Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091329,4860CA39.1% 113.3 / 35.3 69intergenic (+291/‑165)dapB/carAdihydrodipicolinate reductase/carbamoyl phosphate synthetase small subunit, glutamine amidotransferase
Reads supporting (aligned to +/- strand):  ref base C (31/11);  new base A (0/27);  total (31/38)
Fisher's exact test for biased strand distribution p-value = 1.54e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATT  >  NC_000913/29337‑29636
                                                                                                                                                      |                                                                                                                                                      
ttttGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCcac                                                                                                                                                        >  2:691764/1‑150 (MQ=255)
 tttGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCcaca                                                                                                                                                       <  2:106828/150‑1 (MQ=255)
 tttGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCcaca                                                                                                                                                       <  2:385569/150‑1 (MQ=255)
      tgttTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAaata                                                                                                                                                  >  2:701273/1‑150 (MQ=255)
           taagggaaaaTTTTAACATTTGGTGCGCTGTTGTCTGCTCGTGTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAAATGATCTTTTTGTCGCTTGATGCCTGTAAAACATGGATGAGCCGCAAAATAAtata                                                                                                                                             <  1:586521/144‑1 (MQ=255)
           tAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAAtata                                                                                                                                             <  2:1037395/150‑1 (MQ=255)
           tAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAAtata                                                                                                                                             <  2:1037090/150‑1 (MQ=255)
            aaTGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATaaa                                                                                                                                           <  2:415761/151‑1 (MQ=255)
                tAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATaaaaaa                                                                                                                                        <  1:18690/150‑1 (MQ=255)
                tAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAAt                                                                                                                                       >  2:1046868/1‑151 (MQ=255)
                 aaaTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATc                                                                                                                                      >  2:1027196/1‑151 (MQ=255)
                 aaaTTTTGACCATTTGGTCCACTTTTTTCTACTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATGATATaaaaaa                                                                                                                                        <  1:111321/149‑1 (MQ=255)
                  aaTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCGGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATcc                                                                                                                                     <  1:1117086/151‑1 (MQ=255)
                   aTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATccc                                                                                                                                    >  2:639749/1‑151 (MQ=255)
                        gACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCa                                                                                                                                <  2:247425/150‑1 (MQ=255)
                          ccATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCAtt                                                                                                                              >  2:185152/1‑150 (MQ=255)
                                   ccACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACtt                                                                                                                    >  1:173772/1‑151 (MQ=255)
                                      cTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACtttt                                                                                                                  >  2:365979/1‑150 (MQ=255)
                                           ttCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGcc                                                                                                            >  2:359128/1‑151 (MQ=255)
                                             cTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGccc                                                                                                           >  1:903024/1‑150 (MQ=255)
                                               gCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAATCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATCTAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCat                                                                                                         >  1:1071336/1‑150 (MQ=255)
                                               gCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCat                                                                                                         >  2:988091/1‑150 (MQ=255)
                                                cTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGATAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATCAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCatat                                                                                                       >  2:666032/1‑151 (MQ=255)
                                                 tcttttttATTTCATGCATTCTTCTTGCTGCGCAAGCGTTTTCAAGAACAGTTTAGATGATTTTTTTGTCGTTTAATGCTTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCat                                                                                                         <  2:435722/145‑1 (MQ=255)
                                                   ttttttATTTCATAAATTTTTCTTGCTGCGCAATCTTTTTCCAAAACAGTTAAGATAATTTTTTTTTCGTTTAATCCTTGAAAAACATGCTTGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCata                                                                                                        <  1:577225/146‑1 (MQ=255)
                                                   gTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtctc                                                                                                    >  1:903075/1‑151 (MQ=255)
                                                    tttttATTTCATGAAATCTTCTTGCTGCGCAAGTGTTTCCCAGAACGGGTTAGATGTTTTTTTTGTCGTTAAATGCCTAAAAAACATGCATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtct                                                                                                     <  2:1099375/149‑1 (MQ=255)
                                                     ttttATTTCATCCAATCTTTTTGCTGCGCAAGCGTTTCCCAGAACGGTTTAAATGATTTTTTTGTCGCTAAATGCCTTAAAAACATGCAGGACCCAAAAAAAAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                                   <  2:1054544/150‑1 (MQ=255)
                                                      tttATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtctc                                                                                                    >  1:581533/1‑148 (MQ=255)
                                                        tATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGa                                                                                                >  2:724555/1‑150 (MQ=255)
                                                               taaattcttctTGCCGCGCAAGCTTTTCACAAAACAGTTTAAATTATTTTTTTGTCGTTTAAGGCCTAAAAAACATCAAGGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgccg                                                                                          <  1:628651/144‑1 (MQ=255)
                                                                    tcttctTGCTGCGCAAGCTTTTTCCAAAACAGGTTAGATGATTTTTTTGTCGTTTAATGCCTGAAAAACATGAATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgccgc                                                                                         <  2:167449/145‑1 (MQ=255)
                                                                     cttcttGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGc                                                                                  >  1:280568/1‑151 (MQ=255)
                                                                       tcttGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                                 >  2:264514/1‑150 (MQ=255)
                                                                       tcttGCTGCGCAAGCTTTTCCAAAACGAGTTTAGATGATTTTTTTGTCGTTAAATGCCTAAAAAACAGGCAGGAGCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGttt                                                                                    <  2:131349/147‑1 (MQ=255)
                                                                           gctgcGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGaa                                                                             >  2:106752/1‑150 (MQ=255)
                                                                             tgcGCAAGCTTTTTCAAGAAGAGGTAAAATAATTTTTTTTTCGTTTAATCCCTTAAAAACATGCTTGGCCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGa                                                                              <  1:288061/147‑1 (MQ=255)
                                                                                 cAAGCTTTTTCCAGAACAGGGTAGATGATCTTTTTGTCGCTTAATGCCTGTAAGACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGCTCGCCAGAAATtcg                                                                        >  1:497186/1‑149 (MQ=255)
                                                                                  aaGCGTTTTCCAGAACAGGTTAGATGTTTTTTTTGTCGTTTAATGCCTGAAAAACAGGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtc                                                                      <  2:989244/150‑1 (MQ=255)
                                                                                  aaGCGTTTTCCAAAACGGTTTAGATGTTTTTTTTGTCGCTTAATGCCTGAAAAACATGAATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgt                                                                       <  2:798690/149‑1 (MQ=255)
                                                                                  aaGCGTTTCCCAAACCAGGTTAGATGTTTTTTTTGTCCCTTAATGCCTAAAAAACATGCGTGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtc                                                                      <  2:660645/150‑1 (MQ=255)
                                                                                       ttttCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTa                                                                  >  1:766541/1‑149 (MQ=255)
                                                                                       ttttCCAAAACAGTTTAGATGTTTTTTTTGTCCCTAAATCCCTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTa                                                                  <  2:818274/149‑1 (MQ=255)
                                                                                       ttttCAAGAACAGTTTAATTTATATTTTTGTCTTTAAATCCCTTAAAAAATTGCATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGt                                                                   <  1:131779/148‑1 (MQ=255)
                                                                                       tttcCCAGAACAGGTTAGATGATTTTTTTGTCGTTTATTGCTTGAAAAACAGGCATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTaa                                                                 <  2:464588/150‑1 (MQ=255)
                                                                                        tttCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAg                                                                >  2:200480/1‑150 (MQ=255)
                                                                                         ttCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGc                                                               >  2:449266/1‑150 (MQ=255)
                                                                                         tccaaGAACAGTTTAGATGATTTTTTTGTCGCTTAATGCCTGAAAAACATGCATGAGCCAAAAAAAAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGc                                                               <  2:231382/146‑1 (MQ=255)
                                                                                             aaaaCAGTTTAAATGATTTTTTTGTCTCTTAATCCCTGTAAAACATGCATGACCCAAAAAAAAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGc                                                               <  1:419581/144‑1 (MQ=255)
                                                                                             aGAACAGTTTAGATGTTTTTTTTGTCGTTTAATGCCTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAg                                                             <  2:594781/148‑1 (MQ=255)
                                                                                             aGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAtt                                                          >  2:357625/1‑151 (MQ=255)
                                                                                             aGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAtt                                                          >  2:642107/1‑151 (MQ=255)
                                                                                               aaCAGGTTAGATGTTTTTTTTGTCGTTTAATGCCTGAAAAACATCCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGa                                                            <  2:74954/147‑1 (MQ=255)
                                                                                                   aGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCAAATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCAt                                                     >  1:789628/1‑151 (MQ=255)
                                                                                                      ttAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTg                                                   >  1:1126842/1‑150 (MQ=255)
                                                                                                                tttttGTCGCTTAATGCTTAAAAAACATGCATGACCAAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtc                                          <  2:72490/149‑1 (MQ=255)
                                                                                                                tgtttGTCGTTTATTCCTTGAAAAACATGCATTACCAACAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtc                                          <  1:567845/147‑1 (MQ=255)
                                                                                                                 ttttttcaattAATCCTTGTAAAACATGCTAGCGCAACAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGt                                           <  1:146936/138‑1 (MQ=255)
                                                                                                                    tttCGCTAAATGCTTAAAAAACATGTAGGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTcatcat                                     <  2:418340/148‑1 (MQ=255)
                                                                                                                     gTCGTTTAATGCCTATAAAACATGCATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtg                                   <  2:1110358/151‑1 (MQ=255)
                                                                                                                          ttAATGACTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAAt                              >  1:469845/1‑151 (MQ=255)
                                                                                                                            attcccTGAAAAATATGAAGGACCCACAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAAt                              <  1:709528/145‑1 (MQ=255)
                                                                                                                              tgcataaaaaaTATGCATGTGCAAAAAAAAAAAAAAAAAAAGCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTTATTTACGTCATCATTGTGAATTaa                           <  1:13028/143‑1 (MQ=255)
                                                                                                                               gCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTa                            >  1:413207/1‑148 (MQ=255)
                                                                                                                               ccctaaaaaaCAGGCAAGACCAAAAAAAAAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTa                            <  1:357367/142‑1 (MQ=255)
                                                                                                                                 cTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATg                       >  2:281345/1‑151 (MQ=255)
                                                                                                                                     aaacaatgaatgaACCAAAAAAAAAATAAAAAAAACCCGCCAGTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCaaa                   <  1:1025189/146‑1 (MQ=255)
                                                                                                                                        aCATGCATGACCAAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaa                <  2:763328/151‑1 (MQ=255)
                                                                                                                                           tgcatgAGCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaaa               <  2:24626/149‑1 (MQ=255)
                                                                                                                                              ctgATCCACAAACTAATATAAAAAATCCAGCCCTTAAGTTGACTTTTAGCGCCAATATATCCAGAATGCCGCCGTTTGCAAGCAATTCTCCGTTACGCAGATTTGCATTGCTTTCCGTCATCCTTGTGAATGAATATGCAAATAAagtg            >  1:809417/2‑149 (MQ=255)
                                                                                                                                               tgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgag          >  1:907277/1‑150 (MQ=255)
                                                                                                                                                   ccAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaa                <  1:185099/140‑1 (MQ=255)
                                                                                                                                                     acaAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAatat   >  1:459601/1‑151 (MQ=255)
                                                                                                                                                      caAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATAtt  >  2:176531/1‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
TTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATT  >  NC_000913/29337‑29636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: