| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,042,604 | 0 | A | C | 39.4% | 136.6 / 16.8 | 71 | V182G (GTG→GGG) | yqfA | hemolysin III family HylIII inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (33/10); new base C (1/27); total (34/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.64e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCACCAGAGATAAAATTTTGAATCGGTGCGC > NC_000913/3042456‑3042749 | gcgcGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCAcc > 2:276518/1‑151 (MQ=255) cgcgTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCAccc > 1:246747/1‑151 (MQ=255) cgcgTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCAccc > 1:40848/1‑151 (MQ=255) cgTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCg < 1:535339/151‑1 (MQ=255) gTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGa < 1:734388/151‑1 (MQ=255) tCTTATCAGGCCTACTAAGGCATACCCATTCCGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCCCCCCg < 2:795230/149‑1 (MQ=255) cTTATCCGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGc > 2:902950/1‑151 (MQ=255) aGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATaa < 1:947299/151‑1 (MQ=255) aGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGAACGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATa < 2:1006137/150‑1 (MQ=255) ggCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATaaa < 1:305014/151‑1 (MQ=255) ggCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATaa > 2:479837/1‑150 (MQ=255) ccTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAAcc < 2:347387/151‑1 (MQ=255) tACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCAc > 2:989546/1‑151 (MQ=255) aCAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACGACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCAc < 2:1005224/150‑1 (MQ=255) cAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCAcgc < 1:349711/151‑1 (MQ=255) aaGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCAcgccg > 1:2474/1‑151 (MQ=255) cATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCa < 1:502771/151‑1 (MQ=255) aTTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGcc > 1:933535/1‑149 (MQ=255) ttACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGGTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGt > 2:330253/1‑151 (MQ=255) aCGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTa > 2:294025/1‑150 (MQ=255) gCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAAc > 1:591146/1‑151 (MQ=255) cccAATATACAAATAGATCGCCAGAAAGGGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTaa < 1:324050/149‑1 (MQ=255) ataCAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGccc > 1:1051787/1‑151 (MQ=255) aaaTAGACCGCAAAAAAGTGGCACCCACTCCCGCCGAGCACGAACCCGTGCCAA‑ATGGCTTGTTTTTATGGAATGCGTTT‑G‑CAGCCGTAAAAAACCCCCCCGAGCGAATAACCCCCGCCCCCTACCGCCAGTAAGGTAACGCTGCccgccg < 2:362658/151‑1 (MQ=255) aGACCGCAAAAAAGGGCCACCCCCTCCCCCCGGGCAGGAGGCGGTGCCAG‑AGGCCATGGTTGTAGGAAATGGGTTT‑G‑AAGAGGAAAAAAACCCCCCCGGGCAAATAACCCACGCCCCCTCCCGCCAGTAAGGTAACGCTGCCCGCCGCGAg < 1:56335/151‑1 (MQ=255) gATCGCCAGAAAGCGGCACACACTACCGCCGAGCACGACGCGGTGCCAG‑ATGGCATGGATGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCGCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCAGCCcgccgc > 2:45325/1‑147 (MQ=255) cccaaaaaaGTGCCCCACCCTCCCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGTTTGTATGGAATGCGTTT‑G‑CAGACGTAAAAAACCCCCCCGAGCAAATAAACCCCCCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCtt < 1:758247/144‑1 (MQ=255) ccAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAAc > 2:1090303/1‑151 (MQ=255) ccAAAAAGGGGCACACCCTCCCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGTTTGTATGGAATGCGTTT‑G‑CAGACGTAAAAAATCCCCCCGAGCGAAAAAACCACGCCCCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTaa < 1:270009/150‑1 (MQ=255) aGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACt > 2:586358/1‑150 (MQ=255) aGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTg > 1:295172/1‑151 (MQ=255) aGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTg > 2:849629/1‑151 (MQ=255) aaaGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGcc > 2:849066/1‑151 (MQ=255) aaaGGGGCACACACTCCCGCGGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTTTATGAAATGCTTTT‑G‑CAGCCGTAAAAAACCCCCCCGGGCGAAAAACCCCCGCCGCCTCCCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGc < 1:877727/150‑1 (MQ=255) aaaGGGCCACACACTCCCGCCGAGCACGAAGCCGTGCCAG‑AGGGCATGGTTGTATGAAATGCTTTT‑G‑CAGACGTAGAAAACCCCCCCGAGCAAATAAACCCCGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAAc < 1:795633/147‑1 (MQ=255) cccccccgccgAGCAGGAACCCGTGCAAG‑ATGGCATGGTTGTAGGGAATGCTTTT‑G‑CAGACGTAAAAAACCCCCCGGAGCAAAAAAACCCCGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATaaa < 1:49399/145‑1 (MQ=255) ccgccgAGCCAGAAGCCGTGCCAG‑ATGGGATGGTTGAAGGGAAGGCGTTT‑T‑CAGGCGAAGAAAATCCCCCAGGGCGAAAAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCACCGCGAGCTTAACTGCCATTTCATAAATTacca < 2:546669/151‑1 (MQ=255) ccgcaaGCACCAACCCGGGCCAGAATGGCATGTTTTTAAGGAA‑GGGTTT‑GACAATGTTAAAAAACCCCCCCGGGGAAATAACCACCCCCTCTTACCGCCAGTAAGTTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTacca < 2:556041/146‑1 (MQ=255) gAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAg > 1:538990/1‑150 (MQ=255) gAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGAcagc > 1:555074/1‑151 (MQ=255) ccGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGAcagccagc > 1:106286/1‑151 (MQ=255) gTGCCGG‑ATGGCAGGTTTTTAGGAAATGGTTTG‑G‑CAGCCGTAAAAAACCCCCCCGAGCAAAAAACCCCCGCCGCTTCCCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGccc < 1:989827/151‑1 (MQ=255) gTGCAAG‑AGGGCATGGTTGTAGGGAATGCTTTT‑G‑CAGACGAAAAAAACCCCCCCGAGCAAAAAACCCCCGCCCCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGccc < 1:761771/151‑1 (MQ=255) caggagggCATGTTTGTATGGAATGCTTTT‑G‑CAGACGTAAAAAACCCCCCCGAGCAAATAACCCCCGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCa < 1:368708/143‑1 (MQ=255) cAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCg > 1:291732/1‑151 (MQ=255) cAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCg > 2:919803/1‑151 (MQ=255) aG‑ATGGCTTGGTTGTATGAAATGCGTTT‑G‑CAGACGTAAAAAACCCCCCCGAGCGAATAACCCCCGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCg < 1:127306/150‑1 (MQ=255) ggagtGGTTTTGTGAAGTGCTTTT‑G‑CAGACGAAAAAAACCCCCCCGAGAAAAAAACCCCCCCCGCCGCCCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCg < 2:772147/142‑1 (MQ=255) ggCATGTTTTTATGAAATGCTTTT‑G‑CAGACGTAGAAAATCCCCCCGAGCGAATAACCCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAg < 1:765985/150‑1 (MQ=255) aTGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGAt > 2:179396/1‑149 (MQ=255) gtttttATGGAATGGTTTT‑G‑CAGACGTAAAAAATCCCCCCGAGCAAATAACCCCCGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGt < 1:912897/146‑1 (MQ=255) gtttGTAGGGAATGCGTTT‑G‑CAGACGAAAAAAACCCCCCCGAGCGAAAAACCCCCCCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATa < 1:809606/146‑1 (MQ=255) ggTTGTATGGAATGGTTTT‑G‑CAGCCGAAAAAAACCCCCCCGAGCGAATAACCCCCCCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAgg < 1:170044/150‑1 (MQ=255) tgttATGGAAT‑CGTTTGG‑CAGACGAAAAAATCCCCCCCGGGCAAAAAACCCCCCCCCCCACCCGCCATTAAGGTACCCCGGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATa < 2:601894/143‑1 (MQ=255) ttgggAAGGCTTTT‑G‑CCGACGTAAAAACCCCCCCCGAGCAAAAAACCCCCCCCCCCTCCCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCAc < 1:35354/146‑1 (MQ=255) taggaaaTGCGTTT‑G‑CAGACGTAAAAAACCCCCCCGAGCAAAAAACCCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCAcc < 1:453522/145‑1 (MQ=255) ggAATGCGTTT‑G‑CAGACGTAAAAAACCCCCCCGAGCAAAAAACCCCCGCCGCCTCCCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCACCaga < 1:668207/150‑1 (MQ=255) ctttt‑G‑CAGCGCTAAAAAATCCCCCCGGGCGAAGAAACCCCCCCCCCTACCGCCAGTAAGGTAACGCTCCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCACCAGAGATaa < 2:957162/147‑1 (MQ=255) ttt‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCACCAGAGATAAAAtt > 1:765325/1‑151 (MQ=255) tt‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCACCAGAGATAAAAttt > 1:345395/1‑151 (MQ=255) ttggcggACGTAAAAAACCCCCCGGAGGAAATAACCCCCCCCCCCGCCCGCCATTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCACCAGAGATAAAAt < 2:1050018/144‑1 (MQ=255) aGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAACTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCACCAGAGATAAAATTTTg > 2:208412/1‑149 (MQ=255) aGACGTAGAAAACCCCCCCGAGCGAATAAACCACGCCGCCTACCCCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCCGATAGCTCACCAGGGATACAATTTTGa > 2:405556/1‑150 (MQ=255) aggTAAAAAATCCCCCGGAGCGAAAAAACCACCCCGCCTCCCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCACCAGAGATAAAATTTTGAAt < 2:533929/148‑1 (MQ=255) aCGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCACCAGAGATAAAATTTTGAATc > 1:913608/1‑151 (MQ=255) gTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCACCAGAGATAAAATTTTGAATCgg > 1:1048608/1‑151 (MQ=255) gTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCACCAGAGATAAAATTTTGAATCgg > 2:306491/1‑151 (MQ=255) aaaaTCCCCCCGAGCAAATAACCCCCCCCCCCTCCCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCACCAGAGATAAAAtttt < 2:337047/140‑1 (MQ=255) aaaaTCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCACCAGAGATAAAATTTTGAATCGGTgcg > 2:3990/1‑151 (MQ=255) aaaTCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCACCAGAGATAAAATTTTGAATCGGTgcgc > 1:849471/1‑151 (MQ=255) aaaTCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCACCAGAGATAAAATTTTGAATCGGTgcg > 1:272445/1‑150 (MQ=255) | GCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAG‑ATGGCATGGTTGTATGGAATGCGTTT‑G‑CAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCATCGCCAGATAGGTCACCAGAGATAAAATTTTGAATCGGTGCGC > NC_000913/3042456‑3042749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |