Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091329,4860CA39.1% 113.3 / 35.3 69intergenic (+291/‑165)dapB/carAdihydrodipicolinate reductase/carbamoyl phosphate synthetase small subunit, glutamine amidotransferase
Reads supporting (aligned to +/- strand):  ref base C (31/11);  new base A (0/27);  total (31/38)
Fisher's exact test for biased strand distribution p-value = 1.54e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATT  >  NC_000913/29337‑29636
                                                                                                                                                      |                                                                                                                                                      
ttttGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCcac                                                                                                                                                        >  2:691764/1‑150 (MQ=255)
 tttGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCcaca                                                                                                                                                       <  2:106828/150‑1 (MQ=255)
 tttGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCcaca                                                                                                                                                       <  2:385569/150‑1 (MQ=255)
      tgttTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAaata                                                                                                                                                  >  2:701273/1‑150 (MQ=255)
           taagggaaaaTTTTAACATTTGGTGCGCTGTTGTCTGCTCGTGTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAAATGATCTTTTTGTCGCTTGATGCCTGTAAAACATGGATGAGCCGCAAAATAAtata                                                                                                                                             <  1:586521/144‑1 (MQ=255)
           tAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAAtata                                                                                                                                             <  2:1037395/150‑1 (MQ=255)
           tAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAAtata                                                                                                                                             <  2:1037090/150‑1 (MQ=255)
            aaTGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATaaa                                                                                                                                           <  2:415761/151‑1 (MQ=255)
                tAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATaaaaaa                                                                                                                                        <  1:18690/150‑1 (MQ=255)
                tAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAAt                                                                                                                                       >  2:1046868/1‑151 (MQ=255)
                 aaaTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATc                                                                                                                                      >  2:1027196/1‑151 (MQ=255)
                 aaaTTTTGACCATTTGGTCCACTTTTTTCTACTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATGATATaaaaaa                                                                                                                                        <  1:111321/149‑1 (MQ=255)
                  aaTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCGGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATcc                                                                                                                                     <  1:1117086/151‑1 (MQ=255)
                   aTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATccc                                                                                                                                    >  2:639749/1‑151 (MQ=255)
                        gACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCa                                                                                                                                <  2:247425/150‑1 (MQ=255)
                          ccATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCAtt                                                                                                                              >  2:185152/1‑150 (MQ=255)
                                   ccACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACtt                                                                                                                    >  1:173772/1‑151 (MQ=255)
                                      cTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACtttt                                                                                                                  >  2:365979/1‑150 (MQ=255)
                                           ttCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGcc                                                                                                            >  2:359128/1‑151 (MQ=255)
                                             cTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGccc                                                                                                           >  1:903024/1‑150 (MQ=255)
                                               gCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAATCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATCTAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCat                                                                                                         >  1:1071336/1‑150 (MQ=255)
                                               gCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCat                                                                                                         >  2:988091/1‑150 (MQ=255)
                                                cTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGATAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATCAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCatat                                                                                                       >  2:666032/1‑151 (MQ=255)
                                                 tcttttttATTTCATGCATTCTTCTTGCTGCGCAAGCGTTTTCAAGAAC‑AGTTTAGATGATTTTTTTGTCGTTTAATGCTTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCat                                                                                                         <  2:435722/145‑1 (MQ=255)
                                                   ttttttATTTCATAAATTTTTCTTGCTGCGCAATCTTTTTCCAAAAC‑AGTTAAGATAATTTTTTTTTCGTTTAATCCTTGAAAAACATGCTTGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCata                                                                                                        <  1:577225/146‑1 (MQ=255)
                                                   gTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtctc                                                                                                    >  1:903075/1‑151 (MQ=255)
                                                    tttttATTTCATGAAATCTTCTTGCTGCGCAAGTGTTTCCCAGAAC‑GGGTTAGATGTTTTTTTTGTCGTTAAATGCCTAAAAAACATGCATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtct                                                                                                     <  2:1099375/149‑1 (MQ=255)
                                                     ttttATTTCATCCAATCTTTTTGCTGCGCAAGCGTTTCCCAGAAC‑GGTTTAAATGATTTTTTTGTCGCTAAATGCCTTAAAAACATGCAGGACCCAAAAAAAAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                                   <  2:1054544/150‑1 (MQ=255)
                                                      tttATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtctc                                                                                                    >  1:581533/1‑148 (MQ=255)
                                                        tATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGa                                                                                                >  2:724555/1‑150 (MQ=255)
                                                               taaattcttctTGCCGCGCAAGCTTTTCACAAAAC‑AGTTTAAATTATTTTTTTGTCGTTTAAGGCCTAAAAAACATCAAGGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgccg                                                                                          <  1:628651/144‑1 (MQ=255)
                                                                    tcttctTGCTGCGCAAGCTTTTTCCAAAAC‑AGGTTAGATGATTTTTTTGTCGTTTAATGCCTGAAAAACATGAATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgccgc                                                                                         <  2:167449/145‑1 (MQ=255)
                                                                     cttcttGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGc                                                                                  >  1:280568/1‑151 (MQ=255)
                                                                       tcttGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                                 >  2:264514/1‑150 (MQ=255)
                                                                       tcttGCTGCGCAAGC‑TTTTCCAAAACGAGTTTAGATGATTTTTTTGTCGTTAAATGCCTAAAAAACAGGCAGGAGCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGttt                                                                                    <  2:131349/147‑1 (MQ=255)
                                                                           gctgcGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGaa                                                                             >  2:106752/1‑150 (MQ=255)
                                                                             tgcGCAAGCTTTTTCAAGAAG‑AGGTAAAATAATTTTTTTTTCGTTTAATCCCTTAAAAACATGCTTGGCCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGa                                                                              <  1:288061/147‑1 (MQ=255)
                                                                                 cAAGCTTTTTCCAGAAC‑AGGGTAGATGATCTTTTTGTCGCTTAATGCCTGTAAGACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGCTCGCCAGAAATtcg                                                                        >  1:497186/1‑149 (MQ=255)
                                                                                  aaGCGTTTTCCAGAAC‑AGGTTAGATGTTTTTTTTGTCGTTTAATGCCTGAAAAACAGGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtc                                                                      <  2:989244/150‑1 (MQ=255)
                                                                                  aaGCGTTTTCCAAAAC‑GGTTTAGATGTTTTTTTTGTCGCTTAATGCCTGAAAAACATGAATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgt                                                                       <  2:798690/149‑1 (MQ=255)
                                                                                  aaGCGTTTCCCAAACC‑AGGTTAGATGTTTTTTTTGTCCCTTAATGCCTAAAAAACATGCGTGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtc                                                                      <  2:660645/150‑1 (MQ=255)
                                                                                       ttttCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTa                                                                  >  1:766541/1‑149 (MQ=255)
                                                                                       ttttCCAAAAC‑AGTTTAGATGTTTTTTTTGTCCCTAAATCCCTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTa                                                                  <  2:818274/149‑1 (MQ=255)
                                                                                       ttttCAAGAAC‑AGTTTAATTTATATTTTTGTCTTTAAATCCCTTAAAAAATTGCATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGt                                                                   <  1:131779/148‑1 (MQ=255)
                                                                                       tttcCCAGAAC‑AGGTTAGATGATTTTTTTGTCGTTTATTGCTTGAAAAACAGGCATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTaa                                                                 <  2:464588/150‑1 (MQ=255)
                                                                                        tttCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAg                                                                >  2:200480/1‑150 (MQ=255)
                                                                                         ttCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGc                                                               >  2:449266/1‑150 (MQ=255)
                                                                                         tccaaGAAC‑AGTTTAGATGATTTTTTTGTCGCTTAATGCCTGAAAAACATGCATGAGCCAAAAAAAAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGc                                                               <  2:231382/146‑1 (MQ=255)
                                                                                             aaaaC‑AGTTTAAATGATTTTTTTGTCTCTTAATCCCTGTAAAACATGCATGACCCAAAAAAAAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGc                                                               <  1:419581/144‑1 (MQ=255)
                                                                                             aGAAC‑AGTTTAGATGTTTTTTTTGTCGTTTAATGCCTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAg                                                             <  2:594781/148‑1 (MQ=255)
                                                                                             aGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAtt                                                          >  2:357625/1‑151 (MQ=255)
                                                                                             aGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAtt                                                          >  2:642107/1‑151 (MQ=255)
                                                                                               aaC‑AGGTTAGATGTTTTTTTTGTCGTTTAATGCCTGAAAAACATCCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGa                                                            <  2:74954/147‑1 (MQ=255)
                                                                                                   aGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCAAATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCAt                                                     >  1:789628/1‑151 (MQ=255)
                                                                                                      ttAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTg                                                   >  1:1126842/1‑150 (MQ=255)
                                                                                                                tttttGTCGCTTAATGCTTAAAAAACATGCATGACCAAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtc                                          <  2:72490/149‑1 (MQ=255)
                                                                                                                tgtttGTCGTTTATTCCTTGAAAAACATGCATTACCAACAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtc                                          <  1:567845/147‑1 (MQ=255)
                                                                                                                 ttttttcaattAATCCTTGTAAAACATGCTAGCGCAACAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGt                                           <  1:146936/138‑1 (MQ=255)
                                                                                                                    tttCGCTAAATGCTTAAAAAACATGTAGGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTcatcat                                     <  2:418340/148‑1 (MQ=255)
                                                                                                                     gTCGTTTAATGCCTATAAAACATGCATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtg                                   <  2:1110358/151‑1 (MQ=255)
                                                                                                                          ttAATGACTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAAt                              >  1:469845/1‑151 (MQ=255)
                                                                                                                            attcccTGAAAAATATGAAGGACCCACAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAAt                              <  1:709528/145‑1 (MQ=255)
                                                                                                                              tgcataaaaaaTATGCATGTGCAAAAAAAAAAAAAAAAAAAGCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTTATTTACGTCATCATTGTGAATTaa                           <  1:13028/143‑1 (MQ=255)
                                                                                                                               gCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTa                            >  1:413207/1‑148 (MQ=255)
                                                                                                                               ccctaaaaaaCAGGCAAGACCAAAAAAAAAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTa                            <  1:357367/142‑1 (MQ=255)
                                                                                                                                 cTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATg                       >  2:281345/1‑151 (MQ=255)
                                                                                                                                     aaacaatgaatgaACCAAAAAAAAAATAAAAAAAACCCGCCAGTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCaaa                   <  1:1025189/146‑1 (MQ=255)
                                                                                                                                        aCATGCATGACCAAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaa                <  2:763328/151‑1 (MQ=255)
                                                                                                                                           tgcatgAGCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaaa               <  2:24626/149‑1 (MQ=255)
                                                                                                                                              ctgATCCACAAACTAATATAAAAAATCCAGCCCTTAAGTTGACTTTTAGCGCCAATATATCCAGAATGCCGCCGTTTGCAAGCAATTCTCCGTTACGCAGATTTGCATTGCTTTCCGTCATCCTTGTGAATGAATATGCAAATAAagtg            >  1:809417/2‑149 (MQ=255)
                                                                                                                                               tgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgag          >  1:907277/1‑150 (MQ=255)
                                                                                                                                                   ccAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaa                <  1:185099/140‑1 (MQ=255)
                                                                                                                                                     acaAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAatat   >  1:459601/1‑151 (MQ=255)
                                                                                                                                                      caAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATAtt  >  2:176531/1‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
TTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAAC‑AGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATT  >  NC_000913/29337‑29636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑