Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,751,884 IS5 (+) +4 bp intergenic (‑16/‑105) yiaT ← / → yiaU putative outer membrane protein/putative DNA‑binding transcriptional regulator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2290113NA (NA)57 (1.250) 48/298 0.1 98.2% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 3751887 1 (0.020)intergenic (‑19/‑105) yiaT/yiaU putative outer membrane protein/putative DNA‑binding transcriptional regulator
* ? NC_000913 3652036 =NA (NA)48 (1.050) 41/298 0.3 97.9% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 3751884 = 1 (0.020)intergenic (‑16/‑108) yiaT/yiaU putative outer membrane protein/putative DNA‑binding transcriptional regulator

Only 100 of 101 total aligned reads displayed.

TTCGTATTTTCATTATAACCGCGATAAGGCGATTCATTATAAGCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATTATATATAATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTAT  >  NC_000913/3751735‑3752032
                                                                                                                                                     |                                                                                                                                                    
ttCGTATTTTCATTATAACCGCGATAAGGCGATTCATTATAAGCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCAtttt                                                                                                                                                     >  2:361588/1‑151 (MQ=255)
 aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcctt                                                                                                                                                     >  2:686495‑M2/149‑150 (MQ=255)
 aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcctt                                                                                                                                                     <  2:229592‑M2/2‑1 (MQ=255)
 aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcct                                                                                                                                                      <  2:577861‑M2/1‑1 (MQ=255)
    tATTTTCATTATAACCGCGATAAGGCGATTCATTATAAGCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAgg                                                                                                                                                 <  1:26023‑M2/151‑3 (MQ=255)
       tttCATTATAACCGCGATAAGGCGATTCATTATAAGCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaa                                                                                                                                               >  2:34250‑M2/1‑146 (MQ=255)
       tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATa                                                                                                                                               >  1:476168‑M2/143‑150 (MQ=255)
        ttCATTATAACCGCGATAAGGCGATTCATTATAAGCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaag                                                                                                                                              >  2:449762‑M2/1‑145 (MQ=255)
         gggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGa                                                                                                                                            <  2:42421‑M2/11‑1 (MQ=255)
          ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGAt                                                                                                                                           <  1:541069‑M2/12‑1 (MQ=255)
          cATTATAACCGCGATAAGGCGATTCATTATAAGCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggt                                                                                                                                            >  2:466887‑M2/1‑143 (MQ=255)
              ataACCGCGATAAGGCGATTCATTATAAGCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTTCGATTAATTAACATGTCCGGTATTCCATTTTAGggaaggtgcga                                                                                                                                        <  1:62966‑M2/150‑12 (MQ=255)
              ataACCGCGATAAGGCGATTCATTATAAGCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAAATAAGATaaaa                                                                                                                                       <  1:183144/151‑1 (MQ=255)
              aacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctgaaacatgaagaaatgaaatggctgagtcagccgagaagaatttccccgcttattcgcgccttccTTAAAATAAGATaaa                                                                                                                                        <  2:340567‑M2/15‑1 (MQ=255)
              aacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATaaa                                                                                                                                        >  2:440560‑M2/136‑150 (MQ=255)
                aaCCGCGATAAGGCGATTCATTATAAGCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaaca                                                                                                                                     >  2:93493‑M2/1‑137 (MQ=255)
                aaCCGCGATAAGGCGATTCATTATAAGCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaac                                                                                                                                      >  1:711062‑M2/1‑137 (MQ=255)
                  ccGCGATAAGGCGATTCATTATAAGCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaag                                                                                                                                   >  2:245050‑M2/1‑135 (MQ=255)
                   cgcgATAAGGCGATTCATTATAAGCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagt                                                                                                                                  <  1:676147‑M2/151‑18 (MQ=255)
                     taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTc                                                                                                                                >  1:214796‑M2/129‑151 (MQ=255)
                     taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTc                                                                                                                                >  1:611739‑M2/129‑151 (MQ=255)
                        atggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGc                                                                                                                             <  2:383922‑M2/26‑1 (MQ=255)
                          aGGCGATTCATTATAAGCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgat                                                                                                                           >  1:203644‑M2/1‑127 (MQ=255)
                           gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCat                                                                                                                           >  1:504709‑M2/123‑150 (MQ=255)
                               agaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCataata                                                                                                                       >  2:431609‑M2/119‑150 (MQ=255)
                                   aTTATAAGCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatca                                                                                                                  >  1:456311‑M2/1‑118 (MQ=255)
                                   aTTATAAGCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatca                                                                                                                  >  1:382594‑M2/1‑118 (MQ=255)
                                    cggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCtt                                                                                                                 <  2:168939‑M2/38‑1 (MQ=255)
                                      gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTAc                                                                                                               <  1:511602‑M2/40‑1 (MQ=255)
                                        ctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACa                                                                                                              >  1:355612‑M2/110‑150 (MQ=255)
                                         taaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAAt                                                                                                            >  1:111936‑M2/109‑151 (MQ=255)
                                          gCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                           >  2:30854‑M2/1‑111 (MQ=255)
                                           aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAAttt                                                                                                          <  2:622926‑M2/45‑1 (MQ=255)
                                            cGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtc                                                                                                          <  1:55652‑M2/150‑42 (MQ=255)
                                             taggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTtct                                                                                                        >  2:239005‑M2/105‑151 (MQ=255)
                                              aggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAAgttcgc                                                                                                       <  2:174826‑M2/48‑3 (MQ=255)
                                               accagcaccaATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct                                                                                                      <  1:303250‑M2/151‑46 (MQ=255)
                                                gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCg                                                                                                     >  1:621409‑M2/102‑151 (MQ=255)
                                                  agcaccaATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct                                                                                                      <  2:424592‑M2/148‑46 (MQ=255)
                                                       caATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat                                                                                              <  2:420666‑M2/151‑54 (MQ=255)
                                                         aTGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag                                                                                            >  1:84566‑M2/1‑96 (MQ=255)
                                                             atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagctgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAgattga                                                                                         <  2:173385‑M2/62‑3 (MQ=255)
                                                               aaTTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                      >  1:340004‑M2/1‑90 (MQ=255)
                                                               aaTTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag                                                                                       >  2:402413‑M2/1‑90 (MQ=255)
                                                                tacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATAtt                                                                                     >  1:401281‑M2/86‑151 (MQ=255)
                                                                      agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTtatat                                                                                >  2:272118‑M2/80‑150 (MQ=255)
                                                                        aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGt                                                                             <  2:512237‑M2/74‑1 (MQ=255)
                                                                         cAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                                                                            >  1:147074‑M2/1‑80 (MQ=255)
                                                                          aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTaa                                                                           <  2:621465‑M2/76‑1 (MQ=255)
                                                                          aGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                           >  2:605562‑M2/1‑79 (MQ=255)
                                                                          aGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                           >  1:54657‑M2/1‑79 (MQ=255)
                                                                          aGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                                                                            <  1:478704‑M2/150‑72 (MQ=255)
                                                                             tGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt                                                                         >  2:553694‑M2/1‑76 (MQ=255)
                                                                               cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAatata                                                                       <  1:273612‑M2/80‑1 (MQ=255)
                                                                                ggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAatatat                                                                      >  1:621493‑M2/70‑150 (MQ=255)
                                                                                  ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATaa                                                                    >  2:563723‑M2/68‑150 (MQ=255)
                                                                                   tGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatca                                                                    >  2:664729‑M2/1‑70 (MQ=255)
                                                                                    caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATaaa                                                                   <  2:696127‑M2/84‑1 (MQ=255)
                                                                                    caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAAt                                                                 <  1:260211‑M2/86‑1 (MQ=255)
                                                                                      aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATta                                                               <  1:440712‑M2/88‑1 (MQ=255)
                                                                                        catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATtat                                                              >  2:417428‑M2/62‑150 (MQ=255)
                                                                                          aaaGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt                                                           >  2:115423‑M2/1‑63 (MQ=255)
                                                                                               cAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg                                                      <  2:431351‑M2/151‑94 (MQ=255)
                                                                                                aaCGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga                                                     >  2:218148‑M2/1‑57 (MQ=255)
                                                                                                 atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCTGTGCAAGATTCATATTTATATAGTAATATATAAAATTATATATAATTgg                                                    <  2:187124‑M2/99‑1 (MQ=255)
                                                                                                   gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATTATATATAATTGGGc                                                  <  2:499025‑M2/101‑1 (MQ=255)
                                                                                                    cAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt                                                 >  1:303202‑M2/1‑53 (MQ=255)
                                                                                                     aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATTATATATAATTGGGCTg                                                <  1:61886‑M2/103‑1 (MQ=255)
                                                                                                     aaaTAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg                                                <  1:685593‑M2/151‑100 (MQ=255)
                                                                                                      aaTAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg                                                <  1:452725‑M2/150‑100 (MQ=255)
                                                                                                            gCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag                                         >  1:436353‑M2/1‑45 (MQ=255)
                                                                                                              gtcagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATTATATATAATTGGGCTGTTGCGATGa                                       <  1:495656‑M2/112‑1 (MQ=255)
                                                                                                                cagccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATTATATATAATTGGGCTGTTGCGATGACa                                     <  2:172978‑M2/114‑1 (MQ=255)
                                                                                                                 agccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATTATATATAATTGGGCTGTTGCGATGACaa                                    <  2:270762‑M2/115‑1 (MQ=255)
                                                                                                                 aaTATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagta                                    >  2:203397‑M2/1‑40 (MQ=255)
                                                                                                                 aaTATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagta                                    >  1:127863‑M2/1‑40 (MQ=255)
                                                                                                                  atatTGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagta                                    <  2:127446‑M2/150‑112 (MQ=255)
                                                                                                                   ccgagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATTATATATAATTGGGCTGTTGCGATGACaaa                                   >  2:337552‑M2/35‑150 (MQ=255)
                                                                                                                     ttGCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcg                                <  2:706690‑M2/151‑116 (MQ=255)
                                                                                                                     gagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATTATATATAATTGGGCTGTTGCGATGACAAAAtt                                >  1:180583‑M2/33‑151 (MQ=255)
                                                                                                                     gagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATTATATATAATTGGGCTGTTGCGATGACAAAAtt                                <  1:67140‑M2/119‑1 (MQ=255)
                                                                                                                     gagaagaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATTATATATAATTGGGCTGTTGCGATGACAAAAtt                                <  1:80262‑M2/119‑1 (MQ=255)
                                                                                                                       gCGATTAATTAACATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgc                               >  2:55646‑M2/1‑34 (MQ=255)
                                                                                                                          gaatttccccgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATTATATATAATTGGGCTGTTGCGATGACAAAATTACAAc                           >  1:298689‑M2/28‑151 (MQ=255)
                                                                                                                            taattaaCATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc                           <  2:579737‑M2/149‑121 (MQ=255)
                                                                                                                             aattaaCATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga                        >  2:454979‑M2/1‑28 (MQ=255)
                                                                                                                             aattaaCATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc                           <  2:131713‑M2/148‑121 (MQ=255)
                                                                                                                               ttaaCATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc                      <  2:670475‑M2/151‑126 (MQ=255)
                                                                                                                                 aaCATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc                      <  2:85628‑M2/149‑126 (MQ=255)
                                                                                                                                   cgcttattcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATTATATATAATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTAcc                  >  1:514391‑M2/19‑151 (MQ=255)
                                                                                                                                   cATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaa                  >  1:661809‑M2/1‑22 (MQ=255)
                                                                                                                                   cATGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccaga                   <  2:320223‑M2/150‑129 (MQ=255)
                                                                                                                                    aTGTCCGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcggtaagcgccgtcagaccagaa                  <  2:331744‑M2/150‑130 (MQ=255)
                                                                                                                                        ccGGTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaag               <  2:404615‑M2/149‑133 (MQ=255)
                                                                                                                                        attcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATTATATATAATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCggg               <  2:86223‑M2/136‑1 (MQ=255)
                                                                                                                                          tcgcaccttccTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATTATATATAATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGt            >  2:533876‑M2/12‑150 (MQ=255)
                                                                                                                                           gTATTCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatt          >  2:438861‑M2/1‑14 (MQ=255)
                                                                                                                                               tCCATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc       >  2:615282‑M2/1‑10 (MQ=255)
                                                                                                                                                ccATTTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt     <  2:335984‑M2/151‑143 (MQ=255)
                                                                                                                                                   ttttAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc  <  2:524091‑M2/151‑146 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
TTCGTATTTTCATTATAACCGCGATAAGGCGATTCATTATAAGCCGCACCAGCACCAATGGATAATTCAGAAGCAGTTGCGCTTGCCATAAAAGGCAACGCAAATAACGCCACAATATTGCGATTAATTAACATGTCCGGTATTCCATTTTAAAATAAGATAAAAAAGAGTCGGCATAATAATGCTTACAATTTCTCCGGTGCAAGATTCATATTTATATAGTAATATATAAAATTATATATAATTGGGCTGTTGCGATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTAT  >  NC_000913/3751735‑3752032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.