| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 5,159 | 0 | G | A | 39.7% | 91.9 / 36.8 | 73 | intergenic (+139/‑75) | thrC/yaaX | L‑threonine synthase/DUF2502 family putative periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base G (40/4); new base A (0/29); total (40/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.15e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTG > NC_000913/5010‑5303 | atcatcAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGgag‑a < 1:945554/151‑1 (MQ=255) catcaGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑aa < 2:488408/150‑1 (MQ=255) catcaGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AAt > 2:582413/1‑151 (MQ=255) catcaGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AAt > 2:91786/1‑151 (MQ=255) caGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATaac > 2:665383/1‑151 (MQ=255) caGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATaac > 1:381416/1‑151 (MQ=255) aTTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAATTTCTCAATAAATG‑CGGTCACTTAGAGATTAGGATTGCGGAG‑AATAACAAacgccg > 2:284228/1‑148 (MQ=255) ttCATTATCTAAATCAGGCGGGGTTGGGTTTTAGGCAGCCCGGTTTTTTTATGAAGAAATGATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTAAATAAATG‑CGGTAATTTAGAGATGAGGATTGCGGAG‑AATAACAAccgccg < 2:100570/147‑1 (MQ=255) ttATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATc > 2:898890/1‑151 (MQ=255) tCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAAtct > 2:351667/1‑151 (MQ=255) tCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAAtct > 1:656529/1‑151 (MQ=255) cAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAAtctc > 2:929176/1‑151 (MQ=255) ggCGGGTTTTGTTTTTATGCGCCCCGGTTTTTTTATGAAAAAATTAGGGAA‑AAAAATGACGGGAAAAAAGGAAAATTTCCAAATAAATG‑CGGAAATTAAGAGATTAGGATTGCGAAA‑AAAAAAAACCGCCGTTCTCATCGAGTAAtctc < 1:619872/149‑1 (MQ=255) ggCGGGGTTTGTTTTTATGCACCCCGGTTTTTTTATGAAAAAATTAGGAAA‑AAAAATGACAGGAAAAAAGGAAAATTTCCAAAAAAATG‑GGGTAACTTAGAGATTAGGATGGCGGAA‑AAAAAAAACCGCCGTTCTCATCGAGTAAtct < 1:224810/148‑1 (MQ=255) gCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCgg > 1:228283/1‑151 (MQ=255) tttttttttACGCACCCCGGTTTTTTTATAAAAAAATTATGAAA‑AAAAATAAAAGGAAAAAAGGAAAAATTCTCAATAAATG‑CGTTACCTAAGAGATAAGGATTGCGGAA‑AAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATc < 2:904873/145‑1 (MQ=255) ttgttttttCTGCAGCCCGGTTTTTTAAAAAAAAATTTAGGAAA‑AAAAATAACAGGAAAAAAGGAGAAATTCTAAAAAAAGG‑CGGTAACTGAGAGATTAGTATTGCGGAA‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATc < 2:437378/145‑1 (MQ=255) ttttaaagCAACCCGGTTTTTTAATGAAGAAATTAAGAAG‑AAAAAGGGAGGGAAAAAAGGAAAAATT‑TCAAAAAAGGTTGGTATCATAGAGTTTGGGGTTG‑GGAGAAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGa < 2:687465/141‑1 (MQ=255) tttATGCACCCCGGTTTTTTTATAAAAAAATAAGGAAA‑AAAAAGGACGGGAAAAAAGAAAAAATTCCCAAAAAATG‑GGGAAATTGAGAAATTAGGATGGGGGAA‑AAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCa < 2:753980/150‑1 (MQ=255) ttATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCa > 2:677944/1‑149 (MQ=255) ccgggtttttttATGAAAAAATAAGGAAA‑AAAAAGGACGGGAAAAAAGGAAAAATTCTAAATAAAGG‑CGGTAACTTAGAGATTAGGATTGCGGAA‑AAAAACACCCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCa < 2:208873/144‑1 (MQ=255) ccGGTTTTTTAAAAAAAAAATTAGGGAA‑AAAAATGAAGGGAAAAAAGGAAAAATTCTAAAAAAAGG‑CGGTAATTAAGAGATTAGGATGGCGGAA‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCa < 1:1012761/149‑1 (MQ=255) ccGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAAt > 2:783360/1‑151 (MQ=255) cGGCTTTTTAATAAAAAAATTATGGAA‑AAAAATGACAGGGAAAAAGGAAAAATTCAAAATAACCG‑CGATAAATTAAATCTTAGGATGGGGCAG‑AATAAAAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATg < 1:438342/151‑1 (MQ=255) ggtttttttAGAAAAAAATAAGGGAA‑AAAAATGACGGGAAAAAGGGAAAAATTCTAAATAAATG‑GGGTAAATTAGAGATTAGGATTGCGGAA‑AAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATg < 2:461037/147‑1 (MQ=255) ttttttATGAAAAAATTATGAAA‑AAAAAGGACAGGAAAAAAGAAAAAATCCTAAAAAAAGG‑CGTTAATTTAGAAATTAGAATTGCGAAA‑AAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGAt < 2:868436/149‑1 (MQ=255) tttATGCAGAAATTTTGGAG‑AAAAATGAAAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCACCGATCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATg > 2:540103/1‑144 (MQ=255) tATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAgg > 2:974806/1‑150 (MQ=255) agaaaaaaaTTAGGGAG‑AAAAATGAAAGGAAAAAAGAAAAAATTACAAAAAAAGG‑CGGTAATTAAGAGATTAGGATTGGGGAA‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAgg < 2:303398/143‑1 (MQ=255) gaagaaATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGt > 1:137985/1‑150 (MQ=255) aagaaATTATGAAA‑AAAAAGGACAGGAAAAAAGAAGAATTTCAAAATAAATG‑CGTTACCTTAGAGATTAGGATTGCGGAA‑AATACCAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTaa < 1:1088627/151‑1 (MQ=255) aaaaaTTAGGAAA‑AAAAATGACAGGAAAAAAGGAAAAATTCTAAAAAAAGG‑CGGTAACTAAGAGATTAGGATGGGGGAA‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAAc < 1:506640/149‑1 (MQ=255) aaaaaTTAAGGAAAAAAAATGACAGGAAAAAAGGAAAAATTCAAAATAAAGG‑GGATAAATAAAAGATAAGGATTGCGGAA‑AAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGt < 1:521327/147‑1 (MQ=255) aaaaTAATGAAA‑AAAAATGACAGGAAAAAGGGAAAAATTCTAAATAAAGG‑CTGTAATTTAGAGATTAGGATTGAGAAA‑AAAAAAAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAAcc < 2:350181/150‑1 (MQ=255) aaaTTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCt > 2:238847/1‑151 (MQ=255) aaTTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCtg > 1:728806/1‑151 (MQ=255) ttATGAAA‑AAAAATGAAAGGAAAAAAGGAAAAATTCTAAAAAAAGG‑CGTTAACTTAGAGATTAGGATTGGGGAA‑AAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCtgt < 1:91806/150‑1 (MQ=255) gag‑aAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGaaaa > 1:1081365/1‑150 (MQ=255) aaaaaTGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGaaaa > 2:306989/1‑147 (MQ=255) aaaaaTGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGaaaa > 1:717520/1‑147 (MQ=255) aaaaTGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATg > 2:987584/1‑151 (MQ=255) aaaTGAAAGGAAAAAAGGAGAATTTCTAAATAAATG‑CGTTACCTAAGAGATTAGGTTGGCGGAA‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGc < 1:314271/151‑1 (MQ=255) aTGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCa > 2:330859/1‑150 (MQ=255) aCAGGAAAAAAGGAGAAATTCCAAAAAAAGG‑GGGAAATTTAGAGATTGGGATTGCGGAA‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAAt < 1:255562/149‑1 (MQ=255) aCAGGAAAAAAGGAAAATTTCTAAAAAAATG‑CGTTAACTAAGAGTTTGGGATGGCGAAA‑AAAAACAACCGCCGTTCTCATCGAGTAATCTCGGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATc < 1:438951/150‑1 (MQ=255) aCAGGAAAAAAGGAAAAATTCTAAATAAAGG‑CGGTAACTTAGAGATTAGGATTGCGGAA‑AAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAAt < 1:869757/149‑1 (MQ=255) gggAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATc > 1:686955/1‑151 (MQ=255) gggAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGCGAAAAAGATGCAATCTATc > 1:392231/1‑151 (MQ=255) ggaaaaaaGAAAAATTTCTAAATAAATG‑GGTTATCTTAGAGGTAAGGTTGGCGAAA‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATc < 1:629423/144‑1 (MQ=255) aaaaaaGGAGAAATTCACAAAAAAGG‑CGTTAACTTAGAGATTAGGATGGCGGAA‑AAAAAAAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGt < 2:409977/150‑1 (MQ=255) aaaaaGGAGAATTTTAAAAAAAGTG‑CGGTAATTAAGAGATTAGGATGGGGGAA‑AAAAACAGCCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCg < 2:895575/149‑1 (MQ=255) aaaaaGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACTTGTGAAAAAGATGCAATCTATCGt > 2:738693/1‑150 (MQ=255) aaaaGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTAc > 1:797598/1‑151 (MQ=255) agaaaaaaTTCTCAAAAAAGG‑GGGTAATTAAGAGATTAGGATTTGGGAA‑AAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTc < 2:228220/145‑1 (MQ=255) agaAATTCTAAATAAAAG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACAGCAGTTCTCATCGAGTAATCTCCAGATATCGACCCATAACGAGCAGTGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCAc > 2:158629/1‑151 (MQ=255) gaAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACt > 2:1065446/1‑151 (MQ=255) aaaTTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACtt > 1:525943/1‑151 (MQ=255) tcAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTg > 1:824748/1‑151 (MQ=255) cAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTgg > 1:484902/1‑151 (MQ=255) aagg‑CGGTAACTTAGAAATTGGGATTGCGAAA‑AATACCAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTg < 2:121400/148‑1 (MQ=255) cGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCg > 2:110144/1‑151 (MQ=255) aaCTTAGAAATTAGAATGGCGAAA‑AAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTcc < 1:331949/151‑1 (MQ=255) aaCTAAGAGATTAGGATGGGGGAA‑AAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCt < 1:306965/149‑1 (MQ=255) cTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTccc > 2:421317/1‑150 (MQ=255) tAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATg > 2:200054/1‑151 (MQ=255) tAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATATCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTACCCTGTGAAAAAGATCCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATg > 2:27127/1‑151 (MQ=255) agaTTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgc > 1:51032/1‑150 (MQ=255) agaTTAGGATGGCGAAA‑AAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgc < 1:823152/150‑1 (MQ=255) gaTTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgc > 1:648323/1‑149 (MQ=255) ttAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgcagc > 2:286034/1‑150 (MQ=255) aGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGcac > 1:762537/1‑150 (MQ=255) gATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAgg > 1:6272/1‑151 (MQ=255) ggggAA‑AAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGccg < 1:899182/148‑3 (MQ=255) ggggAA‑AAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGc < 1:138085/146‑1 (MQ=255) | ATCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATG‑CGGTAACTTAGAGATTAGGATTGCGGAG‑AATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTG > NC_000913/5010‑5303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |