| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,261,055 | 0 | A | C | 44.8% | 136.4 / 20.3 | 87 | V455G (GTG→GGG) | tdcE | pyruvate formate‑lyase 4/2‑ketobutyrate formate‑lyase |
| Reads supporting (aligned to +/- strand): ref base A (41/7); new base C (0/39); total (41/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.49e-18 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTAGTGAATGATATTCAGCGCGCTGATGTACTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCTGTTGAAGTCAGTACGCATCAGATCGTCATTTT > NC_000913/3260907‑3261205 | gTAGTGAATGATATTCAGCGCGCTGATGTACTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCAcc > 1:1119/1‑151 (MQ=255) tAGTGAATGATATTCAGCGCGCTGATGTACTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCAcc‑c > 1:409766/1‑151 (MQ=255) aGTGAATGATATTCAGCGCGCTGATTTACTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCTTCCAcc‑cc < 2:931720/151‑1 (MQ=255) aGTGAATGATATTCAGCGCGCTGATGTACTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCAcc‑cc < 1:995624/151‑1 (MQ=255) tGAATGATATTCAGCGCGCTGATGTACTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑ccgc > 2:970038/1‑151 (MQ=255) gAATGATATTCAGCGCGCTGATGTACTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑ccgcc > 2:837283/1‑151 (MQ=255) aTGATATTCAGCGCGCTGATGTACTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGt > 2:1107872/1‑151 (MQ=255) gATATTCAGCGCGCTGATGTACTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGtt > 2:1079674/1‑150 (MQ=255) tCAGCGCGCTGATGTACTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTg > 1:1187573/1‑150 (MQ=255) aGCGCGCTGATGTACTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCg > 2:218325/1‑150 (MQ=255) aGCGCGCTGATGTACTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCg > 1:1404697/1‑150 (MQ=255) gcgcTGATGTACTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGt > 1:983334/1‑148 (MQ=255) gcTGATGTACTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGagc > 1:1213469/1‑151 (MQ=255) tACTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGCTAATTGCGTAGAGCAGCGtt > 2:97531/1‑150 (MQ=255) cTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTc > 1:663036/1‑151 (MQ=255) ccccGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGCCCTAAA‑TCTTCAGCTTCTCGCCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGc < 1:150764/148‑1 (MQ=255) cGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAgg > 2:530369/1‑151 (MQ=255) ccagccggACAATGAAGTGATCGAGTCTGCCCATCACTTTTTCGTTAACCAGCCCGTCTTCCCTCCGGGGTGTTGTTTCCGCCACGACCAGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAgg < 1:893310/149‑1 (MQ=255) cgtcctccccATGAGGTGACCGGGGTTGCCCATCGCTTTGCCGTAACCCAACCCGCCGTCCTTCAGCGGTGCTGTGTGCGGCCCGCCTGGAT‑TCTTCATCTCCT‑GTCCCCCGCCGCCGTTAAGTGCGTAGAGCAGCGTTTTCGCCAGGTTa < 2:430256/143‑1 (MQ=255) ctcttccgttctgTGATCGAGGCTGTCCACCCTTTTGTCGTAATCCAGCACGTCGTCCACCAGCGGTGCTTTTTTCGCCCCGCCCTGAA‑TCTTCAGCTTCTCGCCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAgc < 1:76717/138‑1 (MQ=255) cgtggccATGAAGTGAGCGGGGCTGCCCCTCCTTTTGTCGTAACCCGGCCCGCGGTCCACCGGCGGTGGTTTTTTCGCCCCGCCGTGAG‑TCGTCAGTTTCCCGTCCCCG‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAgc < 2:789851/145‑1 (MQ=255) ccagTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCCCGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGCCCTGAA‑TCTTCAGCTTCTCGCCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAgc < 1:394621/150‑1 (MQ=255) ccagTCCATGAAGTGATCGAGGCTCTCCCTCCCTTTGTCGTACTCCACCACGGCGTCCACCAGCGGTGCTTTTTGCGGCCCGACCTGAA‑TCTTCAGCTTTCCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAgcg < 2:547066/151‑1 (MQ=255) ccagTCCATGAAGTGACCGAGGCTGTCCATCCCTTTGTCGTAACCCAGCACGTCGCCCATCAGCGGTGCTTTTTTCGGCCCGACCTAAA‑TCTTCAGCTTCTCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTa < 1:394549/148‑1 (MQ=255) ccagTCCAGGAATGGATCGAGTCTGCCCTTCTTTTTGTCGAACCCCAGCGCTTCGTCCACCAGGGTTGCTGTTTTCGGCCCGCCCTGAA‑TCTTCAGTTTCCCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTa < 2:644786/148‑1 (MQ=255) cagTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAgcgc > 1:495826/1‑151 (MQ=255) ccATGAAGTGATCGGGGCTGTCCATCTTTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTCCGGCCCGACCTGAT‑TTTTCAGCTTCTCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGt < 1:951605/149‑1 (MQ=255) aaGTGATCGGGGCTCTCCATCTCTTTGTCGTAACCCGGCCCGTCGTCCATCAGCGGTGTTGTTTTCGCCCCGCCCTTAA‑TCTTCAGCTTTTCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCa < 1:1166564/150‑1 (MQ=255) aaGTGATCGAGGCTGTCCATCCCTTTGTCGTAATCCAGCACGTCGTCCATCAGGGGTGCTTTTTTCGGCCCGCCCTGAA‑TCTTCAGCTTCTCGCCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCAc < 1:195707/148‑1 (MQ=255) ggaagcgggacgttCCATCGTTTTGTCGGACTCCACGCCGCCGCCCCTCAGGGGTGGGTTTGTCGGCCCGCCTGGAA‑GCTCCTTCTCCGCGCCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTGAGCGCGTGCGCCCAAg < 2:79734/138‑1 (MQ=255) gTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAgc > 2:76703/1‑138 (MQ=255) gagcGAGGCTGTCCATCCCTTTGTCGTAACCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTAAA‑TCTTCAGCTTCTCGCCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGaa < 1:1049326/148‑1 (MQ=255) gATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGa > 2:1422174/1‑150 (MQ=255) gATCGAGGCTGTCAATCACTTTGTCATAATCCACCTCGTCGTCCATCAGCGTTGCTTTTTTCGCCCCGACCTAAA‑TCTTCAGCTTCTCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAg < 1:412770/149‑1 (MQ=255) aTCGAGGCTGTCCATCACTCTGACGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTACAGCAGCGTTTTCGCCCGGCTAGCGCGCGCACCAAAGAAc > 2:1084564/1‑151 (MQ=255) ggggCTGTCCATCCCTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACt < 1:422820/147‑1 (MQ=255) gAGGCTGTCCATCTCTTTGTCGTAACCCAGCACGTCGTCCATCAGCGGTGTTTTTTTCGGCCCGCCCTGAA‑TCTTCAGCTTCTCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTg < 1:1030678/150‑1 (MQ=255) aGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGc > 1:1293248/1‑150 (MQ=255) ggCTGTCCTTCCTTTTGTCGTAACCCACCCCGTCGTCCCTCAGCGGTGCTTTTTGCGCCCCGCCCTGAA‑TCTGCGGCTTCTCGCCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACt < 1:463957/147‑1 (MQ=255) ggCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCAt > 2:311006/1‑151 (MQ=255) gCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCAtt > 1:855248/1‑151 (MQ=255) cTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCAttt > 1:321734/1‑151 (MQ=255) cTGCCCATCATTTTGTCGTAACCCAGCCCGTCGTCCATCGGCGGTGCTGTTTTCGCCCGGACCGTAT‑TCTTCAGCTTCGCGCCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCAt < 2:1119/149‑1 (MQ=255) tGTCCACCTCTTTGTCGTAATCCGGCCCGTCGCCCCCCGGGGGTGCTTTTTGCGGCCCGCCTTGAT‑TCTTCATCTTCTCGCCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCAtt < 2:213336/149‑1 (MQ=255) tCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCt > 2:987927/1‑151 (MQ=255) cATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCtt > 2:744122/1‑150 (MQ=255) aTCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTa > 2:701714/1‑150 (MQ=255) cACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTAcc > 1:562172/1‑150 (MQ=255) tCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCAcc > 2:15854/1‑150 (MQ=255) cGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCAt > 1:1288277/1‑151 (MQ=255) gaacccaccgcctcgccCATGAGGGTTCCTGTTTCCGCCCCGACATAAT‑CCTGAAGTTCCTAGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAGAGAACTGCATTTGCTTACCAATCACCATTg < 2:45540/139‑1 (MQ=255) aaacccaccaCTTCGCCCATCAGGGGTGCTGTTTTCGCCCCG‑CCTGAATTCTCCAGCTTCTCGCCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCAt < 2:623324/145‑1 (MQ=255) agtCCAGCGCGTCCCCCACCCTCGGTGCTTTTTGCTGCCCGACCTGAA‑TCTTCAGCTTCTCTCCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTgg < 2:1012339/149‑1 (MQ=255) aTCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTggg > 1:744659/1‑151 (MQ=255) cccAGCCCGTCGTCCATCAGCGTTCCTTTTTTCGCCCCGACCTGAA‑TCTCCATTTTCTCGCCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTggg < 2:452315/149‑1 (MQ=255) ccAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGc > 2:1099989/1‑150 (MQ=255) cAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTg > 2:514078/1‑151 (MQ=255) gCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGAc > 1:472083/1‑151 (MQ=255) cgtcgtCCATCAGCGGTGTTTTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACgca < 1:1423105/151‑1 (MQ=255) tcccccATCGGCGGTGTTGTTTTCGCCCCGACCTGAT‑TCTTCGTCTTCTCTTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACgca < 2:566870/145‑1 (MQ=255) ccATCGGCGGTGTTGTTTCCGCCCCGACCTAAA‑TCTTCTGCTTCTCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACgcagca < 2:572247/148‑1 (MQ=255) aTCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCa > 2:256706/1‑150 (MQ=255) gCGGTGCTGTTTCCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATcgc < 1:1079990/151‑1 (MQ=255) ggTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATcg < 1:610449/148‑1 (MQ=255) ggTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGt > 2:129715/1‑151 (MQ=255) tgttGTTTTCGGCCCGACCTAAA‑TCTTCAGCTTCTCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTa < 1:982774/147‑1 (MQ=255) tGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAAtcg > 1:28222/1‑151 (MQ=255) ttttCGGCCCGACCTGAA‑TCTTCAGCTTCTCGCCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAAtcg < 1:204103/149‑1 (MQ=255) tttcCGGCCCGACCTGAA‑TCTTCAGCTCCTCGCCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAAtcgt < 1:1087425/150‑1 (MQ=255) ttgcggcccggccTGAA‑TCTTCAGCTTCTCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAAtcgtc < 2:835627/147‑1 (MQ=255) ttCGGCCCGCCCTGAA‑TCTTCAGCTTCTCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAAtcgtcg < 1:397059/150‑1 (MQ=255) ttCGCCCCGACCTGAA‑TCTTCAGCTTCTCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAAtcgtcg < 1:1037256/150‑1 (MQ=255) cGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCTg > 1:233570/1‑151 (MQ=255) ggCCCGCCCTGAA‑TCTTCAGCTTCTCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCt < 1:530544/149‑1 (MQ=255) ggCCCGCCATGAA‑TTTTCTTCTTCCCTTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCTg < 2:1038129/150‑1 (MQ=255) gCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCTGtt > 1:587178/1‑151 (MQ=255) cccGACCTGAA‑TCTTCAGCTTCTCGCCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCTGtt < 1:837533/150‑1 (MQ=255) ccGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCTGTTg > 2:933636/1‑150 (MQ=255) cagactttactCTTCACCTTCGCGCCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCTGTTg < 2:178454/140‑1 (MQ=255) cTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCTGTTGAAGTc > 1:479092/1‑150 (MQ=255) aatttgcAGCTTCCCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCTGTTGAAGTc < 2:1023734/141‑1 (MQ=255) cTTCGGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTATAGCAGCGTTTTCGCCAGGGTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCGTTGGGCTGACGCAGCAGGCAATCGCGTAATCATCGCTGTTGAAGTCAGTACGc > 2:1390020/1‑151 (MQ=255) cAGCTTCTCGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCTGTTGAAGTCAGTACg < 1:72050/147‑1 (MQ=255) aGCTTCTCGCCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCTGTTGAAGTCAGTACg < 1:878331/146‑1 (MQ=255) ttCTCGCCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCTGTTGAAGTCAGTACGCa < 2:364569/145‑1 (MQ=255) cGTCCCCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCTGTTGAAGTCAGTACGCATCAGATCg < 1:311509/149‑1 (MQ=255) ccACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCTGTTGAAGTCAGTACGCATCAGATCGTCAtt > 1:479778/1‑151 (MQ=255) aCC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCTGTTGAAGTCAGTACGCATCAGATCGTCAtttt > 2:1020575/1‑151 (MQ=255) | GTAGTGAATGATATTCAGCGCGCTGATGTACTGCACCGCCAGCCAGTCCATGAAGTGATCGAGGCTGTCCATCACTTTGTCGTAATCCAGCACGTCGTCCATCAGCGGTGCTGTTTTCGGCCCGACCTGAA‑TCTTCAGCTTCTCGTCCACC‑CCGCCGTTAATTGCGTAGAGCAGCGTTTTCGCCAGGTTAGCGCGTGCACCAAAGAACTGCATTTGCTTACCAATCACCATTGGGCTGACGCAGCAGGCAATCGCGTAATCGTCGCTGTTGAAGTCAGTACGCATCAGATCGTCATTTT > NC_000913/3260907‑3261205 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |