| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 5,162 | 0 | T | A | 38.1% | 124.7 / 40.9 | 85 | intergenic (+142/‑72) | thrC/yaaX | L‑threonine synthase/DUF2502 family putative periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base T (40/12); new base A (0/32); total (40/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.13e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATT > NC_000913/5012‑5311 | catcaGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAAt < 2:897134/151‑1 (MQ=255) tcaGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATa > 1:380777/1‑150 (MQ=255) caGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATaa < 1:886584/150‑1 (MQ=255) aGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTGTTATGAAGAAATTATGGAGAAAAATGACAGGGGAAAAG‑GAGAAATTCTCAATCAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATaaca < 2:538206/151‑1 (MQ=255) tAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATaacaa‑c > 1:811392/1‑151 (MQ=255) aaaTCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑ccg > 2:342332/1‑151 (MQ=255) aaaTCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑ccg > 1:726837/1‑151 (MQ=255) aTTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTtc > 1:877517/1‑151 (MQ=255) cATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTtctc > 2:362232/1‑150 (MQ=255) cATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTtct > 2:595724/1‑149 (MQ=255) aTTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCAt > 1:815097/1‑151 (MQ=255) cAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTa > 1:1009624/1‑150 (MQ=255) aGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTcc > 1:53060/1‑151 (MQ=255) ccGGGTTTCCTTTTAGGCACCCCGTCTTTTTTAAGAA‑AAAATAAGGAAGAAAATGAAAAGGGAAAAG‑AAGGAAATCCAAAAAAAGGTGGGTACTGTAGAATTTAGG‑GTGGCGA‑AGAAAACCAT‑CCGCCGTTCTCATCGAGTAATCTCCgg < 2:709815/150‑1 (MQ=255) tttGTTTTTATGCAGCCCGGTTTTTTTATAAAAAAATTAGGAAAAAAAATAACAGGAAAAAAG‑AAAAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATGGGGG‑AGAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATc < 1:396936/150‑1 (MQ=255) ttGTTTTTAGGAAGCCCGGTTTTTTTAGGAAAAAATTATGGAAAAAAATGAAAGGAAAAAAG‑GAAAAATTCTAAATAAATGCGGTAACT‑TAGAGATTAGA‑ATGGCGG‑AAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCg < 1:958953/150‑1 (MQ=255) taggCACCCCGGTTTTTTTATGAAAAAATTATGAAAAAAAAGGACAGGAAAAAAG‑GAAAAATTCTAAATAAATGCGATAATT‑TAGAAATAGGG‑ATTGGGG‑AGAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATa < 1:641088/147‑1 (MQ=255) aggCACCCCGGTTTTTTAAGGAAAAAATTATGAAAAAAAATGACAGGAAAAAAG‑GAAAAATCCTCAAAAAATGCGGTAACT‑TAGAGATAAGG‑TTTGCGG‑AAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATa < 1:542236/147‑1 (MQ=255) tGCACCCCGGTTTTTTTATAAAAAAATTAGGGAAAAAAATGAAAGGAAAAAAG‑AAAAAATTCTCAAAAAAGGCGGTAACT‑AAGAGATTAGG‑ATTGGGG‑AAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAAc < 1:1250132/150‑1 (MQ=255) gCAGCCGGGCTTTTTAAAGAAGAAATAAAGGAAAAAAGAGAGAGGAAAAAGG‑AAGAACTTATCAATAAATGC‑GTAATC‑GAAAAAATAGGTAGTGGGG‑AAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAAc < 2:352707/149‑1 (MQ=255) cAGCCCGGTTTTTTTATGAAGAAATTAGGGAGAAAAAGGACAGGAAAAAAG‑GAGAAATTCTAAAAAAAGGCGTTAATT‑TAGAGATTAGG‑ATTGCGG‑AAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACg < 1:868225/149‑1 (MQ=255) gccggttttttttAAAAAAAATTTATGGAAAAAAAAGAGAGGAAAAAAG‑GAAAATTTCTAAATAAAGGCGGTATTT‑TAGAGATTGGG‑GTGGCGG‑AAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACggg < 1:976360/142‑1 (MQ=255) cccGGTTTTTTTATGAAAAAATTAGGAAAAAAAGTGAGAGGAAAAAAG‑GAAAAAGCCGAAAAAAATGCGATAACT‑TAGGGATGAGG‑ATGGGGG‑AAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCaa < 1:541807/151‑1 (MQ=255) gttttttttAGAAAAAAATTAGGAAAAAAAATGACAGGAAAAAAG‑GAAAAATTCTAAATAAAGGCGGTAGCT‑GAGAAATTAGG‑ATTGGGG‑AAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATg < 2:557063/147‑1 (MQ=255) gCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGAt > 1:414011/1‑151 (MQ=255) gCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGAt > 1:337079/1‑151 (MQ=255) cTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑CTTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAAAGGGCAATGAt > 2:675600/1‑150 (MQ=255) cTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGAt > 1:400415/1‑150 (MQ=255) ttttttATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATa > 1:655941/1‑150 (MQ=255) ttttttATGAAAAAATTAGGGAAAAAAATGACAGGAAAAAAG‑GAAAATTTCTAAATAAAGGCGTTAACT‑TAGAGATTAGG‑ATGGCGG‑AAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGAt < 1:462160/149‑1 (MQ=255) ttttttATAAAGAAATTAAGGAAAAAAATGACAGGAAAAAAG‑GAAAAATTCAAAAAAAGTGGTGAAACT‑AAAATATTAGG‑ATTGGGG‑AAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGAt < 1:723111/149‑1 (MQ=255) tttttAAAAAAAAATTAGGGAAAAAAATAACAGGAAAAAAG‑AAAAAATCCAAAAAAAAGGCGTTAATT‑TAGAAATTAGG‑ATTGCGA‑AAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATaa < 2:631938/150‑1 (MQ=255) tttaaaaaaaaaaTTGTGAAAAAAAAGAAAAGGAAAAAAG‑AAAAATTTCACATATAATGCGGTAATT‑AAAAAATGAGG‑ATTACGA‑AAAAAACCAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATaa < 2:1054447/139‑1 (MQ=255) taaaaaaaaaTTAT‑GAAAAAAAGAAAAGAGAAAAAGAGAAAAATTCCAAAAAAATGCTGTAAAT‑AAGA‑AATGGG‑AATGGGG‑ATAATAACAAGCCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAgg < 2:92167/143‑1 (MQ=255) aaaaaaTTATGGAAAAAAATGAAAGGAAAAAAG‑GAAAAATTCTCAAAAAATGGGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGa < 1:230731/144‑1 (MQ=255) acaTTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCt > 2:695818/3‑151 (MQ=255) aaaTTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCt > 2:42762/1‑151 (MQ=255) aaTTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCtg > 1:826765/1‑151 (MQ=255) aaTTAGGGAAAAAAAGGAAAGGAAAAAAG‑AAAAAATCCAAAAAAAATGCGGAAACT‑TAGAGATAAGG‑ATGGGGG‑AGAAAAACAG‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCtg < 1:621690/151‑1 (MQ=255) aTTATGGACACAATTGACAGGTAAAAAG‑GAGAAATTCTCGATAGCTGAGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CAGACGCCCTCACCGTGTAATCTCACGCTACCGACCCCTAACGGGCAATGACAAAAagagacac > 2:858393/1‑143 (MQ=255) gaaaaaaaTAAGAGGAAAAAAG‑AAAAAATGCAAAATAAGGGGTGTAATT‑TGGAGAATAGG‑AGTGCGG‑AGAA‑AACAACCCGGCGTTCTCATCGAGTAATCGCCGGATATCGACCCATAACGGGCAATGATAGAAGGAGTAACCTGTGaa < 2:148638/145‑1 (MQ=255) aaaaaaaTGACAGGAAAAAAG‑GAAAAATTCTAAAAAAATGCGTTAATT‑TAGAGATTAGG‑ATGGCGG‑AAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGa < 1:518729/144‑1 (MQ=255) aaaaaaaGGACGGGAAAAAAG‑AAAAATTTCAAAAAAAATGCGTTAATT‑TAAAGTTAAGG‑ATGGCGG‑AAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGaaaa < 1:690581/147‑1 (MQ=255) aaaaaaTAAGAGGAAAAAAG‑AAAAAATCCT‑AAAAAATTGGGATACA‑TAAAGTTTGAG‑ATTTGGG‑AAAAAAAAAACCCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGa < 2:1010439/150‑1 (MQ=255) aaaacaaacagaaaaaaaG‑AAAAAATTCTAAATAAAGGCGGTAACT‑TAGAGATAAAG‑AGGGCGA‑AAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGAt < 2:94090/138‑1 (MQ=255) aaaaaTGACAGAAAAAAAG‑AAAATATCAAAAATAAGGGGGATAACT‑AAGAAATTAGG‑ATGGCGG‑AAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAg < 1:260649/149‑1 (MQ=255) aaatagagaGGAAAAGAG‑AAGAAATTTACAAAAACAGCGGTATTA‑TAGTGATTGGG‑CGGGCGA‑AGAAAAACTA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATg < 2:1114136/143‑1 (MQ=255) aaaaTGACAGAAAAAAAG‑GACAAATTCTAAAGAAATGCTATAATT‑TAGATATTAGG‑ATGGCGA‑AAAATAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATg < 2:1168185/151‑1 (MQ=255) aaggACAGGAAAAAAG‑AAAAAATTCAAAAAAAAGGGGGTAACT‑AAGAGTTTAGG‑ATTGGGG‑AAAATAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCa < 1:822924/148‑1 (MQ=255) aaagaagggaaaaaaG‑GAAAAATTCTAAAAAAAGGGGTTATCT‑AAGAGATTAGG‑ATTGGGG‑AAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCa < 1:1212791/141‑1 (MQ=255) gACAGAAAAAAAG‑GAAAAATCCTCAAAAAATGCGGTAATT‑TAAAAATTAGG‑ATTGGGG‑AAAATAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAAt < 1:1008343/150‑1 (MQ=255) cAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTCCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCt > 1:684761/1‑150 (MQ=255) aGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGCAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑TCGACGTTCTCATAGAGTAATCTCCGGATATCGACCCATAAAGGGCAATGATAAAAGGAGTACCCTGTGAAAAAGATGCAATCTa > 2:1031834/1‑150 (MQ=255) ggaaaaaaG‑GAAAAATTCTAAATAAATGCGGTATTT‑TAGAGTTTAGA‑TTTGCGG‑AAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATc < 1:326578/148‑1 (MQ=255) gAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGt > 1:67190/1‑151 (MQ=255) aaaaaG‑GAGAAATTCTAAATAAATGGGGTAACT‑TAGAGATTAGG‑ATGGGGA‑AAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTa < 1:27418/151‑1 (MQ=255) aaaaaG‑GAGAAATTCTAAATAAAGGTGTTAACT‑AAAAGATTGGG‑ATTGCGA‑AAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATc < 2:108896/144‑1 (MQ=255) aaaaaG‑GAAAAATTCTCAATAAATGCGTTAACT‑TAGAGATTAGG‑ATTGGGG‑AAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGt < 1:797141/150‑1 (MQ=255) aaaaaG‑AAAAAATTCTCAATAAGGGCGGTAATT‑TAGAAATTGGG‑ATGGGGG‑AAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGt < 2:380592/150‑1 (MQ=255) aG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCg > 1:1141880/1‑151 (MQ=255) gagaAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTc > 2:384767/1‑148 (MQ=255) aaaaaTTCTAAAAAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCAc < 1:13761/149‑1 (MQ=255) gaAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACt > 1:1093323/1‑151 (MQ=255) gaAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACt > 1:753311/1‑151 (MQ=255) aaaTTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACtt > 2:619181/1‑151 (MQ=255) aaTTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACttt > 2:441976/1‑151 (MQ=255) ttCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTcc > 1:1228039/1‑151 (MQ=255) tctcAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTccc > 1:20832/1‑151 (MQ=255) ctcAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCACt > 2:55031/1‑151 (MQ=255) tcAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTg > 1:961236/1‑151 (MQ=255) aaaTAAATGATTTGACA‑TAAAGTTTAGG‑ATTGGGG‑AAAAAAACAC‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTg < 2:725484/149‑1 (MQ=255) aaaaaaaGCGGAAATT‑AAGAG‑TTAGG‑GATGCGGAAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTg < 2:1217761/146‑1 (MQ=255) aaaaaTGCGGTAATT‑AAGAGATTAGG‑TTGGGGG‑AAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGtt < 1:1210975/149‑1 (MQ=255) aTAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGtt > 2:1120604/1‑151 (MQ=255) aattGCGTTAATT‑TAGAGATTAGG‑TTTGCGG‑AAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTg < 1:762644/143‑1 (MQ=255) aaaTGCGGTAATT‑TAGAGATTAGG‑ATGGCGG‑AAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTc < 1:411138/150‑1 (MQ=255) gCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CAGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTAGCACTTTACCTGGTTCTGGTc > 1:486406/1‑151 (MQ=255) t‑tAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGATCTGGTCGCTCCCAt > 1:147046/1‑151 (MQ=255) aTTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgcagc > 1:964482/1‑151 (MQ=255) ttAGG‑ATGGGGA‑AAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATg < 1:312499/145‑1 (MQ=255) tggg‑ATGGCGG‑AAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATTATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACGCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgcagca < 2:53047/148‑1 (MQ=255) g‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAgg > 2:261459/1‑151 (MQ=255) ggttGCGA‑AGAAAAAATA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCGCTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAg < 2:1222273/148‑1 (MQ=255) cGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCg > 1:920573/1‑151 (MQ=255) g‑agaATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCgg > 1:1058571/1‑150 (MQ=255) aTAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAAtt > 1:650934/1‑151 (MQ=255) tAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAAtt > 1:91228/1‑150 (MQ=255) | CATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAG‑GAGAAATTCTCAATAAATGCGGTAACT‑TAGAGATTAGG‑ATTGCGG‑AGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATT > NC_000913/5012‑5311 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |