Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 443,420 A→G G74G (GGT→GGC yajL ← oxidative‑stress‑resistance chaperone

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913443,4200AG100.0% 143.8 / NA 41G74G (GGT→GGCyajLoxidative‑stress‑resistance chaperone
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (20/21);  total (20/21)

TACCAATCGGGAAGATATCGTGCGGCACCAGCACGGTGGCTGGCGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCACCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCTGGCGACGCTGGCAGTGGTGACTTTGATACCGCCGCGAA  >  NC_000913/443275‑443565
                                                                                                                                                 |                                                                                                                                                 
tACCAATCGGGAAGATATCGTGCGGCACCAGCACGGTGGCTGGCGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAg                                                                                                                                               <  2:643525/150‑1 (MQ=255)
    aaTCGGGAAGATATCGTGCGGCACCAGCACGGTGGCTGGCGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGgcagc                                                                                                                                          <  1:577625/151‑1 (MQ=255)
     aTCGGGAAGATATCGTGCGGCACCAGCACGGTGGCTGGCGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGgcagc                                                                                                                                          >  2:715804/1‑150 (MQ=255)
       cGGGAAGATATCGTGCGGCACCAGCACGGTGGCTGGCGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACg                                                                                                                                       <  1:281023/151‑1 (MQ=255)
         ggAAGATATCGTGCGGCACCAGCACGGTGGCTGGCGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGAt                                                                                                                                     <  2:45916/151‑1 (MQ=255)
          gAAGATATCGTGCGGCACCAGCACGGTGGCTGGCGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATc                                                                                                                                    >  2:760277/1‑151 (MQ=255)
           aaGATATCGTGCGGCACCAGCACGGTGGCTGGCGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATc                                                                                                                                    >  1:411120/1‑150 (MQ=255)
                atCGTGCGGCACCAGCACGGTGGCTGGCGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCa                                                                                                                              <  1:493000/151‑1 (MQ=255)
                  cGTGCGGCACCAGCACGGTGGCTGGCGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCat                                                                                                                             <  1:671766/150‑1 (MQ=255)
                    tGCGGCACCAGCACGGTGGCTGGCGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATAtt                                                                                                                          >  2:392335/1‑151 (MQ=255)
                     gCGGCACCAGCACGGTGGCTGGCGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTc                                                                                                                         <  2:474769/151‑1 (MQ=255)
                     gCGGCACCAGCACGGTGGCTGGCGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTc                                                                                                                         <  2:573250/151‑1 (MQ=255)
                              gCACGGTGGCTGGCGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGc                                                                                                                >  2:72115/1‑151 (MQ=255)
                                     ggctggcGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTc                                                                                                          <  1:222611/150‑1 (MQ=255)
                                     ggctggcGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTc                                                                                                          <  2:660577/150‑1 (MQ=255)
                                         ggcgcggcgcAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGAcc                                                                                                      <  2:641067/150‑1 (MQ=255)
                                         ggcgcggcgcAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGAc                                                                                                       <  2:198620/149‑1 (MQ=255)
                                              ggcgcAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAgcggc                                                                                                <  2:15730/151‑1 (MQ=255)
                                                 gcAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCa                                                                                             <  1:577842/151‑1 (MQ=255)
                                                   aaaTAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATc                                                                                           >  1:477997/1‑151 (MQ=255)
                                                    aaTAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATcc                                                                                          >  1:462280/1‑151 (MQ=255)
                                                      tAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGc                                                                                        >  1:369507/1‑151 (MQ=255)
                                                      tAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGc                                                                                        >  2:673388/1‑151 (MQ=255)
                                                        gCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCca                                                                                      <  2:654707/151‑1 (MQ=255)
                                                          cgcgACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCcagc                                                                                    <  1:502890/151‑1 (MQ=255)
                                                           gcgACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCcagc                                                                                    >  2:529648/1‑150 (MQ=255)
                                                                   aCGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCAcg                                                                           >  1:191088/1‑151 (MQ=255)
                                                                    cGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCAcgc                                                                          >  2:528070/1‑151 (MQ=255)
                                                                          gAACGGTGGAACTGTTTAACGGTTTCACCCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGACCACGTCATATGCGCCACCAGCCACTGCGACCAGCGGCGCATCCGCCAGCAGCTTCAcgccg                                                                        <  1:179359/147‑1 (MQ=255)
                                                                                    aCTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAAt                                                          >  2:323817/1‑151 (MQ=255)
                                                                                           aaCGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAg                                                    <  1:219460/150‑1 (MQ=255)
                                                                                               gTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAGGTTAc                                               >  2:236371/1‑151 (MQ=255)
                                                                                                 ttCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAGGTTAcc                                              <  1:42373/150‑1 (MQ=255)
                                                                                                      ccAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCt                                        >  2:284042/1‑151 (MQ=255)
                                                                                                       cagcagAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCTg                                       >  2:510194/1‑151 (MQ=255)
                                                                                                       cagcagAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCTg                                       >  2:670389/1‑151 (MQ=255)
                                                                                                                   aTCGCGAAAACACTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCTGGCGACGCTGGc                            <  2:408236/150‑1 (MQ=255)
                                                                                                                               cTCCGCGCCTTTAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCTGGCGACGCTGGCAGTGGTGACTTTg               >  2:640173/1‑151 (MQ=255)
                                                                                                                                        tttAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCTGGCGACGCTGGCAGTGGTGACTTTGATAccgccg      >  1:206818/1‑151 (MQ=255)
                                                                                                                                          tAATGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCTGGCGACGCTGGCAGTGGTGACTTTGATACCGCcgcg    >  1:753436/1‑151 (MQ=255)
                                                                                                                                            aTGCCGCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCTGGCGACGCTGGCAGTGGTGACTTTGATACCGCCGCGaa  <  1:658078/151‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                 
TACCAATCGGGAAGATATCGTGCGGCACCAGCACGGTGGCTGGCGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCACCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCTGGCGACGCTGGCAGTGGTGACTTTGATACCGCCGCGAA  >  NC_000913/443275‑443565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: