Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,782,626 IS5 (–) +4 bp coding (98‑101/4581 nt) ypjA ← adhesin‑like autotransporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)69 (1.260) 51/298 0.2 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 2782629 0 (0.000)coding (98/4581 nt) ypjA adhesin‑like autotransporter
* ? NC_000913 = 2290113NA (NA)49 (0.900) 42/298 0.5 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 2782626 = 0 (0.000)coding (101/4581 nt) ypjA adhesin‑like autotransporter

Only 100 of 110 total aligned reads displayed.

TATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTT  >  NC_000913/2782476‑2782775
                                                                                                                                                      |                                                                                                                                                     
tatCCACCAGATTCAATAAGCCTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACAt                                                                                                                                                       >  2:91827/1‑151 (MQ=255)
 atCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGTCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACAtt                                                                                                                                                      >  2:88965/1‑151 (MQ=255)
   ccaccaGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATta                                                                                                                                                     <  1:402509/150‑1 (MQ=255)
      acaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTtagtag                                                                                                                                                 <  1:671223‑M2/7‑1 (MQ=255)
       caGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGgga                                                                                                                                                 <  2:267769‑M2/150‑4 (MQ=255)
         agaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTg                                                                                                                                               >  2:321519‑M2/142‑150 (MQ=255)
         agaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTg                                                                                                                                               >  2:497860‑M2/142‑150 (MQ=255)
          aTTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggt                                                                                                                                             <  2:682482‑M2/151‑8 (MQ=255)
          aTTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaagg                                                                                                                                              <  1:611810‑M2/150‑7 (MQ=255)
            tCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgc                                                                                                                                           <  1:382074‑M2/151‑10 (MQ=255)
                 aaGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaat                                                                                                                                       <  1:729729‑M2/150‑14 (MQ=255)
                   ttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCAt                                                                                                                                    >  2:107991‑M2/132‑151 (MQ=255)
                      ttCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcgg                                                                                                                                 <  2:202609‑M2/151‑20 (MQ=255)
                      tctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATccc                                                                                                                                 >  1:275802‑M2/129‑151 (MQ=255)
                       ctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATccc                                                                                                                                 >  2:827915‑M2/128‑150 (MQ=255)
                         ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCcg                                                                                                                                <  1:181202‑M2/24‑1 (MQ=255)
                          aTTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTGTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcgggg                                                                                                                               >  2:751909‑M2/1‑128 (MQ=255)
                           ttATATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcg                                                                                                                                  >  2:443211‑M2/1‑127 (MQ=255)
                              gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCcgggcggg                                                                                                                          <  1:333119‑M2/30‑1 (MQ=255)
                              gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCcgggcggg                                                                                                                          <  1:846675‑M2/30‑1 (MQ=255)
                              gATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaat                                                                                                                           >  2:408699‑M2/1‑124 (MQ=255)
                               aTACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattc                                                                                                                         >  1:53313‑M2/1‑123 (MQ=255)
                                  gcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCata                                                                                                                     <  2:828199‑M2/35‑1 (MQ=255)
                                  ccccGCCCTGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttct                                                                                                                     <  2:600062‑M2/151‑32 (MQ=255)
                                  ccccGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattctt                                                                                                                       >  1:192106‑M2/1‑120 (MQ=255)
                                      gCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggc                                                                                                                 <  2:202042‑M2/151‑36 (MQ=255)
                                       ccATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggct                                                                                                                >  2:693174‑M2/1‑115 (MQ=255)
                                       ccATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggct                                                                                                                <  1:830590‑M2/151‑37 (MQ=255)
                                        cATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggct                                                                                                                >  2:668756‑M2/1‑114 (MQ=255)
                                              gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGa                                                                                                         <  2:813436‑M2/47‑1 (MQ=255)
                                              cATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcag                                                                                                         >  1:705999‑M2/1‑108 (MQ=255)
                                               aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgccccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGat                                                                                                        <  1:535037‑M2/48‑1 (MQ=255)
                                               aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGc                                                                                                            >  1:14475‑M2/104‑147 (MQ=255)
                                                       gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgccaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATaa                                                                                                <  1:86166‑M2/56‑1 (MQ=255)
                                                       ggCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat                                                                                                <  1:109149‑M2/151‑53 (MQ=255)
                                                          ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAgg                                                                                              >  1:821800‑M2/93‑150 (MQ=255)
                                                           gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGaa                                                                                            <  1:70743‑M2/60‑1 (MQ=255)
                                                            tGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt                                                                                           <  1:770058‑M2/151‑58 (MQ=255)
                                                               ttGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcat                                                                                        <  1:355123‑M2/151‑61 (MQ=255)
                                                               ttGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcat                                                                                        <  1:52439‑M2/151‑61 (MQ=255)
                                                                ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTAc                                                                                       >  1:1344‑M2/87‑151 (MQ=255)
                                                                   taataTGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtt                                                                                     >  2:570881‑M2/1‑87 (MQ=255)
                                                                         gAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccg                                                                              >  2:109339‑M2/1‑81 (MQ=255)
                                                                         gAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcc                                                                               >  1:273250‑M2/1‑81 (MQ=255)
                                                                          tgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAgcggcg                                                                              >  2:213712‑M2/77‑150 (MQ=255)
                                                                             ctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACa                                                                           >  2:576655‑M2/74‑150 (MQ=255)
                                                                              ttATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggggcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt                                                                         <  1:539977‑M2/151‑76 (MQ=255)
                                                                               tATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt                                                                         >  1:640456‑M2/1‑75 (MQ=255)
                                                                                  gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACaataat                                                                      <  1:108014‑M2/82‑1 (MQ=255)
                                                                                  gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAataata                                                                     <  2:840231‑M2/83‑1 (MQ=255)
                                                                                  gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAataata                                                                     <  2:770850‑M2/83‑1 (MQ=255)
                                                                                   tgttgtACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct                                                                     >  1:648025‑M2/1‑71 (MQ=255)
                                                                                   atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAg                                                                    <  1:363366‑M2/84‑1 (MQ=255)
                                                                                     gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAggg                                                                  >  1:656839‑M2/66‑151 (MQ=255)
                                                                                        tACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                                <  2:392565‑M2/150‑85 (MQ=255)
                                                                                        tACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                                <  1:776722‑M2/150‑85 (MQ=255)
                                                                                        ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACt                                                               <  1:97230‑M2/89‑1 (MQ=255)
                                                                                            gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTc                                                           >  1:66645‑M2/59‑151 (MQ=255)
                                                                                             cGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat                                                            >  2:729545‑M2/1‑61 (MQ=255)
                                                                                                tCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTTCCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcgactgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct                                                        >  1:58691‑M2/1‑58 (MQ=255)
                                                                                                 atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGtt                                                      >  1:330984‑M2/54‑151 (MQ=255)
                                                                                                   ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTc                                                     <  1:392148‑M2/99‑1 (MQ=255)
                                                                                                     cACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc                                                  <  2:500989‑M2/151‑99 (MQ=255)
                                                                                                       ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATaaa                                                <  1:712001‑M2/104‑1 (MQ=255)
                                                                                                         ttttGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcc                                              <  2:90568‑M2/151‑103 (MQ=255)
                                                                                                           ttGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcct                                             <  1:107072‑M2/150‑104 (MQ=255)
                                                                                                             gacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCa                                           <  1:278131‑M2/109‑1 (MQ=255)
                                                                                                                tGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattta                                        >  1:15550‑M2/1‑42 (MQ=255)
                                                                                                                tGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattta                                        >  1:430777‑M2/1‑42 (MQ=255)
                                                                                                                aaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCct                                       >  1:170637‑M2/39‑151 (MQ=255)
                                                                                                                  ccATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagac                                     >  1:468734‑M2/1‑40 (MQ=255)
                                                                                                                  acatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCctct                                     <  2:354760‑M2/115‑1 (MQ=255)
                                                                                                                       tACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgttt                                <  1:52765‑M2/151‑117 (MQ=255)
                                                                                                                       atctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGaaa                                 >  2:149562‑M2/32‑150 (MQ=255)
                                                                                                                        aCAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtt                                 >  1:409145‑M2/1‑34 (MQ=255)
                                                                                                                         cAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttct                              <  1:242642‑M2/151‑119 (MQ=255)
                                                                                                                           gTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc                            >  1:202298‑M2/1‑31 (MQ=255)
                                                                                                                           catatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGaaaa                                <  1:809931‑M2/120‑1 (MQ=255)
                                                                                                                            tctcATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcg                           <  2:382039‑M2/151‑122 (MQ=255)
                                                                                                                              tcATTGTTTAACACACCAATAATATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcctcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc                         <  2:823176‑M2/151‑124 (MQ=255)
                                                                                                                              atcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATa                         <  1:432383‑M2/127‑1 (MQ=255)
                                                                                                                               tcagggacttgttcgctccttccTTAGTAGTGAAGGCAGACATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCGCTGAAAAGTGAATa                         <  2:701652‑M2/127‑1 (MQ=255)
                                                                                                                               cATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcca                        >  1:605361‑M2/1‑27 (MQ=255)
                                                                                                                               cATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgc                          >  2:252980‑M2/1‑27 (MQ=255)
                                                                                                                                 agggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTg                      <  2:454353‑M2/130‑1 (MQ=255)
                                                                                                                                 agggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTg                      <  2:430322‑M2/130‑1 (MQ=255)
                                                                                                                                  gggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTg                      >  1:186763‑M2/21‑150 (MQ=255)
                                                                                                                                   gTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                    >  1:699095‑M2/1‑23 (MQ=255)
                                                                                                                                   gTTTACCACACCAATAACATTAGgcaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgcttcttcgccattt                     <  2:433927‑M2/150‑128 (MQ=255)
                                                                                                                                      tACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagg                 <  2:625752‑M2/151‑132 (MQ=255)
                                                                                                                                          acacCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattccatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtt             <  1:313334‑M2/151‑136 (MQ=255)
                                                                                                                                            cgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGttt            <  1:161993‑M2/140‑1 (MQ=255)
                                                                                                                                             ccaccttccTTAGTCGTGAAGGCAGCCATCCCGGGCGGGGCATCTATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGttt            >  2:600265‑M2/10‑149 (MQ=255)
                                                                                                                                              caccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTa           >  2:394165‑M2/9‑149 (MQ=255)
                                                                                                                                              cAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcc         >  2:357829‑M2/1‑12 (MQ=255)
                                                                                                                                                  aaCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccca      >  1:250961‑M2/1‑8 (MQ=255)
                                                                                                                                                  aaCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccca      >  1:268027‑M2/1‑8 (MQ=255)
                                                                                                                                                   tccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGa      <  1:308434‑M2/146‑1 (MQ=255)
                                                                                                                                                    cATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtt   <  1:720825‑M2/151‑146 (MQ=255)
                                                                                                                                                     aTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt  <  2:237753‑M2/151‑147 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
TATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTT  >  NC_000913/2782476‑2782775

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.