Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,784,452 IS5 (–) +4 bp pseudogene (557‑560/1374 nt) ypjC ← pseudogene

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2784452 =0 (0.000)81 (0.890) 69/298 0.5 100% pseudogene (560/1374 nt) ypjC pseudogene
?NC_000913 3130146 = NA (NA)noncoding (1/1195 nt) IS5 repeat region
* ? NC_000913 = 27844550 (0.000)99 (1.090) 73/298 0.3 100% pseudogene (557/1374 nt) ypjC pseudogene
?NC_000913 = 3131340 NA (NA)noncoding (1195/1195 nt) IS5 repeat region

Only 100 of 181 total aligned reads displayed.

ACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTAGCGCATTCAAAAAACTGATCGGCATTATTTTTATTCGATAATTTTTTAGTTTCAGAAAACA  >  NC_000913/2784308‑2784605
                                                                                                                                                   |                                                                                                                                                      
 caagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATaa                                                                                                                                                     <  2:211550‑M1/7‑1 (MQ=255)
 caagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAac                                                                                                                                                    <  2:166882‑M1/8‑1 (MQ=255)
  ccccTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAgga                                                                                                                                                     >  2:82571‑M1/1‑146 (MQ=255)
    ccTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggt                                                                                                                                                 <  2:1175740‑M1/151‑8 (MQ=255)
        gAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcg                                                                                                                                              >  2:77130‑M1/1‑140 (MQ=255)
        gAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcg                                                                                                                                              <  1:1208866‑M1/150‑11 (MQ=255)
         tctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTAcgcg                                                                                                                                            <  2:650283‑M1/16‑1 (MQ=255)
            tCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaata                                                                                                                                          >  1:170368‑M1/1‑136 (MQ=255)
             cATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataa                                                                                                                                         <  1:792111‑M1/150‑16 (MQ=255)
              tttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGtac                                                                                                                                         >  1:1359792‑M1/131‑149 (MQ=255)
                tctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTactact                                                                                                                                     <  1:587107‑M1/23‑1 (MQ=255)
                 cacaAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggg                                                                                                                                    <  1:918695‑M1/151‑21 (MQ=255)
                 cacaAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcgg                                                                                                                                     <  2:741217‑M1/150‑20 (MQ=255)
                    gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAATAGAACACTACGCGTACTACTTgg                                                                                                                                  >  2:732459‑M1/125‑150 (MQ=255)
                    gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTg                                                                                                                                   <  1:201673‑M1/25‑1 (MQ=255)
                    gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGc                                                                                                                                 <  1:1059761‑M1/27‑1 (MQ=255)
                      aCGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaat                                                                                                                               <  2:1333147‑M1/151‑26 (MQ=255)
                        gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGTTTa                                                                                                                              <  2:351435‑M1/30‑1 (MQ=255)
                        gacggcgcttactgctgaattcactgtcggcgaagggacgttgatgactcttgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggaggtgttcgcgccttccAAAACAACACTACGCTTTCTACTTGGCTTaa                                                                                                                             >  2:631783‑M1/121‑151 (MQ=255)
                          atattttttttcttGAATATCTATGGGGTGTTCCTTTGCCTCTCACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcgggaaaattct                                                                                                                            >  2:923888‑M1/4‑122 (MQ=255)
                              gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAAc                                                                                                                       >  2:54187‑M1/115‑151 (MQ=255)
                              gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAAc                                                                                                                       >  2:318073‑M1/115‑151 (MQ=255)
                              gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAAc                                                                                                                       >  1:886693‑M1/115‑151 (MQ=255)
                               ttttttCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcg                                                                                                                       <  1:903185‑M1/150‑34 (MQ=255)
                               cttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAAcc                                                                                                                      <  2:750971‑M1/38‑1 (MQ=255)
                                  tttCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctg                                                                                                                   >  2:970595‑M1/1‑114 (MQ=255)
                                  tttCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctg                                                                                                                   >  1:272085‑M1/1‑114 (MQ=255)
                                  actgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAAc                                                                                                                   >  2:647785‑M1/111‑151 (MQ=255)
                                   ttCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctg                                                                                                                   <  1:100087‑M1/150‑38 (MQ=255)
                                    tCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgac                                                                                                                 >  1:489043‑M1/1‑112 (MQ=255)
                                    tCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgac                                                                                                                 >  2:1078594‑M1/1‑112 (MQ=255)
                                     gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACa                                                                                                                  >  2:262834‑M1/108‑149 (MQ=255)
                                       tGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgac                                                                                                                 <  2:282737‑M1/148‑40 (MQ=255)
                                        gAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcag                                                                                                             <  2:299846‑M1/151‑44 (MQ=255)
                                        gAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactca                                                                                                              <  2:681084‑M1/150‑43 (MQ=255)
                                         aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGaaaa                                                                                                            >  1:1159376‑M1/104‑151 (MQ=255)
                                         aaTATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagt                                                                                                            >  2:322832‑M1/1‑107 (MQ=255)
                                          atatCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtc                                                                                                           >  2:1013613‑M1/1‑106 (MQ=255)
                                             tCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt                                                                                                        >  1:619951‑M1/1‑103 (MQ=255)
                                                   cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACttttt                                                                                                   >  2:837818‑M1/94‑150 (MQ=255)
                                                   cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACttttt                                                                                                   >  1:1312585‑M1/94‑150 (MQ=255)
                                                    ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCt                                                                                                 >  1:114738‑M1/93‑151 (MQ=255)
                                                      cgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTta                                                                                               >  2:371347‑M1/91‑151 (MQ=255)
                                                        aaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTtata                                                                                             >  2:705737‑M1/89‑151 (MQ=255)
                                                         tCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcat                                                                                            >  1:486979‑M1/1‑91 (MQ=255)
                                                         tCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttca                                                                                             >  2:846220‑M1/1‑91 (MQ=255)
                                                           gtaagttgaagactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcaaggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTAtatt                                                                                           >  1:688574‑M1/86‑150 (MQ=255)
                                                             aagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATc                                                                                        >  1:915838‑M1/84‑151 (MQ=255)
                                                              tGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                        <  1:1414839‑M1/150‑65 (MQ=255)
                                                              agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCg                                                                                       >  1:198515‑M1/83‑151 (MQ=255)
                                                              agttgatgactcatgatgaaccctgtgctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCg                                                                                       >  2:935105‑M1/83‑151 (MQ=255)
                                                               gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGa                                                                                      >  1:565457‑M1/82‑151 (MQ=255)
                                                                   atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAg                                                                                  >  1:978380‑M1/78‑151 (MQ=255)
                                                                        tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCt                                                                             <  1:1068532‑M1/79‑1 (MQ=255)
                                                                        aaaGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt                                                                             >  1:275121‑M1/1‑76 (MQ=255)
                                                                        aaaGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt                                                                             >  1:466651‑M1/1‑76 (MQ=255)
                                                                         catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTc                                                                              >  1:191156‑M1/72‑149 (MQ=255)
                                                                          aGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt                                                                           <  1:939154‑M1/151‑78 (MQ=255)
                                                                           tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTAt                                                                           <  1:1151162‑M1/81‑1 (MQ=255)
                                                                               gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCAtt                                                                      <  2:1328310‑M1/86‑1 (MQ=255)
                                                                               gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCAt                                                                       >  1:73937‑M1/66‑150 (MQ=255)
                                                                                aaTCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg                                                                     >  2:184145‑M1/1‑68 (MQ=255)
                                                                                  ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCt                                                                   >  2:656373‑M1/63‑151 (MQ=255)
                                                                                    tcATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaa                                                                  >  2:1178959‑M1/1‑64 (MQ=255)
                                                                                     cATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                                    <  2:326679‑M1/147‑85 (MQ=255)
                                                                                      gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACTCTACGCGTACTTCTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTa                                                               >  1:650480‑M1/59‑151 (MQ=255)
                                                                                      gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCtttt                                                                <  2:620737‑M1/92‑1 (MQ=255)
                                                                                      aTCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg                                                               >  1:779647‑M1/1‑62 (MQ=255)
                                                                                          tatggctacagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTAgcgc                                                           <  2:1339984‑M1/97‑1 (MQ=255)
                                                                                          aTTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt                                                           <  2:429069‑M1/151‑94 (MQ=255)
                                                                                            tttGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg                                                          >  2:1297121‑M1/1‑56 (MQ=255)
                                                                                             ttGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg                                                          >  1:46187‑M1/1‑55 (MQ=255)
                                                                                             ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTTGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTAGCGCAt                                                         >  2:1405405‑M1/52‑150 (MQ=255)
                                                                                              gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTAGCGCATTc                                                       <  1:906791‑M1/101‑1 (MQ=255)
                                                                                                 ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTAGCGCATTCaa                                                     <  2:233234‑M1/103‑1 (MQ=255)
                                                                                                     atgacaaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTAGCGCATTCAAAAAAc                                                <  1:827287‑M1/108‑1 (MQ=255)
                                                                                                      tatGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctat                                               >  1:964253‑M1/1‑46 (MQ=255)
                                                                                                      tatGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctat                                               >  2:1103485‑M1/1‑46 (MQ=255)
                                                                                                          aaacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTAGCGCATTCAAAAAACTGATc                                           <  2:1443714‑M1/113‑1 (MQ=255)
                                                                                                           aacatgatctcatatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTAGCGCATTCAAAAAACTGATCg                                          >  1:149903‑M1/38‑151 (MQ=255)
                                                                                                           aTTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                             >  1:263361‑M1/1‑41 (MQ=255)
                                                                                                                  gATTCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttc                                   <  2:1030054‑M1/151‑118 (MQ=255)
                                                                                                                    ttCCATACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt                                 >  2:801725‑M1/1‑32 (MQ=255)
                                                                                                                     catatcagggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTAGCGCATTCAAAAAACTGATCGGCATTAttt                                 >  1:516748‑M1/28‑150 (MQ=255)
                                                                                                                        aTACAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc                             >  1:1289971‑M1/1‑28 (MQ=255)
                                                                                                                           cAGACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatt                          <  1:1111476‑M1/151‑127 (MQ=255)
                                                                                                                             ggacttgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTAGCGCATTCAAAAAACTGATCGGCATTATTTTTATTCGAt                        >  2:476773‑M1/20‑151 (MQ=255)
                                                                                                                             gACATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt                         >  2:787156‑M1/1‑23 (MQ=255)
                                                                                                                              aCATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa                       <  1:1282835‑M1/151‑130 (MQ=255)
                                                                                                                               cATTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggtgaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaag                      <  2:1133652‑M1/151‑131 (MQ=255)
                                                                                                                                cttgttagcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCACCATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTAGCGCATTCAATAAACTGATCGGCATTATTTTTATTCGATAAt                     <  2:554413‑M1/135‑1 (MQ=255)
                                                                                                                                aTTTGGCGGCGTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagg                     <  1:1093917‑M1/151‑132 (MQ=255)
                                                                                                                                  tgttcgcaccttccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTAGCGCATTCAAAAAACTGATCGGCATTATTTTTATTCGATAAttt                   <  2:174039‑M1/137‑1 (MQ=255)
                                                                                                                                      cggcgTTTCTAAAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttat               >  1:1182604‑M1/1‑14 (MQ=255)
                                                                                                                                             tccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTAGCGCATTCAAAAAACTGATCGGCATTATTTTTATTCGATAATTTTTTAGTTTc          >  1:402895‑M1/4‑149 (MQ=255)
                                                                                                                                              ccAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTAGCGCATTCAAAAAACTGATCGGCATTATTTTTATTCGATAATTTTTTAGTTTc          <  2:1229956‑M1/146‑1 (MQ=255)
                                                                                                                                                  aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttta   <  2:272021‑M1/151‑150 (MQ=255)
                                                                                                                                                  aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    <  2:137215‑M1/150‑149 (MQ=255)
                                                                                                                                                   aTAACACTACGCGTACTTCTTATCTTAAGTAAACCAACATGAAAATCACTTTTGCTTATATTCTCGAAAAGGTTCTATTCATTTCTTTTAGCTCATTCAAAAAACGGAGCGGCATTATTTTTATTCGATAATTTTTTAGTTTCAGAAAacc  <  2:60070/151‑2 (MQ=255)
                                                                                                                                                   aTAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATTAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTAGCGCATTCAAAAAACTGATCGGCATTATTTTTATTCGATAATTTTTTAGTTTCAGAAAac   >  1:818426/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                      
ACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATTTTGTTTTCATATGAATTACGTGATTCCATACAGACATTTGGCGGCGTTTCTAAAATAACACTACGCGTACTACTTGGCTTAAGTAAACCAACATGAAAATCACTTTTTCTTATATTATCGAAAAGGTTCTATTCATTTCTTTTAGCGCATTCAAAAAACTGATCGGCATTATTTTTATTCGATAATTTTTTAGTTTCAGAAAACA  >  NC_000913/2784308‑2784605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.