Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,583,067	A→G	C207C (TGT→TGC)	ydeO ←	UV‑inducible global regulator, EvgA‑, GadE‑dependent

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,583,067	0	A	G	100.0%	209.3 / NA	57	C207C (TGT→TGC)	ydeO	UV‑inducible global regulator, EvgA‑, GadE‑dependent
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (21/36);  total (21/36)

AAATAATCAAATAGCTAAAGCATTCATCGTGTTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCACATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTAAGTTTTTTCTTCAACAGGCTTTCACTGATGTACAGGCA  >  NC_000913/1582920‑1583213                                                                                                                                                    |                                                                                                                                                   aaaTAATCAAATAGCTAAAGCATTCATCGTGTTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCAt                                                                                                                                                 >  1:712052/1‑151 (MQ=255)  aataatCAAATAGCTAAAGCATTCATCGTGTTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCAtt                                                                                                                                                <  2:370235/151‑1 (MQ=255)  aataatCAAATAGCTAAAGCATTCATCGTGTTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCAtt                                                                                                                                                <  1:648933/151‑1 (MQ=255)  aataatCAAATAGCTAAAGCATTCATCGTGTTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCAtt                                                                                                                                                <  1:294213/151‑1 (MQ=255)   ataatCAAATAGCTAAAGCATTCATCGTGTTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTg                                                                                                                                               >  1:580765/1‑151 (MQ=255)        cAAATAGCTAAAGCATTCATCGTGTTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCgg                                                                                                                                          >  1:374165/1‑151 (MQ=255)         aaaTAGCTAAAGCATTCATCGTGTTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGc                                                                                                                                         >  1:750869/1‑151 (MQ=255)         aaaTAGCTAAAGCATTCATCGTGTTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGc                                                                                                                                         <  2:646292/151‑1 (MQ=255)                 aaaGCATTCATCGTGTTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAAtttt                                                                                                                                   <  1:428058/149‑1 (MQ=255)                  aaGCATTCATCGTGTTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTAtt                                                                                                                                <  2:4794/151‑1 (MQ=255)                    gCATTCATCGTGTTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGa                                                                                                                              <  2:549437/151‑1 (MQ=255)                    gCATTCATCGTGTTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGa                                                                                                                              <  1:151393/151‑1 (MQ=255)                      aTTCATCGTGTTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACt                                                                                                                            <  2:671629/151‑1 (MQ=255)                        tCATCGTGTTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTg                                                                                                                           <  2:662755/150‑1 (MQ=255)                               gtTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCt                                                                                                                   <  1:153372/151‑1 (MQ=255)                                 tGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTAc                                                                                                                 >  1:566415/1‑151 (MQ=255)                                  gCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTAcg                                                                                                                >  2:319326/1‑151 (MQ=255)                                  gCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTAc                                                                                                                 <  1:232582/150‑1 (MQ=255)                                   cccGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTAcgc                                                                                                               <  1:312034/151‑1 (MQ=255)                                      gTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGt                                                                                                             >  2:489144/1‑150 (MQ=255)                                       tATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTAt                                                                                                           >  1:373448/1‑151 (MQ=255)                                        aTTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATc                                                                                                          <  2:739164/151‑1 (MQ=255)                                           cATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCaa                                                                                                        <  1:579075/150‑1 (MQ=255)                                            aTACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAAt                                                                                                      >  2:302775/1‑151 (MQ=255)                                             tACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAAtt                                                                                                     >  2:667245/1‑151 (MQ=255)                                               cccGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAAttt                                                                                                    <  1:720015/150‑1 (MQ=255)                                                            gACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCAt                                                                                      <  2:154248/151‑1 (MQ=255)                                                                  ggTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGc                                                                                <  2:397789/151‑1 (MQ=255)                                                                     aCTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATc                                                                             <  1:504049/151‑1 (MQ=255)                                                                        ccTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCt                                                                            <  2:373495/149‑1 (MQ=255)                                                                           tAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTaaa                                                                         >  1:214840/1‑149 (MQ=255)                                                                              aaaCTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAAt                                                                    <  1:489092/151‑1 (MQ=255)                                                                                   ctctTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCtgtg                                                               >  1:102209/1‑151 (MQ=255)                                                                                     ctTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCtgt                                                                <  2:30396/148‑1 (MQ=255)                                                                                       tCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTgag                                                             <  2:601029/149‑1 (MQ=255)                                                                                       tCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTga                                                              <  2:67961/148‑1 (MQ=255)                                                                                             tGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGt                                                     >  2:72401/1‑151 (MQ=255)                                                                                              gTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGtt                                                    >  1:566139/1‑151 (MQ=255)                                                                                                tGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGttt                                                   <  2:136036/150‑1 (MQ=255)                                                                                                 gCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGc                                                 <  1:651460/151‑1 (MQ=255)                                                                                                 gCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGc                                                 >  2:638734/1‑151 (MQ=255)                                                                                                  ccGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGct                                                >  2:521055/1‑151 (MQ=255)                                                                                                           ttGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTa                                        >  2:139750/1‑150 (MQ=255)                                                                                                           ttGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTa                                        <  1:770711/150‑1 (MQ=255)                                                                                                               ggAACGCATAAATAAAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTAAGttt                                   >  1:25715/1‑151 (MQ=255)                                                                                                                      ataaataaAATAAGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTAAGTTTTttcttc                            <  2:494662/151‑1 (MQ=255)                                                                                                                          ataaaataaGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTAAGTTTTTCCTTCAAc                         >  2:207658/1‑150 (MQ=255)                                                                                                                            aaaataaGATGTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTAAGTTTTTTCTTCAACAgg                      <  2:712126/151‑1 (MQ=255)                                                                                                                              aataaGATGTACTGGCATAACCGCATTGTTCGGCATTTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTAAGTTTTTTCTTCAACAGGCt                    <  1:7101/151‑1 (MQ=255)                                                                                                                                      gTACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTAAGTTTTTTCTTCAACAGGCTTTCACTg             <  2:485431/150‑1 (MQ=255)                                                                                                                                       tACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTAAGTTTTTTCTTCAACAGGCTTTCACTGAt           >  2:636760/1‑151 (MQ=255)                                                                                                                                       tACTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTAAGTTTTTTCTTCAACAGGCTTTCACTGAt           >  2:624926/1‑151 (MQ=255)                                                                                                                                        aCTGGCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTAAGTTTTTTCTTCAACAGGCTTTCACTGATg          <  2:144464/151‑1 (MQ=255)                                                                                                                                           ggCATAACCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTAAGTTTTTTCTTCAACAGGCTTTCACTGATGt         <  1:562457/149‑1 (MQ=255)                                                                                                                                                aaCCGCATTGTTCGTCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTAAGTTTTTTCTTCAACAGGCTTTCACTGATGTACAGGCa  <  1:70520/151‑1 (MQ=255)                                                                                                                                                aaCCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTAAGTTTTTTCTTCAACAGGCTTTCACTGATGTACAGGc   <  1:267668/150‑1 (MQ=255)                                                                                                                                                aaCCGCATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTAAGTTTTTTCTTCAACAGGCTTTCACTGATGTACAGGc   <  1:142741/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                   AAATAATCAAATAGCTAAAGCATTCATCGTGTTGCCCGTATTCATACCCGTGTGACTTTGACAACGGTACTCCTTAGAAACTCTCTTCGGACTGTTGCCGAAATGTTTGCGGAACGCATAAATAAAATAAGATGTACTGGCATAACCACATTGTTCGGCAATTTTATTGACTGAACCTTCTACGCGTATCAAATTTTTTGCGTGCTGCATTCTTGCATCTAAAAGAATCTGTGAGAATGTCGTTTGCTCTTGCTTAAGTTTTTTCTTCAACAGGCTTTCACTGATGTACAGGCA  >  NC_000913/1582920‑1583213

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑