Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,4350CT46.4% 113.1 / 67.8 110intergenic (‑179/‑28)ttdR/ttdAtranscriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit
Reads supporting (aligned to +/- strand):  ref base C (10/49);  new base T (51/0);  total (61/49)
Fisher's exact test for biased strand distribution p-value = 1.23e-21
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

Only 100 of 112 total aligned reads displayed.

GTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAA  >  NC_000913/3206287‑3206583
                                                                                                                                                     |                                                                                                                                                    
gtgtATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCa                                                                                                                                                    <  1:1706205/151‑1 (MQ=255)
  gtATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGa                                                                                                                                                  <  1:2095620/151‑1 (MQ=255)
   tATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATTTTTCAGAc                                                                                                                                                 >  1:1391327/1‑151 (MQ=255)
    aTTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACa                                                                                                                                                <  2:1756077/151‑1 (MQ=255)
      ttCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACaa                                                                                                                                               >  1:1171951/1‑150 (MQ=255)
        cGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACaaa                                                                                                                                              >  1:311293/1‑149 (MQ=255)
        cGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATa                                                                                                                                            <  1:1188902/151‑1 (MQ=255)
         gCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATAc                                                                                                                                           <  1:2023055/151‑1 (MQ=255)
         gCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATAc                                                                                                                                           <  2:1019412/151‑1 (MQ=255)
             aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACaaaa                                                                                                                                       <  2:958285/151‑1 (MQ=255)
                aTTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATTTTTCAaaaaaaaaaaaaaa                                                                                                                                      >  2:868222/1‑149 (MQ=255)
                aTTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATTTTCCAGGAAAATTaaaaaa                                                                                                                                      >  2:1050548/1‑149 (MQ=255)
                   gCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCCGACAAAAACAAAAACttg                                                                                                                                  >  1:1615972/1‑148 (MQ=255)
                     cATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGt                                                                                                                               <  2:1625376/151‑1 (MQ=255)
                      aTTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGtt                                                                                                                              <  1:1344765/151‑1 (MQ=255)
                      aTTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGtt                                                                                                                              <  2:1238839/151‑1 (MQ=255)
                        tCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTTAGAAAAATACaaaaa                                                                                                                                      >  2:1750265/1‑141 (MQ=255)
                           cTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAAACAAATACAAAAAATGGAGTTGccct                                                                                                                         >  2:294612/1‑149 (MQ=255)
                             gCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCat                                                                                                                         <  2:734063/149‑1 (MQ=255)
                              ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GATTTTTTCATGCAAATACAAAAAATCGAGGTGcc                                                                                                                           >  1:776995/1‑146 (MQ=255)
                               tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATTTTTCAGAAAAATACAAAAAATGGAGTTGGCat                                                                                                                         >  2:274867/1‑147 (MQ=255)
                               tctGGCGCAAGATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCATGGTGGCAAAAAATATAAAACCACATTTTTAGTGGGCGTTTGTGGCGGTG‑AACGTTTTTTCACAAATAaaaaaaaagggggtgtcct                                                                                                                         >  2:1367759/1‑134 (MQ=255)
                                  ggCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCatgatg                                                                                                                     <  2:1066690/148‑1 (MQ=255)
                                  ggCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCAtgatga                                                                                                                    <  1:1964498/149‑1 (MQ=255)
                                  ggCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAg                                                                                                                   <  2:746244/150‑1 (MQ=255)
                                    cgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCCGACAAAAACAAAAAATGGGGTTGCCATGATGAGCg                                                                                                                 >  1:527646/1‑150 (MQ=255)
                                    cgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAAAACAAAAAATGGAGTTGCCATGATGAGCg                                                                                                                 >  1:10250/1‑150 (MQ=255)
                                    cgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGAAAAAAAAAAAAAATGGAGGTGCCATGATGAGCg                                                                                                                 >  1:197398/1‑150 (MQ=255)
                                      cAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGAAAAATACAAAAAATGGAGTTGCCATGATGAggg                                                                                                                 >  2:705411/1‑146 (MQ=255)
                                      cAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGaaa                                                                                                              <  2:626176/151‑1 (MQ=255)
                                       aaTATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAAAACAAAAAATGGAGTTGCCatgatggggg                                                                                                                 >  1:2148273/1‑143 (MQ=255)
                                            tcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATTTTTCATACAAATAAAAAAAAAGGAGTTGTCCTGATGAGCGAAAGta                                                                                                           >  1:1839442/1‑148 (MQ=255)
                                             cattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGtaataa                                                                                                       <  2:637201/151‑1 (MQ=255)
                                               ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCTCATTTTTAGTGGTAGTTTGTGGCGGAG‑AAATTTTTACGACAAAAATAAAAACAGGGGTTTCCATGATTAGAGGAAgc                                                                                                            >  2:65789/1‑143 (MQ=255)
                                                  ttATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCCGACAAAAAAAAAAAATGGAGTTGCCATGATGAGGGGAAAGAATAAACaa                                                                                                   >  1:1266993/1‑150 (MQ=255)
                                                  ttATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAAAACAAAAAATGGAGTTGCCATGATGAGCGAAAGTAATAAACaa                                                                                                   >  1:908866/1‑150 (MQ=255)
                                                    aTTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAg                                                                                                <  1:1053704/151‑1 (MQ=255)
                                                      tttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GATTTTTTCAGACAAAAAAAAAAAATTGAGGTGCCATGATGAGCGGAAGtaaaaaaaaaaa                                                                                                 >  1:1864857/1‑142 (MQ=255)
                                                      tttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAATAAAAAAAATGGAGTTGCCATGATGAGCGGAAGTAATAAacaaca                                                                                                 >  1:1280339/1‑148 (MQ=255)
                                                      tttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                                               <  1:1287588/150‑1 (MQ=255)
                                                       ttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAAAACAAAACAAAAAAAGGAGTTGGCATGTTGAGCGAAAATAATAAACaaaaaga                                                                                              >  2:1135364/1‑145 (MQ=255)
                                                        tCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCa                                                                                             <  2:1595478/150‑1 (MQ=255)
                                                         cgcgTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAg                                                                                            <  1:645464/150‑1 (MQ=255)
                                                         cgcgTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAg                                                                                            <  1:1119644/150‑1 (MQ=255)
                                                         cgcgTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGt                                                                                           <  1:740785/151‑1 (MQ=255)
                                                           cgTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGGCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGa                                                                                         <  1:2088609/151‑1 (MQ=255)
                                                           cgTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGa                                                                                         <  1:82228/151‑1 (MQ=255)
                                                            gTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAACCCAAAATAAAAAACAGGGGTTGCAATG‑GGGGGGTAAGTAAAAAGCAAAAggaaag                                                                                           >  2:36746/1‑144 (MQ=255)
                                                             ttGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAATAAAAAAAATGGAGTTGCCATGATGAGGGAAAGTAATAAGCAACAGGCAGTGaa                                                                                        >  1:1170789/1‑150 (MQ=255)
                                                              tGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAAt                                                                                       <  1:1405904/150‑1 (MQ=255)
                                                                aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCCGACAAAAACAAAAAATTGAGTTGGCATGATGAGCGAAAGAAATAAGCAACAAGCAGAGAATa                                                                                      >  1:17083/1‑149 (MQ=255)
                                                                 ttCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGCG‑AAATTTTTCAAAAAAATAAAAAAAATTGAGTTTCCCATATGAGAGAAAGGAATAAAAAACAAGAAGGGGATaa                                                                                     >  2:1901783/1‑149 (MQ=255)
                                                                  tCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGt                                                                                   <  1:549266/150‑1 (MQ=255)
                                                                  tCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGt                                                                                   <  1:1557220/150‑1 (MQ=255)
                                                                    aCGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGa                                                                                <  2:1013277/151‑1 (MQ=255)
                                                                      gAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAAAAAAAAAAATGGAGGTGCCATGAAGAGGGAAAGGAATAAACAAAAAGCAggggaaaaagtg                                                                                 >  1:1641893/1‑137 (MQ=255)
                                                                      gAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGGAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACa                                                                              <  2:537406/151‑1 (MQ=255)
                                                                       aaCTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAAAACAAAAACTGGAGGTGGCATGATGAGCGAAAGTAAAAAACAAAAAGCAGGGAaaaa                                                                                     >  1:81421/1‑143 (MQ=255)
                                                                          tGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAAAACAAAAAATGGAGTTGCCATGATGAGCGAAAAAAAAAAAAAAAAAGCAGGGAATaaaatga                                                                                >  1:145082/1‑140 (MQ=255)
                                                                           gTTAATTACATATTCACGGTGGCAGAGAATATAAAGCCACATTTTTAGTGGTAAGTTGTGGGTGTG‑AATTTGTCCAGATAAGTACATAAACGGAGGGGGGGAGGATGAGCGAAAGTAATAAGGAACAGGCGGTGAATAAGGTGACagag                                                                           <  2:1111218/149‑1 (MQ=255)
                                                                           gTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAATACAAAAACTGGAGTTGCCATGATGAGGGAAAGGAATAAACAACAGGCAGGGAATAAGTTGACa                                                                              >  1:66502/1‑146 (MQ=255)
                                                                              aaTTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATTTTTTAGACAAATACAAAAAATGGAGTTGCCATGATGAGCGAAAGTAATAAAAAACAAGCAGAGAATAAATTGACAGAGATTg                                                                       >  2:898976/1‑150 (MQ=255)
                                                                                 tACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGAAAAAAAAAAAAAATGGAGTTGGCCTGATGAGCGGAAGTAATAAACAAAAGGCCGTGAAAAAGATTACAGAGATTGTCg                                                                    >  2:1404422/1‑150 (MQ=255)
                                                                                  aCATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCCGACAAAAAAAAAAAAAGGGGGTGCCATGATGAGGGGAAGAAAAAAACAAAAAGCAGGGGATAAGATGACAGAGAATGTCGc                                                                   >  1:1074218/1‑150 (MQ=255)
                                                                                  aCATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGc                                                                   <  1:1152476/150‑1 (MQ=255)
                                                                                  aCATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGG‑AATTTTTCAAAAAAAATACAAAAAATTGAGTTTGCATGATGCGCGGAAGTAAAAAACAAAAAGCAAGGAAGAAGTTGTAAGAGATTGTc                                                                     >  2:699717/1‑148 (MQ=255)
                                                                                     tatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATTTTTCAAACAAATACAAAAAATGGAGGTTGCATGATGAGGGGAAGGAATAAGCAACAGGCAGTGAAAAAGTTTACAGAGATTGTCGCTaa                                                                >  2:2167469/1‑150 (MQ=255)
                                                                                                  aaaaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAAAAAAAAAAATTGAGTTGTCATGATGAGCGAAAGTAATAAACAAAAAGCAGTGAATAAATTGAAAGAGATTGTCGCTACATTTAACGcc                                                      >  2:291254/1‑147 (MQ=255)
                                                                                                   aaaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAAACAAATAAAAAAAATGGAGTTGCCATGATGAGCGAAAGGAATAAACAACAGGCAGGGAATAAGTTGACAGAGATTGTCGCTAACTTTTCCGcc                                                      >  1:2194699/1‑146 (MQ=255)
                                                                                                   aaaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGAAAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGAt                                                 <  1:129745/151‑1 (MQ=255)
                                                                                                   aaaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATTTTCCACACAAATAAAAAAAATGGAGTTGCCATGATGAGCGAAAGTAAAAAAAAAAAAGCAGTGAATAAGATGACAGAGAATGTCGCTAACTTTTCcccc                                                      >  2:1399538/1‑146 (MQ=255)
                                                                                                   aaaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGAG‑AATTTTTTCAAACAAATAAAAAAAATGGAGGTGGCATGATGAGGGGAAGTAACAAAAAACAGGCAGTGAAAAAATTGAAAGAGATTGTTGCTTACTTTTCCGccc                                                     >  2:501107/1‑146 (MQ=255)
                                                                                                    aaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGAAAAAAACAAAAAAAGGGGGTGGCATGATGAGGGAAAGTAAAAAACAAAAAGCAGTGAATAAATTGACAGAGAATGTCGCTAACTTTACCCCCCTGAtt                                                >  1:208854/1‑151 (MQ=255)
                                                                                                     aaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GATTTTTTCAGACAAATACAAAAAATCGAGTTGGGCTGTTGAGAGGAAATGAAAAAAAAAAAGGAATGGATAAAATGAAAGAGATTGGGGGTAACTTTACCGCCATGAttt                                               >  2:851128/1‑151 (MQ=255)
                                                                                                         ataAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAATACAAAAAATGGGGTTGCCATGATGAGCGGAAGAAATAAACAAAAGGCAGGGAATAAATTGACAGAGAATGTCGCTAACTTTACCGCCATGAttttt                                             >  1:1017971/1‑147 (MQ=255)
                                                                                                           aaacCCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAACCTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAATTTTACCGCCATGATTTCTAccc                                         <  1:1750870/151‑1 (MQ=255)
                                                                                                           aaaaCCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTAccc                                         <  1:335062/151‑1 (MQ=255)
                                                                                                             aaCCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATTTTTCAGAAAAAAAAAAAAAATGGGGTTGGCATGATGAGGGAAAAAAAAAAGAAACAAGGAGGGAAAAAGATGAAAGAGGTTGTTGCCAACTTTTCCGCCCTGAttttttacc                                         >  2:1847613/1‑143 (MQ=255)
                                                                                                                caaaTTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAGGAGCAAAATTAAAAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTACCTTTACCGCCATGATTTCTACCCGAAt                                     <  2:95676/147‑1 (MQ=255)
                                                                                                                  caTTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCCGACAAATAAAAAAAATGGGGGTGCCCTGATGAGCGGAAGGAATAAACAAAAGGCAGGGAATAAATTGGCAGAGATTGTCGCTAACTTTTACGCCCTGATTTTTACCCCAAAGcc                                  >  1:771803/1‑151 (MQ=255)
                                                                                                                   aTTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAATACAAAAAATGGGGGTTCCATGATGAGGGAAAGTAATAAACAACAAGCAGTGAATAAGTTGACAGAGAATGTCGCTAACTTTATCGCCATGATTTTTACCCGAATGcc                                  >  2:1952165/1‑150 (MQ=255)
                                                                                                                     ttttAGTGGTAGTTTGGGGCGGTG‑AATTTTTCCAGACAAAAACAAAAACTGGAGTTGCCAGGATGAGAAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtg                                <  1:2158680/150‑1 (MQ=255)
                                                                                                                      tttAGTGGTATTTTGTGGCGTTA‑ATTTTTTCCAGACAAATACAAAAACTAGATTTGCCATGATGAGAGAAACTAATAAGCAACAGGCAGTTAATATGTTACCAGAGATGTTCGCTAACTTTTCCGCCATGATTTCTACCCGAATGCCtga                               <  2:1630793/150‑1 (MQ=255)
                                                                                                                       ttAGTGGTATTTTGTGGCGGTG‑AATTTTTCCAGACAAAAACAAAAACTGGATTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGTTTGTCGCTAACTTTGCCGCCATGATTTCTACCCGAATGCCtgat                              <  2:2046202/150‑1 (MQ=255)
                                                                                                                          ggggagttttGTGGGGGTG‑AATTTTCCCAAAAAAAAAAAAAATCGGGGGTTGCCAGGAGGAGCGAAAGTAATAACAAACGGGCAGGAATTATGTTGACAAAAATGGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGAc                           <  2:1999864/143‑1 (MQ=255)
                                                                                                                               aGTTTGTGGCGGGG‑AATTTTTTCAGACAAATACAAAAACTGGAGGTGGCCTGATGAGCGAAAATAATAAACAAAAAGCAGTGAATAAGATGACAGAGATTGTTGCTAAATTTACCGCCATGATTTTTACCCGAATGCCTGATGACgtgg                       >  2:359015/1‑149 (MQ=255)
                                                                                                                                 tttGTGGGGGTG‑AATTTTTCCAGACAAATACAAAAACGGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtgg                       <  2:782847/147‑1 (MQ=255)
                                                                                                                                 tttGTGGCGGTA‑AATTTTTCAAGAAAAATAAAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGTTTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGtggtgg                    <  2:1880677/150‑1 (MQ=255)
                                                                                                                                 tttGGGGCGGTG‑AATTTTTCCAAACAAATACAAAAACTGAAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAATTTGACAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtggt                      <  2:850604/148‑1 (MQ=255)
                                                                                                                                  ttGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                   <  1:574041/150‑1 (MQ=255)
                                                                                                                                    gtgGCGGTG‑AATTTTGCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGGGAATAAGTTGACAGAAATTGTCGCAAACTTAACCGCCATGATATCTACCCGAATGCCTGATGACGTGGTGGATa                 <  2:1261168/150‑1 (MQ=255)
                                                                                                                                              aaTTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAAc        >  1:2021385/1‑150 (MQ=255)
                                                                                                                                              aaTTTTACAAGACAAATACAAAAAGGGGGGTGGCCAGGAGGAGGTAAATAAATAAGCAACGGGAATGGAATAGGTGGCGAGAGGTGTGGGCTATCTTTACCGCCATGATTTCTACCCGAATGCGTGATGACGTGGTGGATAAACTaaaa         <  2:81775/149‑1 (MQ=255)
                                                                                                                                               aTTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAAc        >  2:2004384/1‑149 (MQ=255)
                                                                                                                                                 ttttCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCt    >  2:334154/1‑151 (MQ=255)
                                                                                                                                                  tttCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCt    >  1:1570495/1‑150 (MQ=255)
                                                                                                                                                  ttcccAGACAAAAACAAAAACGGGAGTTGCCATGAGGAGCGAAAGTAATAAGCAACGGTGAGTAAATAAGTTGACAGAGATGGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCt    <  2:885254/147‑1 (MQ=255)
                                                                                                                                                   ttCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGTTAAACTAAAACAGCTa   >  1:1952044/1‑150 (MQ=255)
                                                                                                                                                   ttCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTa   <  1:2021176/150‑1 (MQ=255)
                                                                                                                                                     ccAGACAAAAAAAAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTaa  <  2:197371/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAA  >  NC_000913/3206287‑3206583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑