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATg                                                                                <  1:18346/151‑1 (MQ=255)                                                                      tGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGgcg                                                                             >  1:168363/1‑151 (MQ=255)                                                                       gTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTAGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGgcgc                                                                            >  2:808837/1‑151 (MQ=255)                                                                           ggCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCgctg                                                                          <  2:249326/149‑1 (MQ=255)                                                                             cGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGa                                                                      <  1:491944/151‑1 (MQ=255)                                                                                    ccGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGaaa                                                               <  1:14407/151‑1 (MQ=255)                                                                                    ccGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGaaa                                                               <  2:640455/151‑1 (MQ=255)                                                                                        tGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAaaata                                                            >  2:26134/1‑150 (MQ=255)                                                                                        tGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAaaata                                                            >  1:589786/1‑150 (MQ=255)                                                                                         gATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAaaataa                                                           >  1:794356/1‑150 (MQ=255)                                                                                             aTTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAAtttt                                                      <  2:285035/151‑1 (MQ=255)                                                                                                aGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCt                                                   <  1:319441/151‑1 (MQ=255)                                                                                                aGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTAGCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCt                                                   <  2:671633/151‑1 (MQ=255)                                                                                                 gAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCtt                                                  >  2:839437/1‑151 (MQ=255)                                                                                                 gAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCtt                                                  >  2:171614/1‑151 (MQ=255)                                                                                                  aaTGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCtt                                                  >  1:550209/1‑150 (MQ=255)                                                                                                      ttATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGc                                              >  2:854181/1‑150 (MQ=255)                                                                                                      ttATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGc                                              <  1:801211/150‑1 (MQ=255)                                                                                                        aTTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGa                                           <  1:244351/151‑1 (MQ=255)                                                                                                          tctcCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACg                                         >  1:271732/1‑151 (MQ=255)                                                                                                             ccGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACggg                                       <  1:99812/150‑1 (MQ=255)                                                                                                             ccGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACgg                                        <  1:731003/149‑1 (MQ=255)                                                                                                             ccGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGt                                      <  2:271541/151‑1 (MQ=255)                                                                                                             ccGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGt                                      >  2:628788/1‑151 (MQ=255)                                                                                                               gTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGTGc                                    >  2:471679/1‑151 (MQ=255)                                                                                                                   ccATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGTGCGttt                                >  2:589093/1‑151 (MQ=255)                                                                                                                   ccATCATAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGTGCGtt                                 <  1:173287/150‑1 (MQ=255)                                                                                                                     atcatAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGTGCGTTTAt                              >  1:71531/1‑151 (MQ=255)                                                                                                                      tcatAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGTGCGTTTATc                             >  2:362611/1‑151 (MQ=255)                                                                                                                       catAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGTGCGTTTATcc                            <  2:446646/151‑1 (MQ=255)                                                                                                                       catAGCGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGTGCGTTTATcc                            >  1:405300/1‑151 (MQ=255)                                                                                                                            cGAAATGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGTGCGTTTATCCAGCCa                       <  1:553135/151‑1 (MQ=255)                                                                                                                               aaTGCAGACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGTGCGTTTATCCAGCCACTc                    >  1:192037/1‑151 (MQ=255)                                                                                                                                     gACTGGTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGTGCGTTTATCCAGCCACTCGGACAt              <  2:533771/151‑1 (MQ=255)                                                                                                                                          gTTCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGTGCGTTTATCCAGCCACTCGGACATTggg          >  2:282430/1‑150 (MQ=255)                                                                                                                                           ttCGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGTGCGTTTATCCAGCCACTCGGACATTGGGAt        >  1:195355/1‑151 (MQ=255)                                                                                                                                             cGTAGCGCGCGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGTGCGTTTATCCAGCCACTCGGACATTGGGAt        >  2:331860/1‑149 (MQ=255)                                                                                                                                                 gcgcgcGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGTGCGTTTATCCAGCCACTCGGACATTGGGATAGTGGc  <  1:287158/151‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   TAAATAACACTTTTTGATCGGACTGGGCGATCACCGCTGCCAGAGTTGAACTGACAAACGTTTTACCACTGTCTGGCGTCGCACCGGTGATCATTAGAATGTTATTCTCCGTCTCCATCATAGCGAAATGCAGACTGGTTCGTAGCGCACGTACGGCTTCCACAGCAGAATCCGCCGGGTTATCCACCGCCAGGAAGGGGATATTTTTAGTACGATGGCGCTGCTGATTAGAAAATAAATTTTTCTTACGCAGACGGGTGCGTTTATCCAGCCACTCGGACATTGGGATAGTGGC  >  NC_000913/1042515‑1042809

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑