Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 398,614 A→G N248S (AAC→AGC)  yaiW → microcin Bac7 uptake protein; outer membrane surface‑exposed lipoprotein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913398,6140AG100.0% 159.9 / NA 46N248S (AAC→AGC) yaiWmicrocin Bac7 uptake protein; outer membrane surface‑exposed lipoprotein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (20/26);  total (20/26)

CAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAACGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCAAAACTGGGGATGAGCGACAGCGAAATTCGCCGTCAGTT  >  NC_000913/398472‑398761
                                                                                                                                              |                                                                                                                                                   
cAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCa                                                                                                                                             <  1:101239/151‑1 (MQ=255)
     aGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAg                                                                                                                                        <  1:334316/151‑1 (MQ=255)
        cTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAATTATCCCCCCCGTTATAGCGCACCGATATAACGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGcc                                                                                                                                     >  2:217851/1‑151 (MQ=255)
          tCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGcc                                                                                                                                     <  1:530289/149‑1 (MQ=255)
           cAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGc                                                                                                                                      <  1:604009/147‑1 (MQ=255)
               cgccgcGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAgcggc                                                                                                                               <  2:900187/150‑1 (MQ=255)
               cgccgcGGCGGGTTGTGGTTTGGTACTTACCAATTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGGACGCCAGCCGGAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAgcgg                                                                                                                                >  1:566256/1‑149 (MQ=255)
                      gcggGTGGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCt                                                                                                                       <  2:274204/151‑1 (MQ=255)
                        gggTTGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTg                                                                                                                      <  1:298632/150‑1 (MQ=255)
                                  ttGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACg                                                                                                            <  1:19701/150‑1 (MQ=255)
                                   tGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACgg                                                                                                           <  1:104352/150‑1 (MQ=255)
                                           aCCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTaa                                                                                                   <  1:94275/150‑1 (MQ=255)
                                                   cTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTAc                                                                                           <  1:705802/150‑1 (MQ=255)
                                                    tGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTAc                                                                                           <  2:325848/149‑1 (MQ=255)
                                                     gAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGAc                                                                                        <  1:147232/151‑1 (MQ=255)
                                                       aTTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAg                                                                                      <  1:54084/151‑1 (MQ=255)
                                                       aTTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAg                                                                                      <  1:141746/151‑1 (MQ=255)
                                                                ccAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAAcc                                                                             >  2:388085/1‑151 (MQ=255)
                                                                  aGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCg                                                                           >  2:894848/1‑151 (MQ=255)
                                                                  aGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCg                                                                           >  1:16776/1‑151 (MQ=255)
                                                                    ttATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCgg                                                                          <  2:790536/150‑1 (MQ=255)
                                                                    ttATAGCGCACCGATATACCGTTGTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCgg                                                                          <  1:101714/150‑1 (MQ=255)
                                                                       taGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGaa                                                                       >  2:629233/1‑150 (MQ=255)
                                                                             aCCGATATACCGCTTTGCTGATTTTAACGCTGCCTGGCACCCCACCCGCAATGCCGCGTTTCAGAGCGCGGCCAGTAAGGCCAGCGCCGCGAAGCCGGCACTGGACGGCGATTTAATTCGCTACGACAGTAAAGAACCCGGGAAAAcc                                                                   >  2:29692/1‑148 (MQ=255)
                                                                                  tataCCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGc                                                           >  1:539469/1‑151 (MQ=255)
                                                                                   ataCCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGc                                                           >  1:174502/1‑150 (MQ=255)
                                                                                        gTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAAcgcg                                                     <  1:790875/151‑1 (MQ=255)
                                                                                          tttGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACgcgc                                                    >  1:857994/1‑150 (MQ=255)
                                                                                          tttGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACgcgc                                                    <  2:103581/150‑1 (MQ=255)
                                                                                                gATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTgg                                             >  1:199138/1‑151 (MQ=255)
                                                                                                 aTTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGc                                            >  1:865477/1‑151 (MQ=255)
                                                                                                    ttAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGc                                         >  1:365897/1‑151 (MQ=255)
                                                                                                     tAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGc                                         >  2:844382/1‑150 (MQ=255)
                                                                                                      aaCGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCa                                        >  2:598550/1‑150 (MQ=255)
                                                                                                        cGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCaaaa                                     <  1:852039/151‑1 (MQ=255)
                                                                                                        cGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCaaaa                                     <  1:795437/151‑1 (MQ=255)
                                                                                                           tggctggTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCAAAACTg                                  >  1:228267/1‑151 (MQ=255)
                                                                                                            ggctggTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCAAAACTg                                  <  2:491533/150‑1 (MQ=255)
                                                                                                                ggTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACGGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCAAAACTGGGGa                              <  1:162379/150‑1 (MQ=255)
                                                                                                                ggTACGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCAAAACTGGGGAt                             <  1:734364/151‑1 (MQ=255)
                                                                                                                   aCGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCAAAACTGGGGATg                            >  1:300875/1‑149 (MQ=255)
                                                                                                                   aCGCCAGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCAAAACTGGGGATg                            >  1:277388/1‑149 (MQ=255)
                                                                                                                        aGCCGTAATGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCAAAACTGGGGATGAGCg                        <  1:507390/148‑1 (MQ=255)
                                                                                                                              aaTGCCGCGTTTCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCAAAACTGGGGATGAGCGACAGCGaa                <  2:259485/150‑1 (MQ=255)
                                                                                                                                         tCAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCAAAACTGGGGATGAGCGACAGCGAAATTCGCCGTc      >  1:720488/1‑149 (MQ=255)
                                                                                                                                          cAGAGCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCAAAACTGGGGATGAGCGACAGCGAAATTCGCCGTCAGt   >  1:557322/1‑151 (MQ=255)
                                                                                                                                           agagCGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCAAAACTGGGGATGAGCGACAGCGAAATTCGCCGTCAGtt  >  2:192925/1‑151 (MQ=255)
                                                                                                                                              |                                                                                                                                                   
CAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAACGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCAAAACTGGGGATGAGCGACAGCGAAATTCGCCGTCAGTT  >  NC_000913/398472‑398761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: