| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,443,277 | 0 | A | C | 39.4% | 113.3 / 26.9 | 72 | V274G (GTA→GGA) | secY | preprotein translocase membrane subunit |
| Reads supporting (aligned to +/- strand): ref base A (39/4); new base C (0/28); total (39/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.79e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAAATACTAATACTG > NC_000913/3443128‑3443427 | cAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑Ac < 2:190510/151‑1 (MQ=255)cAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑Ac > 1:376161/1‑151 (MQ=255) cGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑Accccc < 1:502319/151‑1 (MQ=255) agagTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCat > 1:1207439/1‑151 (MQ=255) agagTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCat > 1:1157646/1‑151 (MQ=255) tAACACATAACGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCACCCAGT‑ACCGCCCCCGAACCATGACGCGATGGCCGCCGGGATCAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCAATAtt > 2:1187159/1‑150 (MQ=255) aTAAAGCGGTTGGGCAGGCTGTAAATACAGTGAAATTGTTGTAAGCAAGTTCCAACCAGT‑ACAGAAACCGAAACATGACGCGATGGTCGAAGGGAACAGAATAATACTGGAAGAGAAGATTGCCGGGATT‑ACCCATGCAATATTTAAttt > 2:113718/1‑150 (MQ=255) tAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTc > 1:423456/1‑150 (MQ=255) aGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCg > 2:696684/1‑151 (MQ=255) aGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCg > 2:570361/1‑151 (MQ=255) cGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCgg > 1:140204/1‑150 (MQ=255) cGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGt > 1:1199346/1‑151 (MQ=255) ggTTGCCCAGGCTAAAAATACAGCAAAATTGTTGTCACCCATTCCCAACCTGC‑CCCCCCCCCAACCCATGACGGGATGGTCCCCGGGAACAAAATAATCCTGGAGGCGAAGATTGCGGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGt < 1:883981/150‑1 (MQ=255) tGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAAt > 1:1371416/1‑151 (MQ=255) ccggggttaaaaaTCCAGCAAATTTGTTGTCAGCCATTCCCAACCAGT‑CCCCCCCCCAAACCATGCCGGGAGGGTCGCGGGGAAAAAAATAATACTGGAAGAGAAGATTGCGGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAAtgt < 1:1346068/141‑1 (MQ=255) cccAGGCTGAAAAAACGGCGAAATTTTTGTCGGCCAGTCCCAAACAGT‑CCCGCCCCCGAACCATGACGCGAGGCTCGCCGGAAACAAAATAATACTGGAAGCGAAGATTGCCGGGATC‑ACCCCCGCCATATTCACTTTCAGCGGTAAAt < 2:922509/149‑1 (MQ=255) ccgggctaaaaaTACAGAAAATTTTTTGTCAGCCA‑TTCCAAACCGTCCCCGCCCCCAAACCGTGGCGGTGTGGGCGCGGGGAAAAAAAAAATACTGGAAGCGAAGATGGCGGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAAtgtg < 1:1369906/142‑1 (MQ=255) ccAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAAtgtg > 1:730886/1‑151 (MQ=255) cAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAAtgtgt > 1:1298232/1‑151 (MQ=255) ggatGCCAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ATCGCCCCCGAACCATGAGGCGATGGTCCCCGTGAACAGAATAATACTGTAACCGAAGATTGCCGGGATT‑ACCCCCGCTATATTCACTTTCAGCGGTAAAtgt > 2:406961/4‑147 (MQ=255) ggCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGc > 2:1289327/1‑151 (MQ=255) gCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGct > 1:863837/1‑151 (MQ=255) tGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGctct > 1:295641/1‑151 (MQ=255) aaaTACAGAGAATTTTTTGTCGGCGAGTACCAACAAGT‑CCCGCCCCCGACCAAGGCGGCGAGGGCCGCGGGAAAAAAAATAATACTGGAAGCGAAGATTGCGGGGTTT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCtg < 2:1362361/149‑1 (MQ=255) aaTCCAGCAAAATTTTTGTCACCCAGTTCCAACCAGT‑CCCCCCCCCGACCCAGGCCGCGATGGTCGCCGGAAAAAAAAAAATCCGGGAAGCGAAGTTTGCCGGAATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTgc < 1:1083367/151‑1 (MQ=255) gcaaaaTTGTTGTCAGCCAGTCCAACCCAGT‑CCCGCCCCCGAACCATGACGCGATGGTCGCGGGAAACAAAATAATACTGGAAGCGAAGTTGGCCGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTgcag < 1:784432/144‑1 (MQ=255) aattttttgtCAGCCGTTCCCAACCAGT‑CCCCCCCCCGACCAATGCCGCGATGGTCCCGGGAAACAGAATAATACTGAAAGCAAAGATTGCGGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTgcag < 1:1180183/138‑1 (MQ=255) aaTTGTTGTCAGCCATTCCCAACCGGT‑CCCCCCCCCGAACCATGCCGGGATGGTCGCGGGGAACAAAATAATACTGGAAGCGAAGTTTGCCGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGaca < 1:615010/151‑1 (MQ=255) aTTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGaca > 2:995421/1‑150 (MQ=255) tggtcaccacgTTCCAACAATT‑CCCTCCCCCACACCGGGACTCGTGGGTCGCCGAGACCAAAATTATACTGGAAGCTAAGATGGCCGGGTTT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACacgac < 2:1073059/140‑1 (MQ=255) tgtCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACacgac > 2:1051237/1‑149 (MQ=255) ccAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGCCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGc > 2:608524/1‑151 (MQ=255) aGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTg > 1:781107/1‑151 (MQ=255) aGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTg > 1:1362374/1‑151 (MQ=255) aCCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTc > 2:217063/1‑151 (MQ=255) ccAGT‑CCCCCCCCCGAACAAGGCCGGGATGTTCGCGGGGAAAAGAAAAATCCTGGAAGAGAAGATTGCCGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGtt < 1:630770/148‑1 (MQ=255) cccccccccAACCCAGGCCGGGATGGCCGCCGGAAAAAGAATAATCCTGGAAGCGAAGATTGCGGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTcgcg < 2:973677/144‑1 (MQ=255) ccGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGt > 2:267245/1‑151 (MQ=255) gCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGttt > 1:1257404/1‑151 (MQ=255) ccccGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTAc > 1:68448/1‑151 (MQ=255) aacaaggACGCGATGGTCGCCGGAAACAAAATAATACTGGAAGCGAAGATTGCCGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACaa < 1:102612/145‑1 (MQ=255) aaCCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACcaca > 2:797891/1‑150 (MQ=255) cATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATgc > 2:1184551/1‑151 (MQ=255) cgggATGGTCGCCGGGAACAAAATAAACCTGGAAGGGAATATTGCCGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATgcg < 2:1146850/144‑1 (MQ=255) gcgAGGGTCGCCGGAAAAAAAATAATACGGAAAGCGAAGTTTGCGGGGTTT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATgcgg < 1:821165/147‑1 (MQ=255) gATGTTCGCCGGAAAAAAATAAATACTGGAAGCGAAAATTGCGGGGTTT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGa < 2:549135/151‑1 (MQ=255) aTGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGAc > 1:301550/1‑151 (MQ=255) ggccgcgGGGAAAAAAATAATGCGGGAGGAGAAGA‑TGGCGGGATTCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATgcggcc < 2:1166492/141‑2 (MQ=255) cggggAAAAAAATAATACTGGAAGCGAATATTGCGGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCt < 2:696364/148‑1 (MQ=255) cgggaaaCAAAAAAATACGGGAAGCGAAGATTGCCGGGATC‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCAc < 1:678797/142‑1 (MQ=255) ccGGAAAAAAAAAAATACGGGAAGCAAATATCGCCGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTc < 1:888670/151‑1 (MQ=255) ggaaaCAAAATAATACTGGAGGCGAAGATTG‑CGGGATTCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTcaa < 1:73441/148‑1 (MQ=255) aaaCAAAATAATACTGGAAGCGAAGATTGCGGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTcaac < 1:1146149/149‑1 (MQ=255) aaaaaaataatGCTGGAAGCGAATTTTGCGGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTcaa < 1:1051546/143‑1 (MQ=255) aaCAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTcaaca > 2:642870/1‑150 (MQ=255) aaaaaataatCCTGGAAGCAAATATTGCCGGTATC‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACaaa < 1:448188/147‑1 (MQ=255) aCAAAATAATACGGGAAGCGAAGATTGCCGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACaaa < 1:1125799/151‑1 (MQ=255) aataatACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATac > 1:95135/1‑150 (MQ=255) aataatACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATac > 2:222149/1‑150 (MQ=255) aaaaacagggaaaGCGAAGTTTCCCGGTATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAAt < 1:1517/137‑1 (MQ=255) taataCTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATacaac > 1:1131616/1‑151 (MQ=255) tagtGGAAGCGAGGATTGCGGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATAcaacaa < 1:890283/147‑1 (MQ=255) taCTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATAcaacaa > 2:457501/1‑150 (MQ=255) aCTGGAAGCAAAGATTGCGGGGATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACaaa < 1:19634/150‑1 (MQ=255) gaaaGCGATGATGGCCGGTTAT‑GCGCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGaa < 2:1016540/148‑1 (MQ=255) aggCGAAGATGCCCGGTATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACg < 2:919626/148‑1 (MQ=255) aGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTc > 1:915596/1‑151 (MQ=255) gAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCATCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACt > 1:681654/1‑151 (MQ=255) aagagtgaagggATA‑ACCCCCGCCATATTCACTTTCAGCGGTACATGTGTGCTCTGTGCAGAATAGACACGACGACCTTGCTGAAGTTCCGAGTAGTTTACCACAATGCGGCGATGACGACGCCCAACAAATACAACAAAGAACGTCACt > 2:53875/10‑150 (MQ=255) ccGGTATT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGc < 1:571971/145‑1 (MQ=255) ccGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaatac > 2:381679/1‑151 (MQ=255) aTT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaatac > 2:264969/1‑146 (MQ=255) aCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAAATACTAATACTg > 1:434642/1‑151 (MQ=255) | CAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAGT‑ACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGGATT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAAATACTAATACTG > NC_000913/3443128‑3443427 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |