Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 213,341 | 0 | A | G | 40.7% | 211.3 / 45.5 | 135 | G337G (GGA→GGG) | tilS | tRNA(Ile)‑lysidine synthetase |
Reads supporting (aligned to +/- strand): ref base A (13/67); new base G (55/0); total (68/67) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.26e-25 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 138 total aligned reads displayed.
GATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCG > NC_000913/213192‑213491 | gATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGaa < 1:435655/151‑1 (MQ=255) aCCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAggg > 2:286417/1‑144 (MQ=255) aCCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAg < 1:1097634/151‑1 (MQ=255) cccTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAg < 2:1779468/150‑1 (MQ=255) cccTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGc < 1:1956938/151‑1 (MQ=255) tACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATg < 2:372120/150‑1 (MQ=255) cGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGTGGACAGCTTTATGCgg > 2:653235/1‑151 (MQ=255) cGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGGGGAAAGCTTAATGCgg > 2:2045431/1‑151 (MQ=255) cGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCgg < 1:1819895/151‑1 (MQ=255) gTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGCGGGGGGAGTACAGCTTAATGgggg > 1:987856/1‑151 (MQ=255) gggCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGTGCAGCTTAAAGTgggggg > 2:1918348/1‑150 (MQ=255) gggCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAgg < 2:1551635/150‑1 (MQ=255) gggCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGc < 1:69662/151‑1 (MQ=255) cgTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGTACAGATTAATACgggggggg > 2:13642/1‑145 (MQ=255) cgTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGTAAAGACTAATGGGGGGGGCGata > 2:139155/1‑150 (MQ=255) gTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGGACAGCTTAATGCggggggggggatt > 2:1783751/1‑144 (MQ=255) gTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGGAAAGCTTAATGCGGGGGGGGAGAtt > 1:316204/1‑151 (MQ=255) gTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATAtt < 2:1948946/151‑1 (MQ=255) ttGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTc < 2:631416/150‑1 (MQ=255) aaaTCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGGGTACAGCCTAATGCGGGAGGCGAAATTCGccc > 2:1121495/1‑151 (MQ=255) aaTCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCt < 2:1369783/151‑1 (MQ=255) aaTCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGAAATTACCGGCGGGGCTGGGGAGGGTACAGCCTAATGCGGGAGGCGGTATTCGccc > 2:498647/1‑150 (MQ=255) ccGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTcc < 1:1743717/150‑1 (MQ=255) ccGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTcc < 2:1223975/150‑1 (MQ=255) cGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGGAAAGCTTTATGCGGGGGGGGGTATTTGCCCTcc > 2:509260/1‑149 (MQ=255) gACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCcgcg < 1:975992/151‑1 (MQ=255) gACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCcgcg < 1:1171056/151‑1 (MQ=255) aCGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGTACAGCTTAATGCGGGAGGCGATATTCGcccccccc > 2:579827/1‑147 (MQ=255) aCGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGGGTAAAGCTTAATGCGGGGGGGGATATTTGcccccc > 2:825488/1‑147 (MQ=255) aCGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGAGGCTTCAACCGCTGGAATTACCGGCGGGGGTTGGGGATGTAAAAATTAATGCGGGGGGGGGTAATTGcccccccc > 2:815328/1‑147 (MQ=255) gCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGAAGTGTGCAGCCTAATTTGTGGGGCGATATTCGCCCTCCGCGTg > 1:784287/1‑150 (MQ=255) cTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCCCCGCGTg > 1:25811/1‑149 (MQ=255) aTCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCa < 2:1579534/149‑1 (MQ=255) aTCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAg < 1:869278/150‑1 (MQ=255) cAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTGCAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGAc < 2:1833085/150‑1 (MQ=255) cAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACg < 1:845892/151‑1 (MQ=255) tCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGGGTACAGCTTTATGGGGGGGGCGGTATTCTCCCTCCGCCGGCAGACGa > 2:69285/1‑149 (MQ=255) tCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCCAAAACATTGTGCCCTGGCAGACGTGGCTTCAACCGTTGGTATTACCGGCGGGGCTGGGAAGGGTACAGCTTACTGCGGGAGGCGATTTTCGCCCTCCGCGTGCATActt < 2:275208/149‑3 (MQ=255) cGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGGGGGCAGCTTAAATCGGGGGGGGAAATTTGCCCTCcccggg > 2:1334043/1‑139 (MQ=255) cGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGc < 2:2147902/151‑1 (MQ=255) gCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGGGTGCAGCTTAAATCGGGGGGCGGATTTCGCCCCCCGCGTGGAGACGaa > 2:1652893/1‑148 (MQ=255) aaCTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGGGGGGAGGGTAAAGCCTTATGCGGGGGGCGGCATTTGCCCCCCCCGGGCCGAAGAAGAgg > 2:2109192/1‑150 (MQ=255) aCTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTc < 1:2007951/151‑1 (MQ=255) ggtggATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAgcgt < 1:1489877/151‑1 (MQ=255) gtggATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGTGTACAGCTTAATGCGGGGGGCGATATTCGCCCCCCGCGGGCAGACGAAGCGGGCAgcggg > 1:2133711/1‑149 (MQ=255) ggATTAAATCCATCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAgcgtgc‑g < 2:324595/151‑1 (MQ=255) gATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTTGGGAGTGTACAACCTTATGCGGGGGGCGGAATTTGCCCCCCCCGTGCAGACGAAgggggccgccggcg > 1:1030810/1‑140 (MQ=255) aaaTCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCa < 1:905513/151‑1 (MQ=255) gTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAgcgc < 1:1076989/151‑1 (MQ=255) ccGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGTGGACAGCTTAAAGCGGGGGGGGGTATTTGCCCTCCCCGTGGAGACGAAGGGGGCAGCGGGC‑GGTTTAAAACGCCAgg > 1:1586907/1‑151 (MQ=255) ccGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGGGTACAGCTTAATGCGGGGGGCGATATTTGCCCTCCCCGTGCAGACGAAGCGGGCAGCGTGC‑GGTTCAAAACGcc > 1:2146623/1‑148 (MQ=255) cGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGTGTACAGGTTAATGCGGGGGGGGATATTTGCCCCCCGCGTGCGGACGAAGCGGGCAGCGTGC‑GGTTTAAAGCGGCAgg > 1:782396/1‑150 (MQ=255) cGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCAGGGGAGTGTACAGCTTAATTTGGGGGGGGGTATTCCCCCTCCGCGGGCTGACGAAGAGGGCCGCGGGC‑GGTTTAAAgacgccg > 1:1327938/1‑143 (MQ=255) aaaGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGGGTGGACAGCTTAATGCGGGGGGCGGTATTCGCCCTCCGCGCGCAGACGAAGCGGGCAGCGTGG‑GTTTCAAAGCGCCAGGAtt > 2:878936/1‑148 (MQ=255) aaaGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATtgct < 1:498711/151‑1 (MQ=255) aGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGGGGACAGCTTAATGCGGGAGGCGAAATTCGCCCTCCGCGCGGAGACGAAGCGGGCAGCGGGC‑GGTTTAAAGCGCCCGGATtgt > 2:344577/1‑147 (MQ=255) aaaaCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGGAACGCTTAAAGCGGGGGGCGATATTTGCCCTCCGCGGGCCGGCGAAACGGGCCGCGGGG‑GGTTTAAAACGCCCGGAATTCTGGatat > 2:1442657/1‑151 (MQ=255) aaaaCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGGGTACAGCTTAAAGCGGGAGGGGATATTCGCCCTCCGCGTGGAGACGAAACGGGCAGCGTGC‑GGTTCAAAGAGCCAGGATTGCTGCata > 2:565050/1‑150 (MQ=255) aaaCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGTACAGCTTTATGCGGGGGGCGATATTTGCCCTCCCCGGGCCGACGAAGCGGGCAGCGGGC‑GTTTTCAAGCGCCAGGGCTGGTGCATAtt > 2:1817679/1‑151 (MQ=255) aaaCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGTACAGCCTAATGCGGGAGGGGGTATTCGCCCCCCGCGGGCAGACGAAGCGGGCAGCGGGC‑GGTTCAAAGAGCCCGGGGTTCTGCCTAtt > 2:1046062/1‑151 (MQ=255) aaCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTg < 1:1999107/151‑1 (MQ=255) aaCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTg < 1:872966/151‑1 (MQ=255) cATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGCGGGGAGGGTACAACCTAATGCGGGGGGCGAGATTTGCCCCCCGCGTGCAGACGAAGGGGGCAGCGGGC‑GGTTCCAAGCGCCCCGCTTGCTGCCTATTGt > 1:1068299/1‑150 (MQ=255) aTTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGGAAAGGCTAAAGGGGGGGGCGGGATTCGCCCTCCGCGTGCAGACGAAACGGGCAGCGGGC‑GGTTTAAAGCGCCAGGATTGCTTGATATTGt > 2:28254/1‑149 (MQ=255) aTTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCg < 2:1727239/151‑1 (MQ=255) aTTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGGGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGGCAGCGTGC‑GTTTCAAAACGCCAGGATTTCTGCCTAtttt > 1:649744/1‑147 (MQ=255) tgtgCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCgg < 1:1550852/150‑1 (MQ=255) gtgCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCggg < 1:1908437/150‑1 (MQ=255) gtgCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGc < 2:1673296/151‑1 (MQ=255) gtgCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGc < 2:741/151‑1 (MQ=255) gCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGTGGACAGCCTAAAGCGGGGGGCGATAATTGCCCTCCGCCGGCCGACGAAACGGGCCGCGGGC‑GGTTTAAAACGCCAGGGTTGCCGCCTATTTTTggg > 2:1737290/1‑148 (MQ=255) ccGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGGGTAAAGCTTAATGCGGGGGGCGATATTCGCCCTCCCCGGGCAGAAGAAGCGGGCAGCGGGC‑GGTTCAAAACGCCAGGATTGCTGCATATTTTCggggg > 1:1892004/1‑147 (MQ=255) cGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGTGTACAGCTTAATGCGGGAGGCGGTATTCGCCCTCCCCGTGCAGACGAAGTGGTCAGCGTGC‑GGTTTAAAACGCCAGGGTTGCTGCATATTTTCGGGCg > 1:41848/1‑148 (MQ=255) cGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGGGTACAGCTTAATGCGGGGGGCGATATTCGCCCCCCGCGTGCAGACGAAGCGGGCAGCGGGC‑GGTTCAAAGCGCCCGGGTTGCTGCATATTGTCggg > 1:692576/1‑146 (MQ=255) cGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTaa < 1:1741584/151‑1 (MQ=255) gTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGTGGAGAGCTTAATGGGGGAGGGGGTATTTGCCCTCCGCGTGGAGAAGAAGGGGGCAGCGGGG‑GGTTTAAAGCGCCAGGGTTGGTGGATATTGTCggggg > 2:710925/1‑145 (MQ=255) gTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAAc < 1:284394/151‑1 (MQ=255) tGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGGGGGTACAGCCTAATGCGGGAGGCGGTATTTGCCCCCCCCGTGGCGACGAAGCGGGCAGCGTGC‑GGTTCCCAGCGCCAGGGTTGCTGGATATTGTCggggggtac > 2:722491/1‑144 (MQ=255) ggCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAAcg < 2:1049838/150‑1 (MQ=255) gCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAAcggc < 2:1532262/151‑1 (MQ=255) aCGTGGCTTCAACCGCTGGAATTGCCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGAc < 2:1184417/151‑1 (MQ=255) cGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGTGTACAGCTTAATTCGGGAGGCGCTATTCTCCCTCCCCCTGCAGACGAAACGGTCCACGGGCGGTTTCCAACCCCAAGGA‑TGCTGCACATTTTTGGGGGTAAcggcgg > 1:392999/1‑148 (MQ=255) cGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACg < 1:1045497/151‑1 (MQ=255) gTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGt < 2:1732571/151‑1 (MQ=255) ggCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTaa < 1:2123078/151‑1 (MQ=255) ttCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGGGGCGATATTCGCCCTCCCCGGGCAGACGAAGCGGGCAGCGGGG‑GGTTCAAAGCGGCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGGCGTaa > 1:1785148/1‑148 (MQ=255) tCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCt < 1:601975/150‑1 (MQ=255) aCCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAg < 1:2089124/151‑1 (MQ=255) aCCGCTGGAATTACCGGCGGGGCTGAGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAg < 1:887240/151‑1 (MQ=255) cGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGaa < 1:891807/151‑1 (MQ=255) aaTTACCGGCGGGGCTGGGGAGTGTACAACTTAATGCGGGGGGGGATATTTGCCCTCCGCGTGCAGACGAAGCGGGGAGCGGGG‑GTTTCTAAGAGCCCGGGTTGCTGCATATTGTCGGGGGGGACGGGGGAGGGAAAATAAAGAAAAACt > 2:1436792/1‑150 (MQ=255) aaTTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTTCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTg < 2:532669/151‑1 (MQ=255) ggcggGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAag > 1:1886647/1‑149 (MQ=255) gcggGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGc > 1:2028804/1‑151 (MQ=255) ggggCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTg > 2:1773523/1‑151 (MQ=255) gggCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTgg < 1:1892314/151‑1 (MQ=255) ggCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTggg < 2:905922/151‑1 (MQ=255) gggAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGt < 1:1376489/150‑1 (MQ=255) gggAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGt < 1:693049/150‑1 (MQ=255) aaGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTgccg > 1:367781/1‑151 (MQ=255) | GATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGC‑GTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCG > NC_000913/213192‑213491 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |