| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,825,061 | 0 | G | A | 45.5% | 76.9 / 41.9 | 66 | intergenic (‑124/+79) | ves/spy | cold‑ and stress‑inducible protein/periplasmic ATP‑independent protein refolding chaperone, stress‑induced |
| Reads supporting (aligned to +/- strand): ref base G (32/4); new base A (0/30); total (32/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.50e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGC > NC_000913/1824915‑1825208 | ttACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGagaaaagaaa < 2:757885/150‑1 (MQ=255)ttACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGagaaaagaaa < 2:279572/150‑1 (MQ=255) aCGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑cc > 2:315776/1‑151 (MQ=255) gCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑ccgc < 1:347518/151‑1 (MQ=255) cATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑ccgcc > 1:212596/1‑151 (MQ=255) atCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGAt > 1:562799/1‑151 (MQ=255) cAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATcc > 1:797539/1‑151 (MQ=255) aaaGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCt > 1:503083/1‑151 (MQ=255) tATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTcc > 1:12508/1‑151 (MQ=255) aTTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTcc > 2:493941/1‑150 (MQ=255) ttCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCCACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑ACGCCGATCCTGTTCAc > 2:679303/1‑151 (MQ=255) tCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCAcc > 1:16385/1‑151 (MQ=255) tCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCAcc > 2:254037/1‑151 (MQ=255) cccATCCTCCCTCCCGGCCTTTTTTTTTCATTGTTATCTTTC‑GGTGACGGGGGGATGGTTATCGGCAATGCGGGTTATTTCTGTTGG‑TGGGGTTCAGGTTTTTTTTACAACTTTTTAAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCAcc < 2:557961/150‑1 (MQ=255) cATACTCGCCCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTACC‑CGGGGATGTTTATCGGCACCTCGGGTTTTTTACGTTAG‑TGGTGATCAGGTTTTTTTTACACCTGTTGGAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGc < 1:25305/151‑1 (MQ=255) cTCCCGGCCCGTTTTTTTCTTTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGCCAACTGGGGTGATTTACGTTAG‑TGGTGATCGGTTTTTTTTTACAACTTTTTGAAAAGAGAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACt < 1:130870/149‑1 (MQ=255) cTCCCGCCCGTTTCTTTTCATTGTTCTCTTACAGGAAAC‑CGGGGATTTTTCTCTGCAACCGGGGAAATTTACGGTAG‑GTGCAATCAGGTTTTTTTTCCACTTTTGGGAAAAGAAAAAAAAAAG‑CCGCCGATCCTGTCCACCGCATTACt < 2:907875/149‑1 (MQ=255) cccGGCTCTTTTTTTTGTTTTTTATCTTTAAGGAAAC‑CGTGGATTGTTTGCGGCAGCTGGGGTAATTTCCGTTGG‑TGGTCAGCGTGTTTTTTTAACAACTGTTGGAGAAAGAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCAt < 2:412126/143‑1 (MQ=255) ccGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCa > 2:545075/1‑149 (MQ=255) cGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAgg > 2:355071/1‑151 (MQ=255) cGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAgg > 1:795819/1‑151 (MQ=255) gcccggTTTTTTTTTTTTTTATAGTTCAGGAAAC‑GGGGGTTGTTTAGCGTAAACTGGGGTATTTTACGTTAG‑TGGTTATCAGGTTTTTTTTACAGCTTTTAGAGAAGAGAAAAAAAAG‑CCGCCGATCCTGTCCACCGCATTACTGCAAgg < 2:702771/145‑1 (MQ=255) gTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTgg > 1:1004887/1‑151 (MQ=255) ttttCTTTTTTTTCGTTCAGTTACC‑CGTTGATTGTTACCGCCAACTGGGTTGTTTTACTTTAG‑TGGTACTCAGGTTTTTTTTAAATTTTTATAAAAAAAAAAAAAAAAG‑CCGCCGATCCTGTCCACCGCATTACTGCAATGTAGTGGAc < 2:697794/149‑1 (MQ=255) aTTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcg > 2:162334/1‑151 (MQ=255) tttttATCGTCCAGGGAAC‑GGTGTATGTTTATCGGCAACTCGGGTGATTTACGTTGG‑TGGTGATCAGGTTTTTTTCAAAATTGTTTGAAAAAAGAAAAGAAAC‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcg < 2:1076058/147‑1 (MQ=255) gTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcggcg > 2:1167952/1‑151 (MQ=255) ttatcgtcggggcagc‑cGTAGTTGGTTATCGTCAACTTGGTTTATTTACTTGAG‑TGGTGTTAATGTTTTTTTACCATCTATTTGAAAAAAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcggcg < 1:736249/135‑1 (MQ=255) tATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGt > 1:467748/1‑151 (MQ=255) aTCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTc > 1:57405/1‑151 (MQ=255) tCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCtt > 2:1116331/1‑148 (MQ=255) gttacc‑cGTGGATGTTTATCGGCACCTCGGTTGATTTATTTTAG‑TGGTATTCAGTTTTTTTTTACAATTGTTTGAGAAAAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTaa < 2:412965/142‑1 (MQ=255) ggTACC‑CGTGGATGTTTATCGGCAACGGGGGTATTTTACTTTAG‑GGGTGATCAGTTTTTTTTTACAACTTTTTGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGttt < 1:944344/151‑1 (MQ=255) c‑cGTGGATGTTTATCGGCATCTCGGGTGTTTTACTTTAG‑TGGTGATCAGTTTTTTTTTACAATTGTTTGAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTgg < 1:76043/151‑1 (MQ=255) cggTGGATGTTTATCGGAAACGGGGGTGATTTACTTTAG‑TGGTGATCGGGTTTTTTTTACAATTTTTGGAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTg < 1:1271287/148‑1 (MQ=255) ggATGGTTTCCGGCATCTGGGGTTATTTTGTTTAG‑TGGTTATCAGTTTTTTTTTCCAACTTTTAGAGAAGAGAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTg < 2:731369/150‑1 (MQ=255) ggATGGTTCCCGGAAGCTGGGGTATTTTGCTTGAG‑TGGTGATCGGCTTTTTTTTACATATGTTTGAGAAAAAAAAAAAAAC‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGttttt < 1:517150/144‑1 (MQ=255) ttATCGGCAACTCGGGTGTTTTACGTTAG‑TGGTGATCAGTTTTTTTTTACATCTGTTGGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGa < 1:185490/149‑1 (MQ=255) atcgccaccggggggGATTTA‑GTTAGTTGGTGACCAGTTTTTTTTTACAACTGTTGGGAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGatta < 2:513914/139‑1 (MQ=255) ggCACCTGGGGTGATTTACGTTAG‑TGGTGATCAGGTTTTTTTTACAACTGTTTAAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTc < 1:466218/150‑1 (MQ=255) gacaatttgggTGATTTACGTATG‑TGGTGATCGGGTTTTTTTTACATATTTTAGAGAAAAAAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGattat < 2:706031/140‑1 (MQ=255) gacAACTGGGGTGATGTAGGTTAG‑GGGTAGTCGTGTTTTTTTAACAGTTTTTTGGAAAGA‑AAAAGAAAAGCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGatta < 2:845721/145‑1 (MQ=255) cAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTcagc > 1:1092414/1‑151 (MQ=255) acctggggTGTTTTACTTTAG‑TGGTGAGCAGGTTTTTTTTACAACTTTTGGAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTcagca < 1:975006/146‑1 (MQ=255) gTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGc > 1:824079/1‑149 (MQ=255) tGATTTACGTTAG‑GGGTGATCAGGCTTTTTTTACAACTGGTTGAGAAGAGAAAAGAACA‑CCGCCGATCCTGTCAACCGCATTACTGCAAGGTAGTGGACACGACCGGCGGTCTTTAGATTTTTGGCGGAAAGGTTATTCAGCCGTTGCAgg > 2:602144/1‑151 (MQ=255) tttagtttAG‑GGGTGATCAGTTTTTTTTTACATTTGTTGAAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCa < 1:233587/140‑1 (MQ=255) tttACTTTAG‑TGGTGATCAGGTTTTTTTTACAACTTTTGGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAg < 1:1203296/147‑1 (MQ=255) tttACGTTAG‑TGGTGATCAGGTTTTTTTTACAACTGTTTGAGAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAgg < 1:636270/148‑1 (MQ=255) gTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTTTTCAGCAGTTGCAGGCAtttt > 2:1031293/1‑149 (MQ=255) ttAG‑TGGTGATCGGGTTTTTTTAAAAACTGTTTGAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCAtt < 1:723852/146‑1 (MQ=255) tAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCt > 1:359856/1‑151 (MQ=255) ggtgATCGTGCTTTTTGTCCATTTGTTAGAAAAGAAAAAAAAAAG‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCtttt < 2:7397/150‑1 (MQ=255) ggttttttttACAACTTTTTGAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTg < 1:355228/146‑1 (MQ=255) ttttACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGGTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCt > 1:690436/1‑151 (MQ=255) ttttACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGAAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTTAGGAGTTGCAGGCATTTTACCTTTTGCCGCCGGACGt > 1:845409/1‑148 (MQ=255) aCAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGATTTTTGGCTGAAAGATTATTTAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGt > 1:266314/1‑149 (MQ=255) cTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTTCCGCTGGACGTTCTGTCAGAc > 2:1166765/1‑150 (MQ=255) cTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGAc > 1:59909/1‑150 (MQ=255) tttttGAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGAc < 1:954569/147‑1 (MQ=255) tttGAAAAGAAAAAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACg < 1:800006/148‑1 (MQ=255) tGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTTTTCAGCAGTTGCCGGACATTTACCTTTTGCCGCTGGAAGTTCTGTAAAACGCTtct > 2:1168304/1‑151 (MQ=255) gagaagagaaAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTtct > 1:155427/1‑150 (MQ=255) gaaaaaaaaaaaaaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCt < 1:800104/139‑1 (MQ=255) aaaagaaaaAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTtc < 1:1144118/146‑1 (MQ=255) aagagaaAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCaa > 1:425879/1‑150 (MQ=255) aagaaaaaagaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTtctc < 2:269262/148‑1 (MQ=255) aagaaaaAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCa < 1:1204659/149‑1 (MQ=255) agaaaaAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCaaaa < 2:170718/151‑1 (MQ=255) agaaaaAAAAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCaaa < 1:1194935/150‑1 (MQ=255) aaaaaaaaaaac‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCaaaa < 1:59051/147‑1 (MQ=255) aaaaaaaaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAAtt < 1:494361/149‑1 (MQ=255) gaaaagaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGACTTTAGGTTTTTGGCTGAAAGATTATTCAGGAGGTTCAGGCATTTTACCTTTTGGCGCTGGACGTTCTGTTAGACGCTTCTCAAAAtt > 1:1284396/1‑150 (MQ=255) aaaaaaaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCaaaa < 2:662388/147‑1 (MQ=255) aaaaaaaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTa < 1:315926/150‑1 (MQ=255) aaaaaaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAg < 1:254176/151‑1 (MQ=255) aaagaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGc > 1:510778/1‑151 (MQ=255) aaaaaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGc < 2:525742/151‑1 (MQ=255) aagaaaa‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGc > 1:14752/1‑150 (MQ=255) | TTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAAC‑CGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAG‑TGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAA‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGC > NC_000913/1824915‑1825208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |