Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,543,608 Δ1 bp :: IS186 (–) +6 bp :: Δ1 bp coding (494‑499/549 nt) fimA → major type 1 subunit fimbrin (pilin)

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2514274 =NA (NA)47 (0.830) 41/292 0.7 97.8% noncoding (2/1345 nt) IS186 repeat region
?NC_000913 4543608 = 1 (0.020)coding (494/549 nt) fimA major type 1 subunit fimbrin (pilin)
* ? NC_000913 = 2515616NA (NA)55 (0.970) 46/292 0.4 98.1% noncoding (1344/1345 nt) IS186 repeat region
?NC_000913 = 4543613 1 (0.020)coding (499/549 nt) fimA major type 1 subunit fimbrin (pilin)

Only 100 of 102 total aligned reads displayed.

CAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATGAAAAGGAAGAGATTATTTCTATTAGCGT  >  NC_000913/4543470‑4543758
                                                                                                                                          |                                                                                                                                                      
caacaaACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccata                                                                                                                                             <  1:99442‑M2/150‑7 (MQ=255)
  tacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGtg                                                                                                                                          >  1:718795‑M2/137‑151 (MQ=255)
       gccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTgctgct                                                                                                                                     <  1:374083‑M2/20‑1 (MQ=255)
       gccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagtgagcgcttatgggCCGCAACCCCGGGTgctgct                                                                                                                                     <  1:742994‑M2/20‑1 (MQ=255)
        ccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTgctgct                                                                                                                                     >  1:684260‑M2/131‑150 (MQ=255)
          gaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAAt                                                                                                                                  <  2:540484‑M2/23‑1 (MQ=255)
            gtgtGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaa                                                                                                                                >  2:221780‑M2/1‑132 (MQ=255)
            gtgtGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaa                                                                                                                                >  2:480087‑M2/1‑132 (MQ=255)
            agtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggaCCGCAACCCCGGGTGCTGCTAATGc                                                                                                                                <  2:478811‑M2/25‑1 (MQ=255)
             gtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCg                                                                                                                                              <  1:622583‑M2/11‑1 (MQ=255)
             gtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCg                                                                                                                                              >  2:622534‑M2/126‑136 (MQ=255)
             gtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCg                                                                                                                               <  1:210798‑M2/26‑1 (MQ=255)
             gtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCg                                                                                                                               <  2:221307‑M2/26‑1 (MQ=255)
                gCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggt                                                                                                                            <  1:477910‑M2/151‑24 (MQ=255)
                 ccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGAt                                                                                                                            <  2:174753‑M2/29‑1 (MQ=255)
                  cagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGc                                                                                                                          >  2:783403‑M2/121‑151 (MQ=255)
                  aGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttg                                                                                                                          <  2:830812‑M2/151‑26 (MQ=255)
                   agttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCg                                                                                                                         <  2:250941‑M2/32‑1 (MQ=255)
                     tCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaac                                                                                                                       <  2:626115‑M2/151‑29 (MQ=255)
                      ccTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaacc                                                                                                                      <  1:332968‑M2/151‑30 (MQ=255)
                        tGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccat                                                                                                                    <  1:181641‑M2/151‑32 (MQ=255)
                         ggACAGAACGGGAGCTGCGCTGAAGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATACCGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGTGGCCGCAAcccataagcgctaacttaagggttgaacca                                                                                                                     >  2:522425‑M2/1‑119 (MQ=255)
                           aCAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctg                                                                                                                 >  1:161638‑M2/1‑117 (MQ=255)
                            ggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAg                                                                                                                <  2:15828‑M2/41‑1 (MQ=255)
                            cAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctga                                                                                                                >  1:49595‑M2/1‑116 (MQ=255)
                             gcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAgg                                                                                                               <  2:853639‑M2/42‑1 (MQ=255)
                              gAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaag                                                                                                              >  2:805768‑M2/1‑114 (MQ=255)
                              gAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctga                                                                                                                <  2:446538‑M2/149‑36 (MQ=255)
                               ttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGtt                                                                                                             >  2:320478‑M2/108‑151 (MQ=255)
                                taccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGt                                                                                                              <  2:878117‑M2/43‑1 (MQ=255)
                                taccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGt                                                                                                              <  2:293588‑M2/43‑1 (MQ=255)
                                         gggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAAt                                                                                                   <  1:452602‑M2/54‑1 (MQ=255)
                                           gcTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctc                                                                                                 <  2:705737‑M2/151‑51 (MQ=255)
                                           gcTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctc                                                                                                 >  2:438438‑M2/1‑101 (MQ=255)
                                           gcTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctc                                                                                                 >  1:740893‑M2/1‑101 (MQ=255)
                                              gACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAAGCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcgt                                                                                               >  2:37970‑M2/1‑98 (MQ=255)
                                               gaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGGTCAGTATCAATAACCt                                                                                              >  2:777207‑M2/92‑150 (MQ=255)
                                                aattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTAc                                                                                            >  2:3557‑M2/91‑151 (MQ=255)
                                                 gCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcc                                                                                           <  1:16834‑M2/151‑57 (MQ=255)
                                                   tGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctc                                                                                         <  1:317357‑M2/151‑59 (MQ=255)
                                                    ggATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctc                                                                                         >  1:526658‑M2/1‑92 (MQ=255)
                                                    ggATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcct                                                                                          >  1:647237‑M2/1‑92 (MQ=255)
                                                      aTGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgtt                                                                                      >  1:848718‑M2/1‑90 (MQ=255)
                                                       gaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAgg                                                                                       <  2:531716‑M2/66‑1 (MQ=255)
                                                           gCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagac                                                                                 >  1:322313‑M2/1‑85 (MQ=255)
                                                           agttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAgg                                                                                 >  2:572096‑M2/80‑151 (MQ=255)
                                                           agttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAgg                                                                                 >  1:163545‑M2/80‑151 (MQ=255)
                                                             ttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAggg                                                                                >  2:376823‑M2/78‑150 (MQ=255)
                                                                aTTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgc                                                                            <  1:428714‑M2/151‑72 (MQ=255)
                                                                 tttAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcc                                                                           <  2:141771‑M2/151‑73 (MQ=255)
                                                                 cgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTc                                                                           <  1:190976‑M2/78‑1 (MQ=255)
                                                                   tAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctc                                                                         <  1:424500‑M2/151‑75 (MQ=255)
                                                                     gTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgc                                                                       <  2:591010‑M2/151‑77 (MQ=255)
                                                                     agagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTa                                                                       <  1:256816‑M2/82‑1 (MQ=255)
                                                                      gagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTAc                                                                      >  1:349008‑M2/69‑151 (MQ=255)
                                                                         aGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttc                                                                   >  1:14524‑M2/1‑71 (MQ=255)
                                                                          gAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttct                                                                  >  1:116409‑M2/1‑70 (MQ=255)
                                                                           attcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCa                                                                 <  2:627125‑M2/88‑1 (MQ=255)
                                                                           aaaCAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttctt                                                                 <  1:786587‑M2/151‑83 (MQ=255)
                                                                              catcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAggg                                                              >  1:304290‑M2/61‑151 (MQ=255)
                                                                              caacCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAggg                                                              >  1:343431/1‑151 (MQ=255)
                                                                               atcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAggg                                                              >  2:859587‑M2/60‑150 (MQ=255)
                                                                                 cccTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattg                                                           <  2:510828‑M2/151‑89 (MQ=255)
                                                                                 cccTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattg                                                           <  2:747779‑M2/151‑89 (MQ=255)
                                                                                     gAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcg                                                         >  2:246706‑M2/1‑59 (MQ=255)
                                                                                          aaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTGATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCtt                                                  >  1:310312‑M2/49‑151 (MQ=255)
                                                                                          aaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCtt                                                  >  2:782572‑M2/49‑151 (MQ=255)
                                                                                          aCGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttatgggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgtgttcttcaattgcgttttgt                                                   <  2:340059‑M2/150‑97 (MQ=255)
                                                                                          aCGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgt                                                   <  2:152526‑M2/150‑97 (MQ=255)
                                                                                          aCGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgt                                                   <  2:511340‑M2/150‑97 (MQ=255)
                                                                                           cGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtag                                                 >  1:268252‑M2/1‑53 (MQ=255)
                                                                                            atcatatcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTtgt                                                <  1:344882‑M2/105‑1 (MQ=255)
                                                                                                 atcaggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGAt                                           >  1:32934‑M2/42‑151 (MQ=255)
                                                                                                   caggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATa                                          <  2:590869‑M2/111‑1 (MQ=255)
                                                                                                    tACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagg                                        <  1:771930‑M2/151‑108 (MQ=255)
                                                                                                     ggcgtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATaaa                                        >  2:430526‑M2/38‑150 (MQ=255)
                                                                                                       cATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggat                                     >  1:223872‑M2/1‑41 (MQ=255)
                                                                                                        gtaataccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATa                                    <  1:110156‑M2/117‑1 (MQ=255)
                                                                                                             accacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGa                                <  2:777454‑M2/121‑1 (MQ=255)
                                                                                                              ccacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATg                              <  1:398848‑M2/123‑1 (MQ=255)
                                                                                                               cacaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATg                              >  2:573706‑M2/28‑150 (MQ=255)
                                                                                                                ccAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtccc                             <  1:713044‑M2/150‑119 (MQ=255)
                                                                                                                ccAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtccc                             <  2:107040‑M2/150‑119 (MQ=255)
                                                                                                                  aGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacg                          >  1:857085‑M2/1‑30 (MQ=255)
                                                                                                                    gcgcGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaa                        >  2:884558‑M2/1‑28 (MQ=255)
                                                                                                                    gcgcGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacga                         <  1:101753‑M2/150‑123 (MQ=255)
                                                                                                                    cccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATGAAAAgg                        >  1:891412‑M2/23‑151 (MQ=255)
                                                                                                                     cgcgTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaat                       >  1:446585‑M2/1‑27 (MQ=255)
                                                                                                                      gcgTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatg                      >  2:663984‑M2/1‑26 (MQ=255)
                                                                                                                         ttATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggcc                   <  2:319754‑M2/151‑129 (MQ=255)
                                                                                                                         ttATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggcc                   <  2:777877‑M2/151‑129 (MQ=255)
                                                                                                                         aagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATGAAAAGGAaga                    <  1:654403‑M2/133‑1 (MQ=255)
                                                                                                                          tATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggcc                   >  2:327054‑M2/1‑22 (MQ=255)
                                                                                                                          tATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggcc                   <  1:536434‑M2/150‑129 (MQ=255)
                                                                                                                                  aaCCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaag          >  2:148714‑M2/1‑14 (MQ=255)
                                                                                                                                  aaCCGGGGCCGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaag          >  1:852191‑M2/1‑14 (MQ=255)
                                                                                                                                   ttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATGAAAAGGAAGAGATTATTTCt          >  2:696844‑M2/8‑150 (MQ=255)
                                                                                                                                    tatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATGAAAAGGAAGAGATTATTTCTa         <  2:239621‑M2/144‑1 (MQ=255)
                                                                                                                                     atgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTCCGGGCAGGGATGCCCACCCTTGTGCGATAAAAAGAACGATGAAAAGGAAGAGATTATTTCTa         <  2:733443‑M2/144‑1 (MQ=255)
                                                                                                                                          ccGCAAcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaagctccagat  >  1:278353‑M2/1‑6 (MQ=255)
                                                                                                                                          |                                                                                                                                                      
CAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATGAAAAGGAAGAGATTATTTCTATTAGCGT  >  NC_000913/4543470‑4543758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.