| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,423,297 | 0 | G | C | 40.3% | 98.2 / 27.8 | 63 | intergenic (+103/+126) | yhdZ/rrfF | putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon |
| Reads supporting (aligned to +/- strand): ref base G (10/27); new base C (25/0); total (36/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.32e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTC > NC_000913/3423150‑3423443 | aaaTCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGc < 2:1053732/151‑1 (MQ=255)aaaTCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGCCCTTCCCCCCCCCCTCCGGGc > 1:376398/1‑151 (MQ=255) aaTCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGcc < 1:247387/151‑1 (MQ=255) cGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTc < 2:1099589/151‑1 (MQ=255) aCGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCGCCCCCCCCCCCCCCGGcccgttct > 2:188988/1‑140 (MQ=37) aGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTGCCCCCCCCCCCCCCCGCCGGTGCTTCGCaa > 1:1018444/1‑149 (MQ=255) aTTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑Ca < 2:100990/150‑1 (MQ=255) aTTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCGCCCGCCACCCTCCCGGCCGTTGTTTTGCAACCtt > 1:634263/1‑148 (MQ=255) gCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGTCCTGCCCCCCCCCCCCCCGGCCCCGGCTTCTCAACGTT‑CC‑AATACCCTcc > 2:1105404/1‑151 (MQ=255) cAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGTCCCGCCCGCCACCCTCCCGGCCGTTGCTTCGCAACGTT‑CA‑AATcccccccc > 1:426282/1‑151 (MQ=255) aGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTGCTGGCCCCCACCCCCCCGGCCGTTGCTTCGCTACGTT‑CT‑AAAACGCcccc > 2:315608/1‑150 (MQ=255) ggTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGCCCCGCCCCCCCCCCCCCCGGCCGTTGCTTTGCAAACTT‑CA‑AAAcccccccc > 1:766052/1‑149 (MQ=255) gTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGTGTCCTTCCCCCCACCCTCCGGGCGGCTGCCTTTCCAGGTT‑CA‑AATCCGCTccc > 1:48034/1‑148 (MQ=255) aaTCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCcggcg < 2:266308/150‑1 (MQ=255) aaTCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTTCCCCCCCCCCCCCCGGCCGTTGGTTTGCAACGTT‑CC‑AATCCGCTCCccgcgg > 1:258591/1‑151 (MQ=255) ccATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTGCCCGCCCCCCCCCCGGCCCGTGCTTCGCAACGTT‑CA‑AATCCGCTCCccgcgg > 1:615531/1‑148 (MQ=18) ttAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTg < 2:1072651/150‑1 (MQ=255) ttAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCCGCCCCCCCCCCCCCCGGCCGTTGCTTCGCAACGTT‑CA‑AATCCCCCCCCCGCGG‑GTTTGt > 1:208441/1‑151 (MQ=18) ttAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCCGCCCCCCCCCCCCCCGGCCGTTGCCTTGCAACGTT‑CA‑AATCCGCcccc > 2:326342/1‑140 (MQ=255) tAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCCCCCCTCCCCCCACCCTCCGGCGCGTTCCCTCGCAACCTT‑CA‑AATCCACTCCccgctgtgtttt > 1:1111890/1‑142 (MQ=255) gAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTAc < 1:503359/150‑1 (MQ=255) gAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACt < 1:1109087/151‑1 (MQ=255) aaTGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCCCCCCTCCCGGCCGTTGCTTCGCCACGGT‑CA‑AAACCCCTCCCCGCGG‑GGTTGTTCTtctc > 1:640442/1‑151 (MQ=18) tAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGga < 1:599033/150‑1 (MQ=255) gTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGagag < 2:610728/151‑1 (MQ=255) ttCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGGCTGCCCGCCCCCCCCCCGGCCCCTGCTTCTCAACTTT‑CA‑AATCCGCCCCCGGCGG‑GGTTGTTCttatccgggg > 2:579318/1‑139 (MQ=255) cGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAgtg < 1:586417/150‑1 (MQ=255) aaaaGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCCGCCCCCCCCCCCCCCGGCCCGTGCTTCGCAAACTT‑CA‑AAACCCCCCCCCGCGG‑GTTTGTTCTCCTCCGgag > 1:247817/1‑144 (MQ=255) aaaGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGGCCTGCCCGCCCCCCCCCCGGCCGTTGTTTTGCAACGGT‑CA‑AATCCGCCCCCCCCGG‑GGTTGTTCTTCTCCGGagaggg > 1:945153/1‑145 (MQ=255) aaaaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCCCCCCCCCCGGCCGTTGCTTCGCAACCTT‑CA‑AATCCCCCCCCCGCGG‑GTTTTTCCCACTCCGGAGAGGGTTTACCCac > 1:1039955/1‑150 (MQ=14) aaaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCGCCCGCCCCCCCCCCGGGCCTTTCTTTCCAACGTTCCA‑AACCCCCCCCCGCCGG‑GTTT‑TTCTACTCTGGggaggggtgatc > 2:110193/1‑138 (MQ=9) aaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGGCCGCCCGCCCCCCCCCGGGCCGTTGCTTTGCAAACTT‑CACAATCC‑CCCCCCGCGG‑GCTTTTCCCCCTCCCGCGAGTGTTTACCGa > 2:410860/1‑147 (MQ=9) aaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCCGCCCCCCCCCCCCCCGGCCGTTTCCTTCCAAACTT‑CC‑AATCCCCCCCCGGCGG‑GGTTGTTCTACTCGGGGGGGGGGTTACCGac > 2:854936/1‑148 (MQ=12) gCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCCCCCCCCCCGGCCGGTGCTTCGCAACGTT‑CA‑AAAACCCCCCCCGCGG‑GTTTTTTCTCCTCCGGGGGGGGTTCAcc > 1:886706/1‑142 (MQ=14) cATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAacaaca < 2:169547/151‑1 (MQ=255) tCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATaaa < 1:2789/150‑1 (MQ=255) tCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTGCCCCCCCCCCCCCCGGCCGTTGCTTCGCAACGTT‑CA‑AATCCCCCCCCCGCGG‑GTTTTTCCTACTCGGGAGAGTGGTCACCCACAAACAACAGATaaa > 1:854364/1‑150 (MQ=14) cGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTGCCCCCCCCCCCCCGGGCCGGTGCTTCGCAACGTT‑CA‑AATCCGCTCCCCGCGG‑GTTTTTCCTACTCCGGAGAGTGGTTACCGACAAACAACAGATaaaa > 1:521110/1‑150 (MQ=14) ggATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCCCCCCCCCGGGCCCTGCTTCGCAACGTT‑TA‑AATCCGCTCCCCGCGG‑GTTTGTCCCACTCGGGAGAGGGTTTTCCCACAAACCAAAAATaaaa > 1:1023985/1‑149 (MQ=14) ggATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCCCCCCCCCCGGCCGGTGCTTCGCAAAGTT‑CA‑AATCCCCCCCCCGCGG‑GTTTTTTCTACTCGGGAGAGAGGTCACCCACAAAAAAAAGATaaaa > 1:922691/1‑149 (MQ=14) gCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAgg < 2:1018116/151‑1 (MQ=255) gCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAgg < 1:621691/151‑1 (MQ=255) cGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAg < 2:157211/150‑1 (MQ=255) gCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGTCCTGCCCGCCACCCCCCTCGCCGGTGCTTTGCAAAGAT‑CA‑AATACCCTCCCCGCGG‑GGTTTTCCTACTTGGGGGAGGGGTTTCCGGCAAAAAAAAGAAAAAAA‑AAAAAGGCCCGTc > 2:1037756/1‑151 (MQ=255) gatttgatGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAGTCTTcc < 2:767366/151‑1 (MQ=39) gatttgatGTCTGGCAGTTTATGGCGGGCGGGCTGCCCCCCCCCCTCCCGGCCGTTGATTTTCAAAGGT‑TA‑AAAACGCTCCCCGCGG‑GCCTTTCCTCCTCGCGGGAGGGTTCACCGACCAACAAAAGATAaaaa‑aaaaaaaccaacc > 2:914612/1‑138 (MQ=255) atttgatGTCTGGCAGTTTATGGCGGGCGGCCCGGCCCCCCCCCTCCCGGGCGGTGCTTCGCAACGTT‑CA‑AATCCGCTCCCCGCGGCGTTTTTCCT‑CTCCGGAGGGTGGTGAACGACAAAAAACAAAAAAAAC‑AAAAAACCCCGACTTccc > 2:891634/1‑150 (MQ=2) tttgatGCCTGGCAGTTTATGGCGGGCGGCCTCCCCGCCACCCTCCCCGCCCGTTCTTTGCCACGTT‑TC‑AATCCGCTCCCCGCGG‑GCTTTTCCTTCCCCAGGGAGGGGTCCCCCCCCAAAAAAAAATAAAACAAAAAGGCCCGGCCttt > 2:603708/1‑148 (MQ=0) cTGGCAGTTTATGGCGGGCGGCCTGCCCGCCACCCCCCGGGCCGTGGCTTTGCAACGTT‑CC‑AATCCGCCCCCGGCGG‑GGTTGTCCTACTCCGCGGAGAGTTCACCCACAAAAAACAGATAAAAC‑AAAAAACCCCGCCTTCCGACTGAGcc > 2:66527/1‑150 (MQ=11) tGGCAGTTTATGGCGGGCGTCCTGCCCGCCACGCTCCGGGCCGTTGCTTCGCAACGTT‑GA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGCGAGTTTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAGTCTTCCGACTGAGCCt < 2:629141/150‑1 (MQ=255) gCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAGTCTTCCGACTGAGCCtttt < 2:748118/151‑1 (MQ=37) cAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAGTCTTCCGACTGAGCCTTTTg < 2:519473/151‑1 (MQ=37) cgggcgTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGa < 2:857411/151‑1 (MQ=38) cgggcgTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGa < 1:130324/151‑1 (MQ=38) gggcgTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGCTAAAAC‑AAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGAt > 2:275663/1‑151 (MQ=38) tCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTg > 1:18023/1‑151 (MQ=40) ccTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTgg < 1:559895/151‑1 (MQ=40) gCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGc > 2:542247/1‑149 (MQ=40) gCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCa < 2:770781/150‑1 (MQ=40) ccACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTccc > 1:735742/1‑151 (MQ=40) cACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCt < 1:1045536/151‑1 (MQ=40) cccTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTa < 1:295228/150‑1 (MQ=40) ccGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTActc < 1:579516/149‑1 (MQ=40) | AAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTT‑CA‑AATCCGCTCCCGGCGG‑ATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAC‑AAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTC > NC_000913/3423150‑3423443 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |