Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913366,5260TG39.3% 89.5 / 21.0 58T329P (ACC→CCC) lacIlactose‑inducible lac operon transcriptional repressor
Reads supporting (aligned to +/- strand):  ref base T (8/26);  new base G (22/0);  total (32/26)
Fisher's exact test for biased strand distribution p-value = 3.66e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGATATAACATGA  >  NC_000913/366379‑366673
                                                                                                                                                    |                                                                                                                                                     
aGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGggtggt                                                                                                                                                    <  1:776343/151‑1 (MQ=255)
   cTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGGTTTTGGCGGCAGGGGGGgttt                                                                                                                                                 >  1:96740/1‑151 (MQ=255)
    tGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGGATTGGGGGCCCGGGGGGgtttt                                                                                                                                                >  2:955054/1‑151 (MQ=255)
      gggTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCACTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTttttct                                                                                                                                              <  1:382674/151‑1 (MQ=255)
       ggTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTttttctt                                                                                                                                             <  2:1021114/151‑1 (MQ=255)
           ccTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTTCGTATTTGGCGCCAGGGGGGGttttctttt                                                                                                                                           >  2:587431/1‑149 (MQ=255)
             tAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACATGAATTCCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGGTTGTGCGTTGGGGGCCAGGGAGGTgtttcttttttc                                                                                                                                        >  1:164263/1‑147 (MQ=255)
              aaTGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTTGGGATTTGGCGCCAGGGGGGGTTTTCTTTTTAc                                                                                                                                        >  2:387416/1‑149 (MQ=255)
              aaTGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTTTTTGGGGCCCGGGGGGGttttttttttccc                                                                                                                                       >  1:875452/1‑146 (MQ=255)
               aTGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTTGGGGCCAGGGGGGGTTTTTTTTTTAcc                                                                                                                                       >  2:313090/1‑149 (MQ=255)
               aTGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAg                                                                                                                                     <  2:540225/151‑1 (MQ=255)
                   gtgagCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGGTTTGGGACTTGGTGCCCCGGGGGGTTTTTTTTTTACCCAgg                                                                                                                                    >  1:238381/1‑148 (MQ=255)
                      agCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTGTGTGTCGTTGGGGCCAGGGGGGGttttctttttccgacagag                                                                                                                                 >  1:439994/1‑138 (MQ=255)
                           aCTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCaa                                                                                                                        <  2:993857/151‑1 (MQ=255)
                                    aaTTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGGTTGCGTATTGGGCGCCCGGGTGGGTTTTCTTTTTCCCCGGGAGACGGGCAACAGCCGAtt                                                                                                              >  1:141918/1‑151 (MQ=255)
                                      ttgcgttgcgCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGGTTTGGGGGCCAAGGGGGGTTTTTTTTTCACCCGGGAGACGGGGAACCGcgtatt                                                                                                              >  1:651802/1‑144 (MQ=255)
                                        gcgttgcgCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTTGGGGCGAGGGGGGGTTTTTTTTTTACCCGAGAGGCgggggcccgctgcttg                                                                                                              >  1:281133/1‑135 (MQ=255)
                                           ttgcgCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCtt                                                                                                        <  1:594255/150‑1 (MQ=255)
                                              cgcTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCAc                                                                                                     <  1:310226/150‑1 (MQ=255)
                                                   aCTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTTCGTGATGGGGGCCCGGGGGGGTTTTTTTTTTACCCGGGAGACGGGGAACCGCGGATTGCCCTTCcccccc                                                                                                 >  1:405247/1‑149 (MQ=255)
                                                               ccAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTTGGGGCCCGGGGGGGTTTTTTTTTTTCCCGTGGGGCGGGGAAAAGCTGGTTTGCCTTCCCCCCCTGGGCCTgaggg                                                                                     >  1:265460/1‑147 (MQ=255)
                                                                       gAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTTCGTAATGGGCGCCAGGGGGGGTTTTCTTTTTACCCGGGAGGCGGGCCACCGAGGGCTTGCCCTCTCCGCCTGGCCCTCAGAGAGTTtca                                                                              >  1:686345/1‑148 (MQ=255)
                                                                         aaCCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAg                                                                         <  2:599211/151‑1 (MQ=255)
                                                                           ccTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGc                                                                        <  1:517242/150‑1 (MQ=255)
                                                                            cTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGTGTATTTGGCGCCAGGGGGGGTTTTTTTTTCACCAGGGAGACGGGGAACAGCTGATTGCCCTTTACCGCCTTGCCCCGGGAGAGGTGGAGCAAACgg                                                                      >  2:189237/1‑151 (MQ=255)
                                                                                cGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCa                                                                  <  2:692611/151‑1 (MQ=255)
                                                                                     cAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGGATTTGGGGCCAGGGGGGTTTTTCTTTTCACCAGGGAGACGGGCAACAGCTGATTGCCCCTCCCCCCCTCGGCCTGAGAGAGGTGCGGCAAGAGGTGCCCGc                                                               >  1:46945/1‑149 (MQ=255)
                                                                                      aGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGCTTTGGTATTGGGTGCCAGGGGGGGTTTTCTTTTCGCCAGGGAAACGGGCAACAGCTTGTTCCACTTCACCGCCCGGGCCTGAGAGAGGTGAAGCAAGCGGTCCAccttgg                                                            >  2:220076/1‑146 (MQ=255)
                                                                                           cATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTTCGTATTTGGCGCCAGGGGGGGTTTTTTTTTTACCAGTGAGACGGGGAACAGCTGATTGCCCTTCACCCCCTGGCCCTGAGAGAGGTGCAGCAAGCGGGCCACCCTGGttt                                                         >  2:943590/1‑149 (MQ=255)
                                                                                           cATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGATTGCGTTTTTGGTGGCCGGGGGGGTTTTCTTTTTATCCGTGGGAAGGGCAACAGAAGATTGCCCCTCACCGCCTCGGCCTGAGAGGGTTGCGGCAAGAGGGccc                                                                  >  1:407099/1‑139 (MQ=255)
                                                                                               aaTGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCca                                                   <  2:680020/151‑1 (MQ=255)
                                                                                                 tGAATCGGCCAACGCGCGGGGAGAGGCGGTTTTCGGTTTTGGCGCCCGGGGGGGTTTTTTTTTTACCCGTGAGACGGGCAACAACTGATTGCCCTTCACCGCCCGGCCCTGGGAGAGTTGCAGCAAGCGGTCCACGCTGGGTTTcccc                                                    >  2:740973/1‑148 (MQ=255)
                                                                                                  gAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCcagca                                                <  1:800022/151‑1 (MQ=255)
                                                                                                   aaTCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCCGGGGGGTTTTTCTTTTCACCAGGGAGGCGGGCCACAAGTGATTGCCCTTCACCGCCTGGCCCTGAGGGAGGTTTAGCAAGCAGTCCACCCTGGGTTGTCCcacc                                                 >  1:311805/1‑147 (MQ=255)
                                                                                                    aTCGGCCAACGCGCGGGGAGAGGCGGATTTCGTGTTTGGGGGCCGGGGGGTTTTTTTTTTTCCCCGTGAGACGGGGCAACACTGGTTTTCCCTTCCCCCCCCGCCCTGAGAGAATTGCGACCAATGGGCCACGCACGGTTGcccc                                                    >  2:903045/1‑145 (MQ=255)
                                                                                                      cGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCg                                            <  2:869500/151‑1 (MQ=255)
                                                                                                      cGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCg                                            <  2:640530/151‑1 (MQ=255)
                                                                                                       ggCCAACGCGCGGGGAGAGGCGGTTGGCGTATTGGGCGCCAGGGTGTTTTTTCTTTTCTCCAGTGAGACGCGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGgaga                                           <  2:516126/151‑1 (MQ=255)
                                                                                                         ccAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGaaa                                         <  1:803380/151‑1 (MQ=255)
                                                                                                           aaCGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTGCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCGCCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAAt                                       <  1:713414/151‑1 (MQ=255)
                                                                                                            aCGCGCGGGGAGAGGCGGTTTGGGGGTTGGGGGCCCCGGGGGTTTTTCTTTTCACCAATGAGACGGGCAACAGCTGATTGGCCTTCACCCCCTGGCCCTTTGAGAGTTTCAGCAAGCGGGCCACGCCGGGTTGCCCCACCAGGCggaca                                        >  1:640834/1‑145 (MQ=255)
                                                                                                                       gagGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGAtgg                           <  1:664996/151‑1 (MQ=255)
                                                                                                                       gagGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGAtgg                           <  2:455535/151‑1 (MQ=255)
                                                                                                                        agGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGAtggt                          <  1:46583/151‑1 (MQ=255)
                                                                                                                         ggCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGAtggtg                         >  1:877002/1‑151 (MQ=255)
                                                                                                                           cGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATggtggt                       >  2:308070/1‑151 (MQ=255)
                                                                                                                             ggTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGtt                      <  2:384566/151‑1 (MQ=255)
                                                                                                                             ggTGTGCGCATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGtt                      >  1:808661/1‑151 (MQ=255)
                                                                                                                              gTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTa                     <  1:871342/151‑1 (MQ=255)
                                                                                                                                 tGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAAcg                  >  2:837680/1‑151 (MQ=255)
                                                                                                                                 tGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAAc                   <  1:83011/150‑1 (MQ=255)
                                                                                                                                   cGTATTGGGCGCCATGTTGTTTTTTCTTTTCACCAGTGAGACGGCCAACAGCTGATTGCCCTTCACCGCCTGTCCCTGAGATAGTTGCAGCAAGCTGTCCACTCTCGTTTGCCCCAGCACTCGAAAATCCTATTTAAttctccttaactt                 <  1:323393/150‑13 (MQ=255)
                                                                                                                                        tGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCggg             <  2:949153/149‑1 (MQ=255)
                                                                                                                                        tGGGCGCCAGGGCGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCggg             >  1:357718/1‑149 (MQ=255)
                                                                                                                                         gggCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGat           <  1:249401/150‑1 (MQ=255)
                                                                                                                                              ccAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGATATaa       >  2:588308/1‑149 (MQ=255)
                                                                                                                                                aGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGGTATaaaa     >  2:552171/1‑147 (MQ=255)
                                                                                                                                                 gggTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGGTATaa       >  1:779901/1‑146 (MQ=255)
                                                                                                                                                 gggTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGATATAACATGa  <  2:598286/151‑1 (MQ=255)
                                                                                                                                                  ggtggtTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGGTATAAc      >  1:224092/1‑146 (MQ=255)
                                                                                                                                                   gtggtTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGatatta       >  2:789421/1‑142 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
AGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGATATAACATGA  >  NC_000913/366379‑366673

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: