| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,001,918 | 0 | A | C | 40.7% | 96.8 / 12.7 | 59 | intergenic (‑129/+192) | fliA/fliC | RNA polymerase, sigma 28 (sigma F) factor/flagellar filament structural protein (flagellin) |
| Reads supporting (aligned to +/- strand): ref base A (32/3); new base C (0/24); total (32/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.35e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTATAGAGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGG > NC_000913/2001772‑2002065 | ggTATAGAGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAAccc < 1:139545/150‑1 (MQ=255) gTATAGAGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAACAACCccg < 1:190690/151‑1 (MQ=255) ataGAGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCccgcc > 2:134151/1‑151 (MQ=255) ataGAGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCccgc < 2:839798/150‑1 (MQ=255) agagTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCgg > 2:63139/1‑151 (MQ=255) gggTGAATTCCCGATAAACGGCCCTGGGTTATAGGGGTTATGGGGAGGATTATCGGTTGCTGCGGGGTTTTTAAGGGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAACCCccgccg < 1:740440/147‑1 (MQ=255) gAATTCACGATAAACAGCCCTGCGTTATATGAGTTCTCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGGGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCGAGG‑CAGAAAAAAACCCCGCCGGTGGCg > 1:12640/1‑151 (MQ=255) aTTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCggg > 2:540358/1‑151 (MQ=255) cACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGa > 2:318224/1‑150 (MQ=255) aCGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGa > 2:197907/1‑149 (MQ=255) cGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAg > 1:115010/1‑150 (MQ=255) tAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGCTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTATAGGTAAATTCCCGG‑CAGAAAAAAATCACGCCGGTGGCGGGGAAGCAc > 1:902690/1‑150 (MQ=255) ccTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGAc > 1:37944/1‑151 (MQ=255) ttttatgatttcggggCTTGTTTTTCCTTTTTTGCGGGGTTTTTAAGCGGAGGTTTAGGGGGTGAAA‑GGGGGGTTTTTTGGGGTT‑TTACAGTTAATTCCCAGG‑AAGAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACaaa < 2:341018/134‑1 (MQ=255) atatGAGTTATCGGCATGATTATCCGTTTCTGCAGGTTTTTTAATCGGACGATTAGTGGGTAAAATGAGGGGTTATTGGGGG‑G‑TTACAGGAAAATTCCAGG‑CAGAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTgc < 2:594828/150‑1 (MQ=255) atGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCt > 1:388957/1‑151 (MQ=255) tGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCtt > 2:163763/1‑151 (MQ=255) gAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGAGCttt > 1:505627/1‑151 (MQ=255) aGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGGGGCGGGGAAGCACGTTGCTGACAAATTGCGCtt > 2:834920/1‑149 (MQ=255) ttATCGGCTTGATTATCCGTTTCTGCGGGGTTTTTAATCGGACAATTAGTGGGTGAAAGGAGGGGTTATTTGGGG‑G‑TTACAGGTAATTTCCAGA‑AAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTa < 1:681153/149‑1 (MQ=255) tCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGCAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCCCGTTGCTGACAAATTGCGCTTTATGtgg > 1:954595/1‑149 (MQ=255) ttATCTTTTTCTGCGGGTTTTTTAACAGGGCGTTAGGGGGGTGAAAAGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATCCCAGG‑CAAAAAAACCCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGAt < 1:25115/148‑1 (MQ=255) tttCCGTTTCGGGTGGTTTTTAAATCGGACGATTGGGGGTTGAAATGGGGGGTTATTTGGGG‑T‑TAAGAGGAAAATTCCAGG‑AAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATgcg < 1:933727/148‑1 (MQ=255) aTCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATgcgg > 1:95368/1‑150 (MQ=255) tttCTGCAGGTTTTTTAATCGAACGATTAGTGGGTAAAATGAGGGGTTTTTGGGGG‑T‑TTACGGGAAAATTCCAGG‑CAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGt < 2:215615/148‑1 (MQ=255) gCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCt > 2:223229/1‑151 (MQ=255) cAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCtt > 1:370516/1‑151 (MQ=255) ttttAATCGGACGATTAGGGGGTGAAATGAGGGTTTTTTTGGGG‑G‑TTACAGGTAAATCCCAGG‑AAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCg < 1:846745/150‑1 (MQ=39) aaTCGGACGATTAGTGGGTGCAATGAGGGGCTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGCTGCGGCGTAAACGCCTTATCCGGCCt > 1:655325/1‑150 (MQ=255) aaTCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCt > 1:81311/1‑150 (MQ=255) ggACGATTGGTGGGTGAAATGAGGGGTTTTTTGGGG‑G‑TTACAGGTAAATCCCAGC‑AAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc < 1:318035/148‑1 (MQ=38) ggACGATTAGGGGGTAAAAGGGGGGTTTATTGGGGG‑G‑TTACAGTTAAATCCCAGG‑CAGAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACaaa < 2:530724/151‑1 (MQ=37) tAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGc > 2:359565/1‑151 (MQ=255) cttGGGTGAAATGAGTGGTTATTTCGGG‑G‑TTTCAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCTGGGAAGGACGTTGCTGACATAATGCGCTTTATGTTGCCTGATGCGGCGTAAACGCCTTATACGGCCTACaaaaa > 1:470133/3‑145 (MQ=38) ggggTGAAAGGGGGGGTTATTTGGGG‑G‑TTACAGGTAATTTCCGGC‑CAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCaa < 1:720582/149‑1 (MQ=38) tGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTc > 1:784222/1‑150 (MQ=255) aatgggggttttttttGGGG‑G‑TTACAGGTAAATCCCAGA‑CAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAAt < 1:914781/138‑1 (MQ=37) aaaTGAGGGGTTTTTTGGGG‑G‑TTACAGG‑AAATTCCCGGCCAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAAt < 2:313048/151‑1 (MQ=37) aaaTGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAAt > 1:506077/1‑151 (MQ=255) aaaTGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAAt > 1:856994/1‑151 (MQ=255) aaTGAGGGTTTTTTTGGGG‑G‑TTAAAGTTAAATTCCAGG‑CAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATa < 1:970423/151‑1 (MQ=37) gAGGGTTTATTGGGGG‑T‑TTACAGGAAAATCCCAGG‑AAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAAt < 2:490453/151‑1 (MQ=37) gAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAAt > 1:252850/1‑151 (MQ=255) ggggTTATTGGGGG‑G‑TTACAGGTAAATCCCAGG‑CAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTg < 2:324371/151‑1 (MQ=255) ggggTTATTGGGGG‑G‑TTACAGGTAAATCCCAGG‑AAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTg < 2:727769/151‑1 (MQ=37) gggTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGc > 2:233526/1‑151 (MQ=255) ttATGTGGGG‑T‑ATACAGTTAACTTCCAGC‑CAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGc < 1:473194/148‑1 (MQ=25) tttttGGGG‑GTTTACAGGTAAATTCCAGG‑CAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCaa < 2:37952/148‑1 (MQ=255) aTTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAAtt > 1:774352/1‑150 (MQ=255) ttggggg‑g‑TTACAGGTAAATCCCAGG‑CAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAAt < 2:243331/145‑1 (MQ=255) gggg‑g‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACt > 2:137176/1‑151 (MQ=255) tACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAgg > 1:363345/1‑151 (MQ=255) aattcccggg‑CAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCt < 2:972741/139‑1 (MQ=255) aaaTTCCAGG‑AAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATa < 1:420417/151‑1 (MQ=255) aaTTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATa > 2:248969/1‑150 (MQ=255) aaTTCCAGG‑CAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGcc < 1:771889/145‑1 (MQ=255) gg‑CAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagcgca < 1:197795/149‑1 (MQ=255) g‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagcgcagcg > 1:110942/1‑151 (MQ=255) aGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagcgcagcgc > 1:647260/1‑150 (MQ=255) aaaaaaaCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATc > 2:465150/1‑151 (MQ=255) aaaaacCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCa < 2:126721/151‑1 (MQ=255) aaaaaCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAg < 1:721833/151‑1 (MQ=255) aaaaCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAgg < 1:63118/151‑1 (MQ=255) | GGTATAGAGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTTGGGG‑G‑TTACAGGTAAATTCCAGG‑CAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGG > NC_000913/2001772‑2002065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |