| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,228,275 | 0 | T | C | 42.5% | 94.8 / 14.3 | 73 | pseudogene (335/1287 nt) | mdtQ | pseudogene; putative channel/filament proteins |
| Reads supporting (aligned to +/- strand): ref base T (21/21); new base C (9/22); total (30/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.39e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCC > NC_000913/2228126‑2228419 | gCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCt < 1:156122/150‑1 (MQ=255) ttttCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCg < 1:736339/148‑1 (MQ=255) ttttCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGGTTTCTCGCG‑TTTCCCCGCCCCGG‑CTTT‑TAACGGACCCAAGCGGGGAGGAAACTcccccc > 1:1012037/1‑151 (MQ=255) tttCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCCGCAATTGGC‑GGGTTTGCTCGCG‑GTTCGCCCCCCGTG‑CTTT‑TACCCTACCCCAGCGGGCAGTAAACTCcccc > 2:448819/1‑149 (MQ=255) tttCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGGTTGTTCGCG‑TTCCGACGCCCGGG‑CTTTAAACCTAACCCAGG‑GGGCAGTAAACTCCGccc > 2:359501/1‑150 (MQ=255) ttCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCg < 1:1120649/150‑1 (MQ=255) tgctgcAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCttt < 1:960596/150‑1 (MQ=255) ctgcAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCCGCAATTGGCGGGGTTTCCCCCGG‑TTCCCCGCCCCGGG‑TTTT‑AACC‑TGCCCCGGGGGGCAGTAAACCCCCCCCCAtttttt > 2:1218362/1‑148 (MQ=255) ctgcAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGGTTGCTCGCG‑TTCCGCCCCCCGTG‑CTTT‑TACCGTAACCAAGCCGGCAGTAAACCCCGCCCGATTCTTTtcc > 1:528289/1‑151 (MQ=255) ctgcAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GCGTTTGTCTGCG‑GTTCCCCCCCCCTG‑CTTT‑TACCGCACCCACGCGGGGCGCAAACTCCCCCCCGTTCTTTtcc > 2:602768/1‑151 (MQ=255) gcAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCa < 2:461332/151‑1 (MQ=255) cAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGGTTGCTCGCG‑GTCCGCCCCCCGTG‑CTTT‑AACCCCACCCCGGCGGGGAGTAACCCCCGCCCCGTTCTTTcccc > 1:1264067/1‑149 (MQ=255) aaGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGGTTTCTCGCG‑TTCCGCCGCCCCTG‑CTTT‑AAACGTACCCCGGCGGGGAGTAAACTCCGCCCGGTTTTTTtccc > 1:911125/1‑148 (MQ=255) aaGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGGTTGCCCGCG‑TTTCCCCCCCCCTG‑CTTT‑AACCGTACCCCGGCGGGCAGTAACCTCCCCCCGATTCTTTtccc > 1:848893/1‑148 (MQ=255) aCCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGGTTTCTCGCG‑TTCCGCCCCCCCTG‑CTTT‑AAACCGACCCCGGCGGGGCGTAACCTCCGCCCGATTCTTTCCCCCGat > 1:416028/1‑149 (MQ=255) tgtTTGCCGCCGCCTGGGTTTGCCACGCCCAGTACAGGCGGCCTCAGCTGCCAGCCATCAATTGGC‑CGGTTTGCTCCCG‑TTCCGCCGCCTGTG‑CTTG‑AACCGTACCCAGGCGGTCAGTAACCTCCGCCCGATTCTTTCCCCAGATATc < 2:971847/148‑1 (MQ=255) ttAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGAt < 2:1018704/150‑1 (MQ=255) ttAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑GTCCGCCGCCCCGG‑CTTT‑AAACGTACCCAGGCGGGGAGGAAACCCCCCCCCGGTCTTTCCCCAGa > 2:246648/1‑141 (MQ=255) aaCGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGGTTTCTCCCG‑GTCCCCCCCCCCTGCCTTT‑AACCG‑ACCCCAGCGGGCCGGAAACCCCCCCCCCTTCTTTTCCCCAAAATCGAGAAGcc > 1:1052309/1‑151 (MQ=255) gccgccTGGGTTTGCCACTTCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGAAGTAACCTCCGCCCGATTCTTGCCCCAGATATCGAGATGCCTGc < 2:312935/151‑1 (MQ=255) gccgccTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGc < 2:114578/151‑1 (MQ=255) ccgccTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGcc < 1:1301760/151‑1 (MQ=255) cgccTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGccc < 1:245585/151‑1 (MQ=255) cgccTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGccc < 2:493048/151‑1 (MQ=255) gccTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCccg < 1:187696/151‑1 (MQ=255) gggTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCccgccg < 1:246705/150‑1 (MQ=255) gggTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCccgcc < 1:720260/149‑1 (MQ=255) gggTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCccgcc < 2:225974/149‑1 (MQ=255) tGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGGTTTCTCGCGTTTCCCCCCCCCGT‑‑CTTT‑TACCGTACCCCGGCGGGCAGGAAACCCCCCCCCGTTCTTTTCCCCGATATCCCAGTGCCAGCCCGCCGCTaaac > 2:952281/1‑149 (MQ=255) cccttCCCAGTACGGGGGGGCTCCGCGCCCGGCCACCTAGGGGG‑GGGTTGGCCCGCG‑TCCCGCCGCCCGTG‑CTTT‑ACCCGTCCCCGGGCGGGCAGTACCCCCCCCCCGATTCTTCCCCCAGATATGGGGATGCCAGCCCGCCGTTAAg < 2:893423/144‑1 (MQ=255) ccACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCT‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGAAGTACCCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGc < 1:776956/149‑1 (MQ=255) tCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑GTCCGCCGCCCGTG‑CTTT‑AACCCTACCCAGGCGGGCAGTAACCTCCGCCCCATTCTTTCCCCCGATATCGAGATGCCAGCCCGCCGTTAAGCCaaaa > 1:414431/1‑150 (MQ=255) cccAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTTCTCGCC‑TTCCCCCGCCCGTG‑CCTT‑TACCCTAACCCAGCGGGCCGGAACCCCCACCCGGTTTTTTTCCCCCATAACCAGATTCCCGACCCCCGTTAAGCCcaaa > 2:453063/1‑149 (MQ=255) cccAGTACAGGCGGGCTACGCTGCCAGCCAGAAATTGGC‑GGGTTTGCTCGCG‑TCCCGCCGCCCGTG‑TTTT‑ACCCTTCCCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAg < 1:1355195/150‑1 (MQ=255) aGTACAGTCGGGCTCCTGCGCTGGCAAGAAATTGGC‑GGTTTGGCGCGCT‑TCCCCCCCCCTGTA‑TTTC‑AGCCGCCCCCAGGGGGGAAGAACCCCCCCCCATATTCTTCCCCCAGATATGAAGATTCCGGCCCGCCGTTAAGCCAAAAGTAcc < 2:530685/151‑1 (MQ=255) tACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGGTTGCTCGCG‑TTCCGCCCCCCCGG‑CCTT‑TACCCGACCCCGGGGGGGAGTAAACCCCGCCCCATTTTTTCCCCCGCAATCGCGATGGCCCCCCCCCCGTAAGCCcaaaagaac > 2:628169/1‑144 (MQ=255) aGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTACGCCGCCCGTG‑CTTT‑AACCGTACCCCGGCGGGCAGGAACCCCCGCCCGCTTTCTTCCCCAGATACCGAGATGCCAACCCGCCGCTAAGCCacaa > 2:1074414/1‑141 (MQ=255) ggcctccGCTGCCACCCAGCAATTGGC‑GGTTTTGCTCGCG‑TCCCCCCCCCCTTG‑CTTT‑AACCGTCCCCAGGCGGGAAGTACCCCCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTg < 2:1219172/140‑1 (MQ=255) cGCTGCCAGCCAGCAATTGGC‑GGTTTTGCTCGCG‑TTCCGCCGCCCGTG‑TTTT‑ACCCGTACCCAGGCGGGCAGTACCCCCCGCCCGATCCTTCCCCCAGATATCGAGATGCCACCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACg < 1:260715/150‑1 (MQ=255) tGCCAGCCGGCATTGGGG‑GGGTTTGCTCGCG‑TGCCGCCGCCCGTG‑CTTT‑ACCCGTCCCCGGGCGGGAGGTACCCCCCGCCCGATTCTTTCCCCAGATGTCGAGATCCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCAc < 2:528115/146‑1 (MQ=255) ccagccagCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTACCCCCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGcc < 1:1010925/149‑1 (MQ=255) cagcAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTc > 1:277285/1‑148 (MQ=255) cAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCCGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAATACCGTTGGTGTACCACGGGCCGGGCGTAcc > 2:1098734/1‑150 (MQ=255) acaTTGGC‑GGGTTTGTTCGCG‑TGGCGCCACACGTT‑CTTT‑AACCGTACCGGTGCGGCGAATTTTCTCCGCCCGATTCTGTCCCCTTGTCTCGGTTTCGCCGTCCGCCGTTAACCCAAAAGTACCGTTGGTGTACCGCGCGCCGGTCGTa < 2:501255/146‑1 (MQ=255) ggC‑GGTTTTGCGCGCG‑TCCCCCCGCCGGTT‑CTTT‑ACCCGTCCCCGGGGGGGCGGTACCCCCCGCCCGTTTCTTCCCCCAGATGTCGAGAGGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTAcc < 2:1286528/145‑1 (MQ=255) gggtgTTTGCCCGCG‑TCCCGCCGCCCGTG‑CTTT‑ACCCGCCCCGAGGCGGAAATTACCCCCCCCCCGATTTTTCCCCCAGTGCTCGAGAGGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGcc < 2:635796/147‑1 (MQ=255) ttcgatCGCG‑TCCCCCCGCCTGTG‑CTTA‑AACCGCCCCCAGGCGGAGATTACCCCCCCCCCGATTCTTCCCCAAGATACCGAGATCCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGAt < 1:834855/145‑1 (MQ=255) tccccgcg‑TTCCGCCGCCCGTG‑TTTT‑AACCGTACCCAGGCGGGCAGTACCCCCCCCCCGATTCTTTCCCCAGATATCGAGAGGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCg < 2:941200/146‑1 (MQ=255) cccgcg‑TCCCCCCGCCCGTC‑TTTT‑ACCGGTCCCCGGGGGGGAAGAACCCCCCGCCGGTTTTTTTCCCCAGAAACCGAGAGGCCGGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCg < 2:849953/146‑1 (MQ=255) cgcccttcccgcccCCCTGG‑TTTT‑ACCCGTCCCCGGGGGGGCATAACCCCCCCCCCGTTTCTTCCCCCAGATTTCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTc < 2:303800/143‑1 (MQ=255) cgcg‑TTCCCCCCCCCGTG‑TTTT‑AACCGTCCCCAGGCGGGCAGTACCCCCCGCCCGATTCTTCCCCCAAATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTc < 1:1379116/149‑1 (MQ=255) gcg‑TTCCGCCGCCCGTG‑TTTT‑ACCCGTCCCCAGGCGGGAAGTACCCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCag < 1:1020602/150‑1 (MQ=255) cgcttccccccccccGTG‑TTTT‑AACCCAACCCGGGCGGGCGGTCCCCTCCGCACGTTTTTTCCCCAAGAAATCGAGATGCCACCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTc < 2:1050219/137‑1 (MQ=255) cg‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCag > 2:611405/1‑149 (MQ=255) cgccCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGc > 1:590007/1‑151 (MQ=255) gcacGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGcc > 2:157714/4‑151 (MQ=255) cccGTG‑CTTT‑ACCCTTACCCAGGCGGACAGTACCCCCCGCCCGATTCTTCCCCCAGATATCGAGAGGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGccc < 1:1074729/151‑1 (MQ=255) cccGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGCTCAGAGCAAACGGccc > 1:1000803/1‑151 (MQ=255) ccGTG‑TTTT‑ACCCGTCCCCAGGCGGGCAGTACCCCCCGCCCGATTCTTCCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGcccc < 1:8395/151‑1 (MQ=255) ccGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGcccc > 1:94052/1‑151 (MQ=255) cGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGcccc > 1:972345/1‑150 (MQ=255) tG‑CTTT‑AACCGTCCCCGGGCGGGCAGTACCCCCCCCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCa < 1:1159449/149‑1 (MQ=255) ttt‑CACCGTCCCCAGGCGGGCAGTACCCCCCGCCCGTTTCTTTCCCCAGATATCGAGAGGCCGGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTaa < 2:129249/150‑1 (MQ=255) tt‑ACCCGTCCCCAGGCGGGCAGTACCCTCCGCCCGATTCTTCCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTa < 1:459641/148‑1 (MQ=255) tt‑ACCCGTCCCCAGCCGGGCGGCACCCCCCGCCGGTTTCTTCCCCCAGATATCGATATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCa < 2:848638/145‑1 (MQ=255) acccGCACCCAGGGGGGTCCTACCCCCCGCCCGATTCTTCCCCCAGATATGGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGTGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGc < 2:363028/147‑1 (MQ=255) gTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTg > 1:681692/1‑151 (MQ=255) ccAGGCGGGGAGTACCCCCCGCCCGATTCTTCCCCCAGATATCGAGATCCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGa < 2:272450/151‑1 (MQ=255) ccAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCg > 1:1379882/1‑150 (MQ=255) aGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGAc > 2:326864/1‑150 (MQ=255) gggggCAGTACCCCCCGCCCGATTCTTCCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACAtt < 1:952564/149‑1 (MQ=255) gggCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACAtttt > 1:62131/1‑151 (MQ=255) gggAAGTACCCCCCGCCCGTTTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACAttt < 1:1009132/150‑1 (MQ=255) gTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGcc > 1:1323377/1‑151 (MQ=255) | GCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAATTGGC‑GGGTTTGCTCGCG‑TTCCGCCGCCCGTG‑CTTT‑AACCGTACCCAGGCGGGCAGTAACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCC > NC_000913/2228126‑2228419 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |