Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,378,8020AC44.3% 117.4 / 16.7 70V48G (GTA→GGA) ampCpenicillin‑binding protein; beta‑lactamase, intrinsically weak
Reads supporting (aligned to +/- strand):  ref base A (34/5);  new base C (0/31);  total (34/36)
Fisher's exact test for biased strand distribution p-value = 5.36e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CCCCTCGAGCAATAGCGTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGTTTTGAACATAGGGTCT  >  NC_000913/4378653‑4378951
                                                                                                                                                          |                                                                                                                                                      
ccccTCGAGCAATAGCGTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ac                                                                                                                                                       >  2:13892/1‑151 (MQ=255)
     cGAGCAATAGCGTCGCCCCCAAGCACGCCAGTAAATGTTTTGCTGACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑accgcc                                                                                                                                                   <  1:663291/150‑1 (MQ=255)
      gAGCAATAGCGTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑accgcca‑c                                                                                                                                                >  2:836599/1‑151 (MQ=255)
       aGCAATAGCGTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑accgcca‑cc                                                                                                                                               >  1:827489/1‑151 (MQ=255)
        gCAATAGCGTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑accgcca‑ccg                                                                                                                                              >  1:451812/1‑151 (MQ=255)
          aaTAGCGTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑accgcca‑ccgc                                                                                                                                             <  2:1032267/150‑1 (MQ=255)
           aTAGCTTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑Accgcca‑ccgcca                                                                                                                                           <  1:520817/151‑1 (MQ=255)
               cGTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTCCCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATAc                                                                                                                                        <  1:562599/150‑1 (MQ=255)
                    ccaccaAGCACGCCAGTAAATGTTTTGCTGACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCggg                                                                                                                                   >  2:847471/1‑150 (MQ=255)
                     caccaAGCACGCCAGTAAATGTTTTGCTGACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGAt                                                                                                                                 >  2:1065069/1‑151 (MQ=255)
                            caggctaGTAATTGTTTTGCGTACCAAC‑CCTAACACAAACAATGTTTGTTGTGTGCGGGTTTTTTTTTTGGCTGTGC‑CGCCAGGCCCCCGGGTAAATTAATAGTGTTGCCCG‑TA‑AAAATTC‑CCCGCCG‑CCGCCATACCCGGGATCTTttg                                                                                                                           <  1:836101/144‑1 (MQ=255)
                             aCGCCAGTAAATGTTTTGCTGACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTttgtt                                                                                                                         >  1:1023513/1‑151 (MQ=255)
                              cGCCAGTAAATGTTTTGCTGACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTttgttg                                                                                                                        >  1:478062/1‑151 (MQ=255)
                                ccAGTAATTTTTTTGCTGCCCGAC‑CCAAACTCAAACAACGTTTGGTGTGTGGCGGGCTTCTTTTTGGCGATCT‑CCGCATCGCCCCAGAAAAAGAAATAGTGTTTCCCA‑TA‑ATAATTC‑CCCGCCA‑CCGCCATACCCGGGATCTTttg                                                                                                                           <  1:524869/146‑1 (MQ=255)
                                 cAGTGAATTTTTTGCCTTCCCAACCCTACCTCAAACACGTTTTGTTGTGGGAGTGGTTTTTTTTTGGCGTTCC‑CCGCATAGCCCCAGTAAAATTAAGAGTGTTTACCT‑TA‑ATAATTT‑CCCGCCA‑CCGCCATACCCGGGATCTTTTGTTGc                                                                                                                       <  1:757087/150‑1 (MQ=255)
                                  agaaaaTTTTTTGCTAACGTAC‑CCTAACAAAAAAACCTTTTGTTGTGGGGGGGCTTTCTTTTTGGCGATGC‑CCGCATACCCCGAGGAAATGTAATAAGTTTTTCCA‑TG‑AAAATTG‑CCCCCCC‑CCGCCATACCCGGGATCTTTTGTTGct                                                                                                                      <  2:827698/146‑1 (MQ=255)
                                  aGTAAATGTTTTGCTGACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGctct                                                                                                                    >  2:81793/1‑151 (MQ=255)
                                   gTAAATGTTTTGCTGACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑TTAAATT‑ACCGCCA‑CCGCCATACTCGGGATCTTTTGTTGctct                                                                                                                    >  1:214183/1‑150 (MQ=255)
                                     aatttttttgcgacccGAA‑CCAAACTAAAACAGTTTTTGCTGTTTGCGGGGCTGTTTTTGGGGGATGC‑CCGCATACCCCAAGAAAAAGTAA‑AAGGTTTTCCCTTA‑ATAAATT‑CCCCCCC‑CCGCCATACCCGGGATCTTTTGTTGct                                                                                                                      <  2:1140091/132‑1 (MQ=255)
                                                 gACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCCCTATAAGCGGGGTAAt                                                                                                      >  1:223882/1‑150 (MQ=255)
                                                   ccGAC‑CCTACCACAAACAAGTTTTGTTGTGTGGGGGGTTGTTTTTGGTCGATGC‑CCGCATACCCCCAGGAAAAGTAAAAATTTTTCCCT‑TG‑ATAATTC‑CCCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTaa                                                                                                       <  1:528306/147‑1 (MQ=255)
                                                    cGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATtgtg                                                                                                  >  2:1048145/1‑151 (MQ=255)
                                                    cGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCACCAGGT‑AAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGc                                                                                                 >  1:679439/1‑151 (MQ=255)
                                                      aa‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCg                                                                                                >  2:870899/1‑151 (MQ=255)
                                                            aaccaaaaCACCGTTGGTGGTGTGGGGGGC‑GGTTTTTGGGGATTACCCGCAAAGCCGAAGATAAAGGAAAAGGGTTTCCCA‑TA‑AAAATTC‑ACCGCCT‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATtgt                                                                                                   <  2:50065/138‑1 (MQ=255)
                                                                 aaaaaaCTTTTGCTGGGTGAGGGGCTGTTTTTTGGCGATCT‑CCGCATACCCCCAGGAAAAGAAATAAGGTTTACCC‑TA‑AAAATTC‑CCCCCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAat                                                                                       <  2:641269/150‑1 (MQ=255)
                                                                 aaaCAATGTTTGTTGTGTGACGGGCTGTTTTGTGGCGTGGT‑CCCCAGCCCCCGAGGAAAAGTAAT‑AGGTTTTCCC‑TT‑AAAAATTCCCCCCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGc                                                                                            <  2:803510/145‑1 (MQ=255)
                                                                 aaaCAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGcaca                                                                                         >  2:364267/1‑148 (MQ=255)
                                                                   acaatGTTGGCTGTGTGGGGGGCTGCTTTTGGGCGATGC‑CCACACCGCCCGAGTAAAAGTAAGAAGTTTTCCCC‑TT‑ATAAATC‑CCGGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATc                                                                                    <  1:666499/151‑1 (MQ=255)
                                                                         tttGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGAt                                                                              >  2:713910/1‑151 (MQ=255)
                                                                         tttGCTGTGGGCGGGGTTTTTTTTTGGGGATGC‑CCGAATGCCCCCAGAAAAAGAAAAAAGTTTTCCCT‑TA‑AAAAATG‑CCCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGa                                                                               <  1:765196/150‑1 (MQ=255)
                                                                            gttgtgtgCCGGGTTTTTTTTTGGCGATGT‑CCCCATCCCCCCAGGAAAATAAATAGGTTTTCCCT‑TA‑ATAAATT‑CCCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATttg                                                                           <  1:1020138/149‑1 (MQ=255)
                                                                            gCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATttg                                                                           >  2:604239/1‑151 (MQ=255)
                                                                            gCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATttg                                                                           >  1:1015371/1‑151 (MQ=255)
                                                                                tgtgatgcgtttctTTTGGGTGATTG‑CCTCAGACCCCCATGTAAAAT‑ATTAGTTTTCCCA‑TT‑ATTAATT‑CACGCCACCCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTCATttg                                                                           <  1:1129771/135‑1 (MQ=255)
                                                                                    aCGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAgggg                                                                   >  1:1057088/1‑151 (MQ=255)
                                                                                      gggCTTTTTTTGGGCGATGC‑CCAAATACCCCCAGGAAAAGTAA‑AAGGTTTTCCCATA‑AAAAATT‑CCCCCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATttgt                                                                          <  2:480214/142‑1 (MQ=255)
                                                                                       ggCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAgggg                                                                   >  1:959329/1‑148 (MQ=255)
                                                                                         ttttttttgGGCGATGT‑CCACATACCCCCAGGTAAA‑TAAATAGTTTTTCCC‑AGTATAATTT‑ACCGCCT‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGgcagc                                                               <  1:197594/146‑1 (MQ=255)
                                                                                           gctTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCaa                                                             >  2:927076/1‑150 (MQ=255)
                                                                                            tttttgGGGGATGC‑CCGCATCCCCCCAGAAAAAAAAATAA‑GTTTTCCC‑TT‑AAAAATTCCCCCCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCaaa                                                            <  1:17191/149‑1 (MQ=255)
                                                                                            tttttgGGCGATGC‑CCGCATACCCCCAGGAAAAGTAAAAAGTTTTCCCT‑TA‑AAAAATT‑CCCCCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGgcagc                                                               <  2:159638/146‑1 (MQ=255)
                                                                                             tttttGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAAtg                                                          >  1:93703/1‑151 (MQ=255)
                                                                                                  ggCGATGC‑CCGCATAGCCCCAGAAAAATTAATAAGTTTTCCCG‑TA‑ATAAATC‑CCCCCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTgg                                                       <  2:363012/149‑1 (MQ=255)
                                                                                                     gATGC‑CCGCATACCCCCAGGAAAAGAAAAAAGTTTTCCCC‑TG‑ATAATTT‑CCCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCaa                                                  <  2:599454/151‑1 (MQ=255)
                                                                                                     caagcacgatatccccccAGGTAAATTAA‑AAGGTTTCCCT‑TA‑AAAATTTCCCCCCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCa                                                   <  2:204240/137‑1 (MQ=255)
                                                                                                              cATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCgg                                           >  1:1085727/1‑150 (MQ=255)
                                                                                                               aTAGCCCGAGGAAAATAAAAAAGGTTTACCT‑TG‑AAAAATT‑CCCCCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCgg                                           <  2:704575/149‑1 (MQ=255)
                                                                                                               aTAGCCCCAGGTAAAGTAATAAGTTTTCCCT‑TA‑AAAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGta                                         <  2:79493/151‑1 (MQ=255)
                                                                                                                tAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGta                                         >  2:918991/1‑150 (MQ=255)
                                                                                                                tAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGta                                         >  2:1083582/1‑150 (MQ=255)
                                                                                                                 aGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGtaat                                       >  1:531630/1‑151 (MQ=255)
                                                                                                                   ccccAGGAAAAGAAATATGTTTTCCCT‑TA‑AAAATTT‑CCCCCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGtaa                                        <  1:695553/148‑1 (MQ=255)
                                                                                                                    cccAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGtaatta                                     >  1:458602/1‑150 (MQ=255)
                                                                                                                           aaataaatatGTTTTCCCC‑TA‑AAAAATC‑CCCCCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATtaata                                  <  2:990705/141‑1 (MQ=255)
                                                                                                                           aaaGTAATAATTTTTCCCT‑TA‑AAAAATC‑CCCCCCC‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAg                                <  1:918734/148‑1 (MQ=255)
                                                                                                                           aaaGTAATAAGTTTTCCCC‑TA‑AAAAATC‑CCCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAgg                               <  2:1018918/149‑1 (MQ=255)
                                                                                                                           aaaGTAA‑AAGGTTTTCCCATT‑ATAATTC‑CCCCCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATtaataa                                 <  2:827720/147‑1 (MQ=255)
                                                                                                                            aaGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAgg                               >  1:76855/1‑148 (MQ=255)
                                                                                                                            aaGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAgg                               >  1:958889/1‑148 (MQ=255)
                                                                                                                            aaGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGgcgc                            >  2:938761/1‑151 (MQ=255)
                                                                                                                            aaGAAATAAGTTTTCCCT‑TA‑AAAAATC‑CCCCCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGgc                              <  2:76867/149‑1 (MQ=255)
                                                                                                                               taataaGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATtaata                                  >  1:742755/1‑142 (MQ=255)
                                                                                                                               taataaGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGgcgc                            >  1:861014/1‑148 (MQ=255)
                                                                                                                                aataaGTTTTACCT‑TA‑AAAATTT‑CCCGCCA‑CCGCCATACCCAGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCagag                        <  1:175705/151‑1 (MQ=255)
                                                                                                                                aataaGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCag                          >  2:661643/1‑149 (MQ=255)
                                                                                                                                 ataaGTTTTCCCC‑TA‑AAAATTC‑CCCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCagag                        <  1:817648/150‑1 (MQ=255)
                                                                                                                                 ataaGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGgcgc                            >  1:422149/1‑146 (MQ=255)
                                                                                                                                   aaGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGcg                      >  2:33670/1‑150 (MQ=255)
                                                                                                                                          cccc‑TA‑ATAATTC‑CCCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGtttt               <  1:123748/149‑1 (MQ=255)
                                                                                                                                             ccttaaTAATTT‑CCCCCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGtt                 <  2:1100909/142‑1 (MQ=255)
                                                                                                                                                    aaaTT‑CCCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGTTTTGAACATAgg      <  2:451941/151‑1 (MQ=255)
                                                                                                                                                    aaaTT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGTTTTGAACATa        >  2:1111116/1‑149 (MQ=255)
                                                                                                                                                    aaaTT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGTTTTGAACATAgg      >  2:11075/1‑151 (MQ=255)
                                                                                                                                                     aaTT‑CCCGCCT‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGTTTTGAACATAggg     <  1:1003443/151‑1 (MQ=255)
                                                                                                                                                        t‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGTTTTGAACATAGGGTCt  >  2:626917/1‑151 (MQ=255)
                                                                                                                                                          |                                                                                                                                                      
CCCCTCGAGCAATAGCGTCGCCACCAAGCACGCCAGTAAATGTTTTGCTGACCGAA‑CCTAACTCAAACAACGTTTGCTGTGTGACGGGCTGCTTTTTGGCGATGT‑CCGCATAGCCCCAGGTAAAGTAATAAGGTTTACCC‑TG‑ATAAATT‑ACCGCCA‑CCGCCATACCCGGGATCTTTTGTTGCTCTATAAGCGGGGTAATTGTGCGATGCACAATATCGTTGATTTGTTGAGGGGCAGCAAATGTGGAGCAAGAGGCGGTAATTAATAAGGCGCAGAGCGTCGTTTTGAACATAGGGTCT  >  NC_000913/4378653‑4378951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑