Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,001,164 | 0 | A | C | 43.1% | 175.9 / 32.0 | 109 | T274P (ACC→CCC) | xdhA | xanthine dehydrogenase, molybdenum binding subunit |
Reads supporting (aligned to +/- strand): ref base A (54/8); new base C (1/46); total (55/54) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.30e-21 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 112 total aligned reads displayed.
CATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCGGGGGGGAATAAAGTCG > NC_000913/3001015‑3001314 | cATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAACTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAAc > 2:527328/1‑151 (MQ=255) gCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGGTTGGTGGCATTCCGGGGAAAGGTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTTCTCGCAAccc > 1:1625038/1‑150 (MQ=255) gCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAAccc < 1:964546/150‑1 (MQ=255) gCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAAccc < 1:1078871/150‑1 (MQ=255) gCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCg < 2:654060/151‑1 (MQ=255) cGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGt < 2:1940519/151‑1 (MQ=255) aCGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑cc > 2:1332883/1‑151 (MQ=255) ccattggctcttccATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑ccc > 2:446647/13‑151 (MQ=255) gAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCg > 1:740222/1‑151 (MQ=255) aGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGATTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑ccc > 2:1485509/1‑149 (MQ=255) catcaAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAATAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGGGAAAGGTT‑CCC‑TTAC‑CC‑CTGAAGA‑GTGTTTCCTCGCAACCCGTA‑cccccccc > 2:1123389/1‑149 (MQ=255) catcaAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCACCCCGTA‑CCCGCCa < 2:259446/150‑1 (MQ=255) tcaAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGc > 1:128690/1‑151 (MQ=255) aaaCCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCtt > 2:286801/1‑151 (MQ=255) ccATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTa < 1:263887/151‑1 (MQ=255) cATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTAc > 1:1018012/1‑151 (MQ=255) tttGGCGGTGGGGGTTTTGGAAATAAACAGGTGGTGCGGGAAGACCCAATGGCGGCTTTCCTGACCAGCAGGTTTGGCGGCATCCGGGTAAATTTTC‑CCC‑TTAG‑CC‑GTGAAGA‑GTTTTTCCTCGCACCCCGTA‑CCCGCCACGCTTTTAc < 2:1151379/149‑1 (MQ=255) tGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCAtt > 1:946/1‑151 (MQ=255) tGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCAtt > 1:727834/1‑151 (MQ=255) gTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGGGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCAtt > 2:1876294/1‑150 (MQ=255) cGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGAc > 2:2134892/1‑151 (MQ=255) gggggCGTTTTTGATAAAAAACGGGATGTCCTGGAAGAGCAAGTGGCGGCTTTCCTGACCAGCAAGCTTGGCGGCTTTCCGGTAAAATTTC‑CCC‑TTAG‑CC‑GGGAAGG‑TTTTTTCCTCGCACCCCTTC‑CCCGCCACGCTTTTACCATTGAc < 1:825799/147‑1 (MQ=255) gggggTTTTGTAAAAAAACAGGATGTACGGGAAGAGCAAGGGGGGGCATTCCTGACCAGCAGGCTGGGCGGCATCCCGGTAAAAGTTC‑CCC‑TTAG‑CC‑GGGAAGA‑GTGTTCCCCCCCACCCCTTC‑CCCGCCACGCTTTTACCATTGACGGGc < 1:1812044/148‑1 (MQ=255) ggggTTTTGGAAAAAACCAGGATGTACGGGAGGAGCAAGTGGCGGCTTCCCTGACCAGCAGGCTGGGCGGC‑TTCCGGGTAAATTTTCCCC‑TTAG‑CC‑GAGAAGG‑GTGTTTCCCCGAACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCa < 2:789698/149‑1 (MQ=255) gTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAAt > 2:683031/1‑151 (MQ=255) tttGGAAAAAAACGGGTGGTAGGGGAAGAGCAAAGGGGGGCTTTCCTAACCAGCAAGCTGGGCGGCTTCCGGGTAAAAGTTC‑CCC‑TTGG‑CG‑GGGAAGG‑TTGTTCCCCCGCACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATg < 1:268102/150‑1 (MQ=255) ttgggaaaaaaaCAGGATGTACGGGAAGACCAAAGGGCGGCATCCCTGCCCAGAAAGTTGGGCGGCATTCCGGTGAAATTTC‑CCC‑TTGG‑CC‑GTGAAGA‑GTTTTCCCCCGAACCCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATg < 1:290467/141‑1 (MQ=255) ttGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCACCCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATggg > 2:841741/1‑151 (MQ=255) gaaataaCCAGGATTAACGGGAGGAGCCAGTGGCGGCTTTCCTAACCAACAAGCTGGGCGGCTTTCGGGTGAATTTTC‑CCC‑TTAG‑CG‑GAGAAGG‑GTTTTCCCCCCCACCCGGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGc < 1:1530168/147‑1 (MQ=255) gTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGt > 1:1208706/1‑151 (MQ=255) aataaACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTg > 2:581187/1‑150 (MQ=255) aaaaaaCAGGTTGTGCGGGAAGAGCCAGTGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATCCCGGTAAAATTTC‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTCCCTCGCAACCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGa < 1:64911/148‑1 (MQ=255) aCAGGATGTATGGGAAGAGCCAAGGGGGGCTTTCCTGACCAGAAAGCTGGGCGGCTTCCGGGTAAAATTTC‑CCC‑TTCG‑CG‑GAGAAGA‑GTGTTCCCCCCCACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACcgc < 1:906632/151‑1 (MQ=255) ggATGTAGTGGAAGAGCCAGGGGCGGCATTCCTGACCAGCAAGCTTGGCGCCATCCCGGTGAAATTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCCCGCACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGa < 2:775332/150‑1 (MQ=255) tGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACgg > 2:57255/1‑150 (MQ=255) tGTACGGGAGGGGCAAAGGGCGGCTTCCCTGCCAAGCAAGCTGGGGGGCTTCCCGTTAAAAGTTC‑CCC‑TTAG‑CC‑GGGAAGG‑TTTTTCCCCCGCACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACgg < 1:995238/150‑1 (MQ=255) gTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGa > 2:1866765/1‑150 (MQ=255) gTACGGAAAGAGCAAAGGGCGGCTTCCCTGACCAGCAAGCTGGGCGGCATCCGGGTAAAAGTTC‑CCC‑TTAG‑CC‑GTAAGGG‑GTGTTCCCTCGCACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGa < 1:1996226/150‑1 (MQ=255) tACTGAAAGAGCAAAGGGCGCCATTCCCAACCGGCAAGTTGGGCGCCATTCCGGGGAATGTTT‑CCC‑TAAG‑CC‑GTGAGGT‑TTGTTCCCTCGCACCCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGa < 1:260850/149‑1 (MQ=255) acgggAAGAGCCAAGGGCGCCATCCCTGACCAGCAAGCTTGGCGGCTTTCCGGGAAAATTTC‑CCC‑TTGG‑CC‑GGAAAGA‑TTGTTTCCTCGCACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGa < 2:1999313/145‑1 (MQ=255) acggaaaGAGCCAAGGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTAAAATTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTCCCTCGCACCCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGa < 1:601104/143‑1 (MQ=255) aaGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGa > 2:356997/1‑150 (MQ=255) aaGAGCCAAGGGCGCCATTCCGACCCGGCAAGTTGGGCGGCATGCGGGTGAATTTTC‑CCC‑TTAG‑CG‑GGGAAGA‑GTGTTCCCCCGCACCCCGGC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACAtt < 2:1973578/148‑1 (MQ=255) agCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAgg > 1:1067167/1‑151 (MQ=255) tccAATGGCGGCCTTCCTGACAAGCAAGGTCGGTGGACTACCGGTGCCGGTTT‑CAC‑TTAG‑CC‑GTGAAGA‑GGGGTTGCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATCGACGGGCAAATGGGGGTGACCCGCGACggta > 2:141761/2‑138 (MQ=255) gCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGt > 1:1947128/1‑151 (MQ=255) ccAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGtt > 1:1050492/1‑151 (MQ=255) ccAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGtt > 1:1367839/1‑151 (MQ=255) caaagggcggcTTCCCTGACCAGCAAGCTTGGCGGCTTCCCGGTAAAATTTC‑CCC‑TTAG‑CC‑GTGAAGG‑GTTTTCCCCCGCACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAgg < 1:1015012/144‑1 (MQ=255) aagggcggcATCCCTGCCCAACAGGTTGGGCGCCTTCCGGGTAAAGGTTC‑CCC‑TTGG‑CG‑GAAAAGG‑GTTTTCCCCCGCACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGt < 2:2006505/145‑1 (MQ=255) aaTGGCGGTTTTCCAGCCCAGAAAGCTTGGGGGCTTCCGGGTAAAATTTC‑CCC‑TTCG‑CC‑GTGAAGG‑GTTTTCCCCCCCACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGtt < 1:1288573/149‑1 (MQ=255) gggggttttctggACCAAAAAGTTGGGCGGCA‑TCCGGGAAAATTTT‑CCCTTTAG‑CG‑GGAAAGT‑GTTTTCCCCCGAGCCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGt < 2:82800/139‑1 (MQ=255) ggcggcTTCCTTGCCCAGAAGGTTGGGCGGCTTCCCGGTGAAA‑TTT‑CCC‑TTTGCCC‑GTGAAGG‑GTGTTCCCCCGCACCCCGCC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTtata < 2:650069/149‑1 (MQ=255) cggcATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCt > 1:750106/1‑151 (MQ=255) cgccttcccTGACCGCCAGGCTTGGCGCCTTCCCGGT‑AAAGTTTCCCC‑TTGG‑CC‑TAGAAGT‑GTGTCCCCCCCCACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGt < 2:1616051/142‑1 (MQ=255) ggcTTTCCTGCCCAGCATGCTTGGCGGCTTCCCGGTAAAAGTTC‑CCT‑TTAG‑CC‑GTGAAGA‑TTTTTCCCCCCCACCCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCt < 1:2099103/150‑1 (MQ=255) ggcATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTg > 1:1851634/1‑151 (MQ=255) cATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTgg > 2:1385486/1‑150 (MQ=255) ttCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATg > 1:1423990/1‑151 (MQ=255) ccTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGtt > 1:1822469/1‑151 (MQ=255) gACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTg > 2:1132515/1‑151 (MQ=255) aCCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGt > 1:1015320/1‑151 (MQ=255) gCAAGCTTGGCGGCTTCCCGGTGAAATTTC‑CCC‑TTAG‑CC‑GTGAAGA‑TTTTTCCCTCGCACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTa < 1:1904916/150‑1 (MQ=255) aggtttGGCGGCATCCCGGTAAAATTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTTTTCCCCCGCACCCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTc < 1:1679142/142‑1 (MQ=255) ggcggcATTCCGGTAAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GGGTTTCCTCGCACCCCTTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGgc < 2:666808/150‑1 (MQ=255) ggcggcATGCGGGTAAAATTCC‑CCC‑TTAG‑CG‑GTGAAGT‑TTTTTCCCTCGCACCCGTTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGgc < 2:1301147/150‑1 (MQ=255) ggcggc‑TTTCGGGGAAAGTTT‑CCC‑TTCG‑AC‑CTGAAAATGTCTTTCCT‑TAAACCCGTACCCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAacac < 1:1350183/146‑1 (MQ=255) cggcATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCt > 1:832031/1‑151 (MQ=255) gcATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCtt > 1:1147437/1‑150 (MQ=255) aTTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATg > 2:559183/1‑151 (MQ=255) ttCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGc > 2:2183879/1‑151 (MQ=255) tCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGc > 2:1038604/1‑150 (MQ=255) ccgttaaaaTTT‑CCCTTTGG‑CC‑GTGAGGG‑GTTTTCCCCCGCACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATg < 2:298513/143‑1 (MQ=255) cGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCAtc > 2:336019/1‑151 (MQ=255) ggTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCAtct > 1:119600/1‑151 (MQ=255) gAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCAc > 1:2187899/1‑151 (MQ=255) aaaTTTC‑CCC‑TTGC‑CC‑GTGAAGA‑TTGTTCCCCCGCACCCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACg < 1:677979/151‑1 (MQ=255) aattt‑CCC‑TTAA‑CCGGTGAAGT‑GTTTTCCCCCGCACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACgg < 1:1069941/149‑1 (MQ=255) aGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACggg > 1:750256/1‑151 (MQ=255) tt‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCAc > 1:789399/1‑151 (MQ=255) ccc‑TTAG‑CC‑GTGAAGG‑GTTTTCCCCCCCACCCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCa < 1:527395/148‑1 (MQ=255) tAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATc > 2:542176/1‑151 (MQ=255) cc‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCt > 1:796123/1‑151 (MQ=255) ggagaagatttgtgccTCGCAACCCGCC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCtt < 2:1624451/137‑1 (MQ=255) gTGAAGA‑GTTTTCCCCCCCACCCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTc < 1:1041186/151‑1 (MQ=255) tGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCt > 2:1404563/1‑151 (MQ=255) agga‑gTGTTCCCCCGCACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCtt < 2:1918921/145‑1 (MQ=255) aaGT‑GTGTTCCCCCGCACCCCATC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCt < 2:343931/149‑1 (MQ=255) gtgtTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCgggg > 2:1131709/1‑151 (MQ=255) gtTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCgggggg > 1:91801/1‑151 (MQ=255) gtTCCCCCGCACCCCGCC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCggg < 2:1821848/148‑1 (MQ=255) ttcccTCCCACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCggg < 1:210063/144‑1 (MQ=255) ttCCCCGCACCCCGTC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCgggggg < 1:808485/149‑1 (MQ=255) ccTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCGGGGGGGAAt > 2:1147939/1‑151 (MQ=255) ccTCGCAACCCGCA‑CCCGCCACGCTTTTACCATTGACGGGCACATGGGCGTGAACCGCGACGGCACATTGAAAGGCTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCGGGGGGGa > 2:130419/1‑149 (MQ=255) ccGCACCCCGCC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCGGGGGGGAATaa < 2:1980754/150‑1 (MQ=255) cGCACCCGGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCGGGGGGGAATa < 1:1044760/149‑1 (MQ=255) cGCACCCCGCC‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCGGGGGGGAATaaa < 1:2135583/151‑1 (MQ=255) aaCCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCGGGGGGGAATAAAGTc > 2:351599/1‑151 (MQ=255) aaCCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCGGGGGGGAATAAAGTc > 1:82772/1‑151 (MQ=255) | CATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTT‑CCC‑TTAG‑CC‑GTGAAGA‑GTGTTTCCTCGCAACCCGTA‑CCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCGGGGGGGAATAAAGTCG > NC_000913/3001015‑3001314 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |