Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,378,8020AC44.3% 117.4 / 16.7 70V48G (GTA→GGA) ampCpenicillin‑binding protein; beta‑lactamase, intrinsically weak
Reads supporting (aligned to +/- strand):  ref base A (34/5);  new base C (0/31);  total (34/36)
Fisher's exact test for biased strand distribution p-value = 5.36e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CCCCTCGAGCAATAGCGTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGTTTTGAACATAGGGTCT  >  NC_000913/4378653‑4378951
                                                                                                                                                          |                                                                                                                                                      
ccccTCGAGCAATAGCGTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTac                                                                                                                                                       >  2:13892/1‑151 (MQ=255)
     cGAGCAATAGCGTCGCCCCCAAGCACGCCAGTAAATGTTTTGCTGACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTaccgcc                                                                                                                                                   <  1:663291/150‑1 (MQ=255)
      gAGCAATAGCGTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTaccgccac                                                                                                                                                >  2:836599/1‑151 (MQ=255)
       aGCAATAGCGTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTaccgccacc                                                                                                                                               >  1:827489/1‑151 (MQ=255)
        gCAATAGCGTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTaccgccaccg                                                                                                                                              >  1:451812/1‑151 (MQ=255)
          aaTAGCGTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTaccgccaccgc                                                                                                                                             <  2:1032267/150‑1 (MQ=255)
           aTAGCTTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTAccgccaccgcca                                                                                                                                           <  1:520817/151‑1 (MQ=255)
               cGTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTCCCCTGATAAATTACCGCCACCGCCATAc                                                                                                                                        <  1:562599/150‑1 (MQ=255)
                    ccaccaAGCACGCCAGTAAATGTTTTGCTGACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCggg                                                                                                                                   >  2:847471/1‑150 (MQ=255)
                     caccaAGCACGCCAGTAAATGTTTTGCTGACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGAt                                                                                                                                 >  2:1065069/1‑151 (MQ=255)
                            caggctaGTAATTGTTTTGCGTACCAACCCTAACACAAACAATGTTTGTTGTGTGCGGGTTTTTTTTTTGGCTGTGCCGCCAGGCCCCCGGGTAAATTAATAGTGTTGCCCGTAAAAATTCCCCGCCGCCGCCATACCCGGGATCTTttg                                                                                                                           <  1:836101/144‑1 (MQ=255)
                             aCGCCAGTAAATGTTTTGCTGACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTttgtt                                                                                                                         >  1:1023513/1‑151 (MQ=255)
                              cGCCAGTAAATGTTTTGCTGACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTttgttg                                                                                                                        >  1:478062/1‑151 (MQ=255)
                                ccAGTAATTTTTTTGCTGCCCGACCCAAACTCAAACAACGTTTGGTGTGTGGCGGGCTTCTTTTTGGCGATCTCCGCATCGCCCCAGAAAAAGAAATAGTGTTTCCCATAATAATTCCCCGCCACCGCCATACCCGGGATCTTttg                                                                                                                           <  1:524869/146‑1 (MQ=255)
                                 cAGTGAATTTTTTGCCTTCCCAACCCTACCTCAAACACGTTTTGTTGTGGGAGTGGTTTTTTTTTGGCGTTCCCCGCATAGCCCCAGTAAAATTAAGAGTGTTTACCTTAATAATTTCCCGCCACCGCCATACCCGGGATCTTTTGTTGc                                                                                                                       <  1:757087/150‑1 (MQ=255)
                                  agaaaaTTTTTTGCTAACGTACCCTAACAAAAAAACCTTTTGTTGTGGGGGGGCTTTCTTTTTGGCGATGCCCGCATACCCCGAGGAAATGTAATAAGTTTTTCCATGAAAATTGCCCCCCCCCGCCATACCCGGGATCTTTTGTTGct                                                                                                                      <  2:827698/146‑1 (MQ=255)
                                  aGTAAATGTTTTGCTGACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGctct                                                                                                                    >  2:81793/1‑151 (MQ=255)
                                   gTAAATGTTTTGCTGACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGTTAAATTACCGCCACCGCCATACTCGGGATCTTTTGTTGctct                                                                                                                    >  1:214183/1‑150 (MQ=255)
                                     aatttttttgcgacccGAACCAAACTAAAACAGTTTTTGCTGTTTGCGGGGCTGTTTTTGGGGGATGCCCGCATACCCCAAGAAAAAGTAAAAGGTTTTCCCTTAATAAATTCCCCCCCCCGCCATACCCGGGATCTTTTGTTGct                                                                                                                      <  2:1140091/132‑1 (MQ=255)
                                                 gACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCCCTATAAGCGGGGTAAt                                                                                                      >  1:223882/1‑150 (MQ=255)
                                                   ccGACCCTACCACAAACAAGTTTTGTTGTGTGGGGGGTTGTTTTTGGTCGATGCCCGCATACCCCCAGGAAAAGTAAAAATTTTTCCCTTGATAATTCCCCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTaa                                                                                                       <  1:528306/147‑1 (MQ=255)
                                                    cGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATtgtg                                                                                                  >  2:1048145/1‑151 (MQ=255)
                                                    cGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCACCAGGTAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGc                                                                                                 >  1:679439/1‑151 (MQ=255)
                                                      aaCCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCg                                                                                                >  2:870899/1‑151 (MQ=255)
                                                            aaccaaaaCACCGTTGGTGGTGTGGGGGGCGGTTTTTGGGGATTACCCGCAAAGCCGAAGATAAAGGAAAAGGGTTTCCCATAAAAATTCACCGCCTCCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATtgt                                                                                                   <  2:50065/138‑1 (MQ=255)
                                                                 aaaaaaCTTTTGCTGGGTGAGGGGCTGTTTTTTGGCGATCTCCGCATACCCCCAGGAAAAGAAATAAGGTTTACCCTAAAAATTCCCCCCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAat                                                                                       <  2:641269/150‑1 (MQ=255)
                                                                 aaaCAATGTTTGTTGTGTGACGGGCTGTTTTGTGGCGTGGTCCCCAGCCCCCGAGGAAAAGTAATAGGTTTTCCCTTAAAAATTCCCCCCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGc                                                                                            <  2:803510/145‑1 (MQ=255)
                                                                 aaaCAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGcaca                                                                                         >  2:364267/1‑148 (MQ=255)
                                                                   acaatGTTGGCTGTGTGGGGGGCTGCTTTTGGGCGATGCCCACACCGCCCGAGTAAAAGTAAGAAGTTTTCCCCTTATAAATCCCGGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATc                                                                                    <  1:666499/151‑1 (MQ=255)
                                                                         tttGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGAt                                                                              >  2:713910/1‑151 (MQ=255)
                                                                         tttGCTGTGGGCGGGGTTTTTTTTTGGGGATGCCCGAATGCCCCCAGAAAAAGAAAAAAGTTTTCCCTTAAAAAATGCCCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGa                                                                               <  1:765196/150‑1 (MQ=255)
                                                                            gttgtgtgCCGGGTTTTTTTTTGGCGATGTCCCCATCCCCCCAGGAAAATAAATAGGTTTTCCCTTAATAAATTCCCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATttg                                                                           <  1:1020138/149‑1 (MQ=255)
                                                                            gCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATttg                                                                           >  2:604239/1‑151 (MQ=255)
                                                                            gCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATttg                                                                           >  1:1015371/1‑151 (MQ=255)
                                                                                tgtgatgcgtttctTTTGGGTGATTGCCTCAGACCCCCATGTAAAATATTAGTTTTCCCATTATTAATTCACGCCACCCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTCATttg                                                                           <  1:1129771/135‑1 (MQ=255)
                                                                                    aCGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAgggg                                                                   >  1:1057088/1‑151 (MQ=255)
                                                                                      gggCTTTTTTTGGGCGATGCCCAAATACCCCCAGGAAAAGTAAAAGGTTTTCCCATAAAAAATTCCCCCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATttgt                                                                          <  2:480214/142‑1 (MQ=255)
                                                                                       ggCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAgggg                                                                   >  1:959329/1‑148 (MQ=255)
                                                                                         ttttttttgGGCGATGTCCACATACCCCCAGGTAAATAAATAGTTTTTCCCAGTATAATTTACCGCCTCCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGgcagc                                                               <  1:197594/146‑1 (MQ=255)
                                                                                           gctTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCaa                                                             >  2:927076/1‑150 (MQ=255)
                                                                                            tttttgGGGGATGCCCGCATCCCCCCAGAAAAAAAAATAAGTTTTCCCTTAAAAATTCCCCCCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCaaa                                                            <  1:17191/149‑1 (MQ=255)
                                                                                            tttttgGGCGATGCCCGCATACCCCCAGGAAAAGTAAAAAGTTTTCCCTTAAAAAATTCCCCCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGgcagc                                                               <  2:159638/146‑1 (MQ=255)
                                                                                             tttttGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAAtg                                                          >  1:93703/1‑151 (MQ=255)
                                                                                                  ggCGATGCCCGCATAGCCCCAGAAAAATTAATAAGTTTTCCCGTAATAAATCCCCCCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTgg                                                       <  2:363012/149‑1 (MQ=255)
                                                                                                     gATGCCCGCATACCCCCAGGAAAAGAAAAAAGTTTTCCCCTGATAATTTCCCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCaa                                                  <  2:599454/151‑1 (MQ=255)
                                                                                                     caagcacgatatccccccAGGTAAATTAAAAGGTTTCCCTTAAAAATTTCCCCCCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCa                                                   <  2:204240/137‑1 (MQ=255)
                                                                                                              cATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCgg                                           >  1:1085727/1‑150 (MQ=255)
                                                                                                               aTAGCCCGAGGAAAATAAAAAAGGTTTACCTTGAAAAATTCCCCCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCgg                                           <  2:704575/149‑1 (MQ=255)
                                                                                                               aTAGCCCCAGGTAAAGTAATAAGTTTTCCCTTAAAAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGta                                         <  2:79493/151‑1 (MQ=255)
                                                                                                                tAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGta                                         >  2:918991/1‑150 (MQ=255)
                                                                                                                tAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGta                                         >  2:1083582/1‑150 (MQ=255)
                                                                                                                 aGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGtaat                                       >  1:531630/1‑151 (MQ=255)
                                                                                                                   ccccAGGAAAAGAAATATGTTTTCCCTTAAAAATTTCCCCCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGtaa                                        <  1:695553/148‑1 (MQ=255)
                                                                                                                    cccAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGtaatta                                     >  1:458602/1‑150 (MQ=255)
                                                                                                                           aaataaatatGTTTTCCCCTAAAAAATCCCCCCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATtaata                                  <  2:990705/141‑1 (MQ=255)
                                                                                                                           aaaGTAATAATTTTTCCCTTAAAAAATCCCCCCCCCCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAg                                <  1:918734/148‑1 (MQ=255)
                                                                                                                           aaaGTAATAAGTTTTCCCCTAAAAAATCCCCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAgg                               <  2:1018918/149‑1 (MQ=255)
                                                                                                                           aaaGTAAAAGGTTTTCCCATTATAATTCCCCCCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATtaataa                                 <  2:827720/147‑1 (MQ=255)
                                                                                                                            aaGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAgg                               >  1:76855/1‑148 (MQ=255)
                                                                                                                            aaGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAgg                               >  1:958889/1‑148 (MQ=255)
                                                                                                                            aaGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGgcgc                            >  2:938761/1‑151 (MQ=255)
                                                                                                                            aaGAAATAAGTTTTCCCTTAAAAAATCCCCCCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGgc                              <  2:76867/149‑1 (MQ=255)
                                                                                                                               taataaGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATtaata                                  >  1:742755/1‑142 (MQ=255)
                                                                                                                               taataaGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGgcgc                            >  1:861014/1‑148 (MQ=255)
                                                                                                                                aataaGTTTTACCTTAAAAATTTCCCGCCACCGCCATACCCAGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCagag                        <  1:175705/151‑1 (MQ=255)
                                                                                                                                aataaGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCag                          >  2:661643/1‑149 (MQ=255)
                                                                                                                                 ataaGTTTTCCCCTAAAAATTCCCCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCagag                        <  1:817648/150‑1 (MQ=255)
                                                                                                                                 ataaGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGgcgc                            >  1:422149/1‑146 (MQ=255)
                                                                                                                                   aaGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGcg                      >  2:33670/1‑150 (MQ=255)
                                                                                                                                          ccccTAATAATTCCCCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGtttt               <  1:123748/149‑1 (MQ=255)
                                                                                                                                             ccttaaTAATTTCCCCCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGtt                 <  2:1100909/142‑1 (MQ=255)
                                                                                                                                                    aaaTTCCCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGTTTTGAACATAgg      <  2:451941/151‑1 (MQ=255)
                                                                                                                                                    aaaTTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGTTTTGAACATa        >  2:1111116/1‑149 (MQ=255)
                                                                                                                                                    aaaTTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGTTTTGAACATAgg      >  2:11075/1‑151 (MQ=255)
                                                                                                                                                     aaTTCCCGCCTCCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGTTTTGAACATAggg     <  1:1003443/151‑1 (MQ=255)
                                                                                                                                                        tACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGTTTTGAACATAGGGTCt  >  2:626917/1‑151 (MQ=255)
                                                                                                                                                          |                                                                                                                                                      
CCCCTCGAGCAATAGCGTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAACCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGTCCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCCTGATAAATTACCGCCACCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGTTTTGAACATAGGGTCT  >  NC_000913/4378653‑4378951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: