Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,228,2750TC45.1% 45.0 / 13.1 52pseudogene (335/1287 nt)mdtQpseudogene; putative channel/filament proteins
Reads supporting (aligned to +/- strand):  ref base T (15/13);  new base C (10/13);  total (25/27)
Fisher's exact test for biased strand distribution p-value = 5.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTGCTCGC‑GTTCCGCCGCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCGCCC‑GATTCTTTCCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCC  >  NC_000913/2228126‑2228424
                                                                                                                                                         |                                                                                                                                                       
gCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTGCTCGC‑GTTCCGCCGCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCt                                                                                                                                                         <  2:405576/150‑1 (MQ=255)
     ttttCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTGCTCGC‑GTTCCGCCGCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCg                                                                                                                                                      <  1:154938/148‑1 (MQ=255)
     ttttCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTGCTCGC‑GTTCCGCCGCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCGcc                                                                                                                                                    <  2:846855/150‑1 (MQ=255)
         cTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTTCTCGC‑GTTCCCCCGCCCCTGC‑TTTAACCGTACCCAGGC‑GGGGAGGAACCTCCGCCC‑GAtt                                                                                                                                              >  1:594099/1‑151 (MQ=255)
         cTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGGTTGCTCGC‑GGTCCGCCGCCCGTGC‑TTTAACCCGACCCAGGC‑GGGGAGGAAACTCCGCCC‑GAtt                                                                                                                                              >  1:772348/1‑151 (MQ=255)
          tATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGGTTTCTCCC‑GTTCCGCCGCCCCTGC‑TTTTACCCTACCCAGGC‑GGGCAGGAAACCCCCCCC‑CAtt                                                                                                                                              >  1:112171/1‑150 (MQ=255)
          tATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGGTTGCTCGC‑GTTCCCCCGCCCCTGC‑TTTTAACCTACCCAGGC‑GGGCAGTAACCCCCCCCC‑CAtt                                                                                                                                              >  1:755193/1‑150 (MQ=255)
           aTTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGTTGCCAGCCCGCAATT‑GGCGGGGTTGGTCTC‑GTTTCGCCCCCCCTGC‑TTTTACCGTGTCCCGGC‑GGGCAGCAAACTTCGccccttttt                                                                                                                                             >  2:829164/1‑145 (MQ=255)
             ttGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTGCTCGC‑GTTCCGCCGCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCGCCC‑GATTCtt                                                                                                                                           <  2:781483/150‑1 (MQ=255)
             ttGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGGTTTCTCCC‑GTTTCGCCGCCCGGGC‑TTTTACCCTTCCCCGGC‑GGGGGGTGACccccccccccgtcttt                                                                                                                                           >  2:804626/1‑143 (MQ=255)
              tgctgcAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGGTTTCCCGC‑GGTCCCCCGCCCCTGC‑TTTTACCCTACCCCGGC‑GGGCAGTAACCTCCGCCC‑GCTTCttt                                                                                                                                          >  2:704867/1‑150 (MQ=255)
               gctgcAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTGCTCGC‑GTTCCGCCGCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCGCCC‑GATTCTTTc                                                                                                                                         <  2:363133/150‑1 (MQ=255)
                  gcAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGGTTTCTCCC‑GTTCCCCCCCCCGGGC‑TTTAAACCTACCCCCGC‑GGGCCGGAACCCCCCCCC‑CATTCTTTtcccc                                                                                                                                     >  2:264557/1‑150 (MQ=255)
                   cAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTGCTCGC‑GTTCCGCCGCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCGCCC‑GATTCTTTCCCCAg                                                                                                                                    <  2:615803/151‑1 (MQ=255)
                     aGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTGCTCGC‑GTTCCGCCGCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCGCCC‑GATTCTTTCCCCAGat                                                                                                                                  <  1:405517/151‑1 (MQ=255)
                       aCCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCCGCAATT‑GGCGGGGTTTGTCGC‑GGTCCGCCCCCCCCGC‑CTTAAACCTCCCCCGGC‑GGGGAGTAACCCCCGCCC‑CAGTCCTTccccccaca                                                                                                                                 >  2:118658/1‑145 (MQ=255)
                       aCCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTTCTCGC‑GTTCCCCCGCCCCTGC‑TTTTAACGTACCCAGGC‑GGGGAGTAAACTCCCCCC‑CGTTTTTTtccc                                                                                                                                      >  1:818970/1‑145 (MQ=255)
                                aaCGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTGCTCGC‑GTTCCGCCGCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCGCCC‑GATTCTTTCCCCAGATATCGAGATGcc                                                                                                                       <  1:693108/151‑1 (MQ=255)
                                aaCGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTGCCCGC‑GTTCCGCCGCCCCGGC‑TTTTACCGCACCCAGGC‑GGGGAGGAACCCCCGCCC‑GATTCTTTcccccg                                                                                                                                    >  1:176098/1‑136 (MQ=255)
                                aaCGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGGTTTCTCGC‑GGTCCGCCGCCCCTGC‑TTTTAACCCACCCAGGCGGGGCGGAAACCCCCCCCC‑CTTTTTTTCCCC‑GATTTCGGGATGcc                                                                                                                       >  2:765802/1‑151 (MQ=255)
                                 aCGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTGCTCGC‑GTTCCGCCGCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCGCCC‑GATTCTTTCCCCAGATATCGAGATGCCa                                                                                                                      <  1:431281/151‑1 (MQ=255)
                                     cgccTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGGTTTGTCGC‑GTTTCGCCCCCCCGGC‑TTTAAACGTACCCCGGG‑GGGCAGTAACCCCCGCCC‑GCTTCTTTCCCCAGATAACGAGATGCCA‑Gccc                                                                                                                 >  1:224598/1‑151 (MQ=255)
                                          gggTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTGCTCGC‑GTTCCGCCGCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCGCCC‑GATTCTTTCCCCAGATATCGAGATGCCA‑GCccgccg                                                                                                             <  1:249204/150‑1 (MQ=255)
                                                 ccACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGGTTTGTCGC‑GGTCCGCCGCCCGTGC‑TTTAACCGTACCCCGGC‑GGGCGGGAACCCCCCCCC‑GATTCTTTTCCCCGATATTCAGATGGCAGGCCCGCC‑TTAAGcc                                                                                                      >  2:413545/1‑150 (MQ=255)
                                                       ccAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTTGTCGC‑GTTCCGCCGCCCGTGC‑TTTTACCCTACCCAGGC‑GGGCAGCAAACTCCCCCC‑GCCTCTTTCCCCCGAAATCGAAATGCCA‑CCCCCCCCTTAAAGCaaaaaa                                                                                                >  2:680341/1‑148 (MQ=255)
                                                       ccAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGGTTTCTCCCGGTCCCCCCCCCCGGGC‑TTTAACC‑TACCCCGGC‑GGGCCGCAAACCCCCCCC‑CACTCTTTCCCCACATAATGGGGGGCCA‑GCCCCCCCCTTAACCaaaa                                                                                                  >  2:114073/1‑148 (MQ=255)
                                                         agaacgggggggTTACTCTCCCAGCCACCATTT‑GGCGGGTTTGCCCGC‑GTCCCGCCGCCCGTGC‑TTCAACCGTCCCCAGGC‑GGGCGGTACCCCCCGCCC‑GATTCTTTCCCCAAATAACGAGATCCCA‑GCCCGCCGTTAAGCCAAAAGTAcc                                                                                             <  2:107750/142‑1 (MQ=255)
                                                         aGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTGCTCGC‑GTTCCGCCCCCCCTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCCCCC‑GATTCTTTTCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTAcc                                                                                             >  1:426074/1‑151 (MQ=255)
                                                           tACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGGTTGCTCGC‑GTTTCGCCGCCCCTGCTTTTAACCG‑ACCCCCGG‑GGGCAGAAACCCCCGCCCGGATTCTTT‑CCCACATATCGAGAGGCCA‑ACCCGCCCCTAAACCAAAAGGAcc                                                                                             >  1:338785/1‑149 (MQ=255)
                                                              aGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTTCTCGC‑GGTCCGCCGCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCCCCC‑GCTTCTTTCCCCCGATATCGAGATGCCC‑GCCCGCCGTTAAGCCCAAAAGACCGTTgg                                                                                        >  2:343316/1‑151 (MQ=255)
                                                               ggcgggtatggCTGCCAGCCAGCAATT‑GGCGGGTTTGCCCCC‑GTTCCCCCGCCCGTGC‑TTTACCCGTACCCAGGG‑GGGCATTACCCCCCGCCC‑GTTTTTTTCCCCAGATATCGGGAGGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTgg                                                                                        <  1:817791/140‑1 (MQ=255)
                                                               ggcggcCTCCGCTGCCCGCCA‑CAATTGGGCGGTTTTGCCCGC‑GTCCCGCCCCCCGTGT‑TTTACCCTTCCCCGGGC‑GGGCAGAACCCCCCCCCC‑GATTCTTCCCCCAGTTATGGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGt                                                                                           <  2:382644/147‑1 (MQ=255)
                                                                     cTACGCTGCCAGCCAGCAATT‑GGCGGGTTTGCTCGC‑GTTCCGCCGCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCGCCC‑GATTCTTTCCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTAcc                                                                                  >  1:286059/1‑150 (MQ=255)
                                                                     cTACGCTGCCAGCCAGCAATT‑GGCGGGTTTGCTCGC‑GTTCCGCCGCCCGCGC‑TTTAACCGTACCCCGGC‑GGGCAGTAACCTCCGCCC‑GGTTCTTTCCCCAGATATCGAGATGCCC‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTAcc                                                                                  >  2:670916/1‑150 (MQ=255)
                                                                          cTGCCAGCCAGCAATT‑GGCGGGTTTGCTCGC‑GTTCCGCCGCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGGAACCTCCGCCC‑GATTCTTTCCCCAGATATCGAGATGCCA‑GCCCCCCGTTAAGCCAAAAACAACGTTGGGGTACCACcgg                                                                             >  2:39011/1‑150 (MQ=255)
                                                                             ccagccagCAGTG‑GGGGGTTTTCCCCGC‑TTCCCGCCCCCCGTGC‑TTTACCCGTCCCCGGGC‑GGGCAGTACCCCCCGCCC‑GATTCTTCCCCCAGATACCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGcc                                                                           <  2:461533/149‑1 (MQ=255)
                                                                              cagccaccAATG‑GGCGGGTTTGCTCGC‑GTCCCGCCGCCCGTGC‑TTTACCCGTCCCCAGGC‑GGGCAGTACCCTCCGCCC‑GATTCTTTCCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCa                                                                                 <  2:757706/142‑1 (MQ=255)
                                                                                              gggTTTGCTCGC‑TTTCCGCCGCCCGTGC‑TTTACCCGTCCCCGGGC‑GGGAAGTAACCCCCGCCC‑GATTCTTTCCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGcc                                                           <  1:287836/149‑1 (MQ=255)
                                                                                                         gctttCCGCCGCCCGTGT‑TTTACCCGTCCCAAGGC‑GGGAAGTACCCCCCGCCC‑TATTCTTTCCCCAGATATCGGGAGGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCag                                                <  2:654274/147‑1 (MQ=255)
                                                                                                           gTTCCGCCGCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCGCCC‑GATTCTTTCCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGc                                             >  1:427521/1‑151 (MQ=255)
                                                                                                            ttCCGCCGCCCGTGT‑TTTACCCGTCCCCAGGC‑GGGCAGTACCCCCCCCCC‑GATTCTTTCCCCAGATATCGAGTTGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTc                                                  <  1:647830/145‑1 (MQ=255)
                                                                                                            tcccgccgCCCGTGT‑TTTACCCGTACCCAGGC‑GGGAAGTACCCCCCGCCC‑GATTCTTTCCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGtt                                                   <  1:573123/142‑1 (MQ=255)
                                                                                                              ccgccgCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCGCCC‑GATTCTTTCCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCaa                                           >  1:678483/1‑150 (MQ=255)
                                                                                                              ccgcccCCCGTGC‑TTTAACATCCCCCGGGG‑GGCCAGTCCCCTCCGCCC‑GATTCTTCCCCCAGATTCCGGGTGGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCaaa                                          <  2:687693/151‑1 (MQ=255)
                                                                                                              cccccgccCGTGT‑TTAACCCGTCCCCGGGC‑GGGCAGTACCCCCCGCCC‑GTTTCTTCCCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCa                                                 <  2:757958/141‑1 (MQ=255)
                                                                                                                    cccGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCGCCC‑GATTCTTTCCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGAGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGccc                                    >  1:672825/1‑151 (MQ=255)
                                                                                                                         gC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCGCCC‑GATTCTTTCCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCAt                                 >  2:344292/1‑149 (MQ=255)
                                                                                                                            tttACCCGTCCCCAGGC‑GGGCAGTAACCCCCCCCC‑GATTCTTTCCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTa                               <  1:264583/149‑1 (MQ=255)
                                                                                                                             ttAACCGTCCCCAGGC‑GGGCAGTACCCCCCCCCC‑GATTCTTCCCCCAGATATCGAGAGGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAg                             <  1:83163/150‑1 (MQ=255)
                                                                                                                               accctaccccGGGC‑GGGCAGTACCCCCCGCCC‑GATTTTTCCCCCAGATACCGAGATCCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCAtt                                <  2:416775/138‑1 (MQ=255)
                                                                                                                                      cccAGGC‑GGGCAGTACCCTCCGCCC‑GATTCTTTCCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGc                     <  2:211058/149‑1 (MQ=255)
                                                                                                                                      cccAGGC‑GGGCAGTACCCTCCCCCC‑GATTCTTCCCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTg                      <  1:95009/148‑1 (MQ=255)
                                                                                                                                                   gtcaCCCCCCCCC‑GTTTTTTCCCCCACATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACAtttttt          <  2:684935/145‑1 (MQ=255)
                                                                                                                                                    tAACCGCCACCC‑GATACTCCCCCAAGATACCGATTCGCGA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACAttt             <  2:773508/144‑1 (MQ=255)
                                                                                                                                                         tCCGCCC‑GATTCTTTCCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTcc  >  2:518908/1‑150 (MQ=255)
                                                                                                                                                         tCCGCCC‑GATTCTTTCCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTcc  >  2:141431/1‑150 (MQ=255)
                                                                                                                                                         |                                                                                                                                                       
GCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATT‑GGCGGGTTTGCTCGC‑GTTCCGCCGCCCGTGC‑TTTAACCGTACCCAGGC‑GGGCAGTAACCTCCGCCC‑GATTCTTTCCCCAGATATCGAGATGCCA‑GCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCC  >  NC_000913/2228126‑2228424

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑