Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 2,265,230 | A→G | G22G (GGT→GGC) | yeiW ← | UPF0153 cysteine cluster protein |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,265,230 | 0 | A | G | 97.4% | 110.1 / ‑6.7 | 40 | G22G (GGT→GGC) | yeiW | UPF0153 cysteine cluster protein |
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (16/22); total (18/22) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.36e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.17e-01 |
CTGCTGACGCGAGTTACCGCACATTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGA > NC_000913/2265086‑2265372 | ctgctgACGCGAGTTACCGCACATTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCggg > 2:38295/1‑150 (MQ=255) gctgACGCGAGTTACCGCACATTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCggg > 2:418407/1‑148 (MQ=255) aCGCGAGTTACCGCACATTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAggg < 2:44212/151‑1 (MQ=255) aGTTACCGCACATTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTTCCATCTGGCATGCCGGGGATAGGGCTgg > 2:197071/1‑150 (MQ=255) caTTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCCTCTGGCATGCCGGGGATAGGGGTGGGAATTGAAggg > 1:341116/1‑151 (MQ=255) tttCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCCTGCCGTCTTGCTTACCGGGAAATAGGCTGGGAATTGAAggg > 1:361945/1‑149 (MQ=255) ggCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAacac < 2:201684/151‑1 (MQ=255) tGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCCTCTGGCATGCCGGGGATAGGGGTGGGAATTGAAGGGGCAGTGCAACACGccc > 1:620859/1‑151 (MQ=255) tGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATTTTGCATGCCGGGGATAGGGGTGGGAATTGAAGGGGCAGTGCAACACGccc > 1:337965/1‑151 (MQ=255) aaGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGc < 2:344354/151‑1 (MQ=255) aGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGGATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGcccc > 2:225135/1‑148 (MQ=255) aGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCa < 2:1812/151‑1 (MQ=255) gCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAAccc < 2:543743/150‑1 (MQ=255) gCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCg < 2:473214/151‑1 (MQ=255) aGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACg < 2:699866/151‑1 (MQ=255) cTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTTCCATCTGGCATGCCGGGGATAGGGGTGGGAATTTGAGGGGGAGTGCAACACGCCCCCCAACCCGGGCgg > 1:427663/1‑149 (MQ=255) ttCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCa < 1:526090/149‑1 (MQ=255) cAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCCTGCCATCTTGCCTGCCCGGGATAGGGCCGGGAATTTAAGGGGCCGTGCAACACGCCCCGCCAACCGGACCGCATTcc > 2:15189/1‑145 (MQ=255) cGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTTGCATTCCGGGAATAGGGCTGGGAATTTAAGGGGCAGGGCAACACGCCCCGCCACCCGGGCGGCCTTCCATAAgttgtt > 1:203547/1‑149 (MQ=255) ggTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCtt < 1:457339/151‑1 (MQ=255) ggTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCtt < 1:300120/151‑1 (MQ=255) ggTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCtt < 2:306002/151‑1 (MQ=255) gAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCtt > 2:471048/1‑148 (MQ=255) aTTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCCTCTGGCATGCCGGGGATAGGGCTGGGAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAgggt > 1:105849/1‑148 (MQ=255) cGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGGAATTGAAGGGGCAGTGCAACACGCCCCGCAAACCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCgg > 2:430929/1‑150 (MQ=255) gTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGAt < 2:729100/151‑1 (MQ=255) tGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGAtt < 1:516758/150‑1 (MQ=255) tcatcaAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGGCGGGAATAGGGCTGGGAATTGAAGGGGCAGGGCAACACGCCCCGCCACCCGGACGGCATTCCATACGGTGTTCTCTTAAGGGTAACCACCGGGTtga > 2:9741/1‑146 (MQ=255) atcaAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAgcgc < 1:272034/151‑1 (MQ=255) tcaAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGGTAACCACCGGATTGATGAgcgc > 2:475847/1‑150 (MQ=255) gAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTa < 1:330026/151‑1 (MQ=255) gAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTa < 2:509724/151‑1 (MQ=255) ggCGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCAc < 2:284202/150‑1 (MQ=255) cGGGCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAg < 1:267760/151‑1 (MQ=255) gggCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGc > 2:289090/1‑151 (MQ=255) ggCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCa < 2:104722/151‑1 (MQ=255) gCTTGCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCaa < 1:115960/151‑1 (MQ=255) gCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGt < 1:269902/151‑1 (MQ=255) gCCATCTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGt < 1:225102/151‑1 (MQ=255) cTGGCATGCCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGa > 1:569169/1‑150 (MQ=255) | CTGCTGACGCGAGTTACCGCACATTTCAGCGCTGGCTTGTAAGCCTGCACAGACTTTCGGTCGCAGTGGCGAGGTGAAAATTTTACAGCGTTGCTGTTCATCAAGCTGAATGCAGGGCGTATTGGCGGGCTTGCCATCTGGCATACCGGGAATAGGGCTGGAAATTGAAGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGA > NC_000913/2265086‑2265372 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |